EY711062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_DANRE (Cryptochrome DASH OS=Danio rerio GN=cry-dash PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 5.486e-19 Identity = 53/163 (32.52%), Postives = 83/163 (50.92%), Query Frame = 2 Query: 44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHL--KFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 526 SP L G +S R ++ ++ +V + ++S + + R+Y ++++ Y + + L K W D F AW++GRTG P VDA MREL TG++ +R R V+SF K L L WR G ++F L+D D+ S+ W Y +G D R Sbjct: 256 SPWLALGCISPRYIYEQIKKYEVE------RTANQSTYWVIFELLWRDYFKFVALK--YGNRIFYMNGLQDKHVPWNTDMKMFDAWKEGRTGVPFVDANMRELALTGFMSNRGRQNVASFLTKDLGLDWRLGAEWFEYLLVDHDVCSNYGNWLYSAGIGNDPR 410 HSP 2 Score: 32.3426 bits (72), Expect = 5.486e-19 Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 1 Query: 556 EGYKFDPNGEYVRRWLPEL 612 +G +D NG+YVR+W+PEL Sbjct: 420 QGLDYDNNGDYVRQWVPEL 438 HSP 3 Score: 23.8682 bits (50), Expect = 5.486e-19 Identity = 14/35 (40.00%), Postives = 17/35 (48.57%), Query Frame = 3 Query: 633 DTH-PWKCPKSGLQAAGMELGSHYPFPLKRIGAPK 734 D H PW S L A + L YP P+ I AP+ Sbjct: 445 DVHTPWTLSNSALSHAQVSLNQTYPCPI--ITAPE 477
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_ARATH (Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 6.476e-19 Identity = 57/166 (34.34%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKF-----FSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 526 SP L FG +S R ++ V+ E + + S L + R+Y R++S S L HL W D+ F++WR +TGYPL+DA M+EL TG++ +R R +V SF V+ + L WR G ++F LLD D S+ W Y +G D R Sbjct: 333 SPWLAFGCISPRFIYEEVQ------RYEKERVANNSTYWVLFELIWRDYFRFLSIKCGNS-----LFHLGGPRNVQGKWSQDQKLFESWRDAKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPR 487 HSP 2 Score: 33.113 bits (74), Expect = 6.476e-19 Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 1 Query: 556 EGYKFDPNGEYVRRWLPELARLPTE 630 + +DP GEYV WL +L RLP E Sbjct: 497 QAQNYDPEGEYVAFWLQQLRRLPKE 521
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_NATPD (Cryptochrome DASH OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=cry PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.134e-19 Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 2 Query: 125 EGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 526 E + +E + + R++ ++ + + +P + W D F+ W G TG P VDA MREL TG++ +R R V+SF VL + WRWG YF L+D D+ S+ W Y +G D R Sbjct: 270 EDERVANEDTYWLVFELAWRDFFQFQFEKYGATFFKPGGIRERNIDWDRDRALFERWADGETGVPFVDANMRELNRTGYMSNRGRQNVASFLAGVLGIDWRWGAAYFEARLIDYDVASNWGNWAYQAGVGNDSR 403 HSP 2 Score: 31.187 bits (69), Expect = 7.134e-19 Identity = 11/20 (55.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 565 KFDPNGEYVRRWLPELARLP 624 ++D + EY+ WLPELA LP Sbjct: 415 RYDSDAEYITTWLPELAALP 434 HSP 3 Score: 25.409 bits (54), Expect = 7.134e-19 Identity = 11/29 (37.93%), Postives = 17/29 (58.62%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPLKRIGA 728 PW+ ++ + G+ELG YP P+ I A Sbjct: 441 PWQLSEAEQREYGVELGVDYPEPVVDIDA 469
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_CULQU (Cryptochrome-1 OS=Culex quinquefasciatus GN=cry PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.005e-18 Identity = 50/161 (31.06%), Postives = 78/161 (48.45%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWV-VDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGT 511 +S L FG +SVR + V +V N+ G + + REY MS ++P+ L W + W++GRTG+PL+DA MR+L A GWLH +R + ++F + L + W G+++F LLDAD A W ++S + Sbjct: 219 MSAALRFGCLSVRMFYWCVHDLFARVQANNQLKHPGGHHIT---GQLIWREYFYTMSVHNPHYAVMELNPICLNIPWYEAKDDSLDRWKEGRTGFPLIDAAMRQLMAEGWLHHILRNITATFLTRGGLWISWEAGVQHFLKYLLDADWSVCAGNWMWVSSS 376 HSP 2 Score: 33.8834 bits (76), Expect = 2.005e-18 Identity = 12/24 (50.00%), Postives = 18/24 (75.00%), Query Frame = 1 Query: 565 KFDPNGEYVRRWLPELARLPTEWI 636 + DP GEYV+R+LPEL + P ++ Sbjct: 396 RLDPKGEYVKRYLPELEKFPALYV 419 HSP 3 Score: 25.7942 bits (55), Expect = 2.005e-18 Identity = 11/37 (29.73%), Postives = 17/37 (45.95%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPLKRIG-APKCGVDQ 749 PWK P + G +G YP P+ + KC ++ Sbjct: 422 PWKAPPELQEQYGCVIGKDYPAPMVNLAEVNKCNANK 458
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_ANOGA (Cryptochrome-1 OS=Anopheles gambiae GN=Cry1 PE=2 SV=4) HSP 1 Score: 75.0998 bits (183), Expect = 3.352e-18 Identity = 52/173 (30.06%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHE---RPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 +S L FG +SVR + V +V ++ G + + REY MS +P+ E P+ ++ ++ ++ W++GRTG+P++DA MR+L A GWLH +R + ++F + L L W G+++F LLDAD A W ++S + AF+R+ Sbjct: 266 MSAALRFGCLSVRMFYWCVHDLFAKVQSNSQFKYPGGHHIT---GQLIWREYFYTMSVQNPHYGEMERNPICLNIPWYK--PEDDSLTRWKEGRTGFPMIDAAMRQLLAEGWLHHILRNITATFLTRGGLWLSWEEGLQHFLKYLLDADWSVCAGNWMWVSSS-----AFERL 428 HSP 2 Score: 35.039 bits (79), Expect = 3.352e-18 Identity = 12/24 (50.00%), Postives = 19/24 (79.17%), Query Frame = 1 Query: 565 KFDPNGEYVRRWLPELARLPTEWI 636 + DP G+YV+R+LPELA P +++ Sbjct: 443 RLDPKGDYVKRYLPELANYPAQFV 466 HSP 3 Score: 22.7126 bits (47), Expect = 3.352e-18 Identity = 16/65 (24.62%), Postives = 25/65 (38.46%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL-------KRIGAPKCGVDQTLSKCGHKETPSKPSF*KELRK 815 PWK + G +G YP P+ KR + + L G +PS +E+R+ Sbjct: 469 PWKASREQQIEYGCVIGEKYPAPMVDLAIVSKRNAHTMASLREKLVDGGSTPPHCRPSDIEEIRQ 533
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_BUCAI (Deoxyribodipyrimidine photo-lyase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=phrB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.632e-18 Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 2 Query: 182 REYSRYMSFNHP-YSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 RE+ ++ P S L+ K W+ + +F AW++G TG+P++DAGMR+L GW+H+R+R++ SSF VK L + WR G ++F L+D DL + GWQ+ + D + RI Sbjct: 282 REFYYHLLIGFPKISRSESLVTWEKEIHWINNIKHFNAWKEGNTGFPIIDAGMRQLNELGWMHNRLRMITSSFLVKNLLINWREGEEHFISNLIDGDLALNNGGWQWSASVGCDSVPYIRI 402
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_DROPS (Cryptochrome-1 OS=Drosophila pseudoobscura pseudoobscura GN=cry PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.074e-18 Identity = 57/171 (33.33%), Postives = 80/171 (46.78%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVR--IKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVV-DEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 +S HL FG +SVR+ + V + V A E + REY MS N+P W DE + WR G+TG+PL+D MR+L A GWLH +R V++F + L W G+K+F LLDAD A W ++S + AF+R+ Sbjct: 266 MSAHLRFGCLSVRRFYWSVHDLFENVQLAACVRGVQIEGGAHITGQLIWREYFYTMSVNNPNYDRMEGNEICLTIPWAKPDENLLQRWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEPGLKHFLKYLLDADWSVCAGNWMWVSSS-----AFERL 431 HSP 2 Score: 34.6538 bits (78), Expect = 4.074e-18 Identity = 13/24 (54.17%), Postives = 18/24 (75.00%), Query Frame = 1 Query: 565 KFDPNGEYVRRWLPELARLPTEWI 636 + DP G Y+RR++PEL LP E+I Sbjct: 446 RLDPEGVYIRRYVPELKNLPKEYI 469
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: PHR_YEAST (Deoxyribodipyrimidine photo-lyase, mitochondrial OS=Saccharomyces cerevisiae GN=PHR1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.293e-18 Identity = 46/134 (34.33%), Postives = 72/134 (53.73%), Query Frame = 2 Query: 143 DESVNLFLKSIGLREYSRYMSFNHPY-SHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541 + S F+K + R++ R+ N PY S P W + F+ W G TG P+VDA MR+L TG++++R R++ +SF K L + WRWG ++F L+D D S+ GW + S T D + + R+ Sbjct: 375 NSSTQNFIKEVAWRDFYRHCMCNWPYTSMGMPYRLDTLDIKWENNPVAFEKWCTGNTGIPIVDAIMRKLLYTGYINNRSRMITASFLSKNLLIDWRWGERWFMKHLIDGDSSSNVGGWGFCSSTGIDAQPYFRV 508 HSP 2 Score: 25.0238 bits (53), Expect = 5.293e-18 Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 565 KFDPNGEYVRRWLPEL 612 K+DP +V++W+PEL Sbjct: 517 KYDPQMIFVKQWVPEL 532
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_XENLA (Cryptochrome DASH OS=Xenopus laevis GN=cry-dash PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.624e-17 Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 2 Query: 44 SPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHL--KFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 526 +P L G VS R ++ + E + ++S + + R+Y R+++ Y L L K W D F AW++GRTG P VDA MREL TG++ +R R V+SF K L + WR G ++F L+D D+ S+ W Y +G D R Sbjct: 257 APWLALGCVSPRYIYEQIG------KYEKERTANQSTYWVIFELLWRDYFRFVALK--YGRRIFFLRGLQDKDIPWKRDPKLFDAWKEGRTGVPFVDANMRELAMTGFMSNRGRQNVASFLTKDLGIDWRMGAEWFEYLLVDYDVCSNYGNWLYSAGIGNDPR 411 HSP 2 Score: 32.3426 bits (72), Expect = 5.624e-17 Identity = 24/91 (26.37%), Postives = 38/91 (41.76%), Query Frame = 1 Query: 556 EGYKFDPNGEYVRRWLPELARLP-----TEWIPTHGNAQSLGSKLLEWNWGPITLFP--*NGLAPQNAG-WTKPFQNVGTKKHLPNLHFKR 804 +G +D G+Y+R W+PEL ++ T W ++ + L E PI + P + + AG W K + H P H R Sbjct: 421 QGLDYDSGGDYIRLWVPELQQIKGGDAHTPWALSNASLAHANLSLGETYPYPIVMAPEWSRHINQKPAGSWEKSARRGKGPSHTPKQHKNR 511
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_CHICK (Cryptochrome-1 OS=Gallus gallus GN=CRY1 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.490e-16 Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505 LSP+L FG +S R L K + K ++L+ + + RE+ + N+P + W + W +GRTG+P +DA M +L GW+H R V+ F + L + W GMK F + LLDAD +A W ++S Sbjct: 251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLS 401 HSP 2 Score: 35.039 bits (79), Expect = 3.490e-16 Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654 G + DPNG+Y+RR+LP L P ++I NA Sbjct: 419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450 HSP 3 Score: 26.1794 bits (56), Expect = 3.490e-16 Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL 713 PW P+S +AA +G +YP P+ Sbjct: 447 PWNAPESVQKAAKCVIGVNYPKPM 470 The following BLAST results are available for this feature:
BLAST of EY711062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >EY711062 ID=EY711062; Name=EY711062; organism=Citrus sinensis; type=EST; length=891bpback to top |