EY711062

Overview
NameEY711062
Unique NameEY711062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_SYLBO (Cryptochrome-1 OS=Sylvia borin GN=CRY1 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.847e-16
Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLS 401          

HSP 2 Score: 35.039 bits (79), Expect = 5.847e-16
Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DPNG+Y+RR+LP L   P ++I    NA
Sbjct:  419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450          

HSP 3 Score: 25.409 bits (54), Expect = 5.847e-16
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 3
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+S  +AA   +G +YP P+
Sbjct:  447 PWNAPESIQKAAKCIIGVNYPKPM 470          
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_ERIRU (Cryptochrome-1 OS=Erithacus rubecula GN=CRY1 PE=2 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 5.847e-16
Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLS 401          

HSP 2 Score: 35.039 bits (79), Expect = 5.847e-16
Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DPNG+Y+RR+LP L   P ++I    NA
Sbjct:  419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450          

HSP 3 Score: 25.409 bits (54), Expect = 5.847e-16
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 3
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+S  +AA   +G +YP P+
Sbjct:  447 PWNAPESIQKAAKCIIGVNYPKPM 470          
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_OSTTA (Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri GN=Ot01g06320 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.731e-16
Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHL-----KFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISG 508
            L+P L  G VS R V   +R        E  +  ++S    +  +  R++ ++ +  H        + HL     +  SW  DE   KAW+ G TGYPL+DA MREL ATG++ +R R  V+S+      + WR G  +F   LLD D  S+   W   +G
Sbjct:  283 LAPWLALGCVSPRHVVSEIR------RYESERVENKSTYWVIFELIWRDFFKFFALKHGNK-----IFHLDGTAGRRASWKRDEKILKAWKTGTTGYPLIDANMRELAATGFMSNRGRQNVASWLALDAGIDWRHGADWFEHHLLDYDTASNWGNWCAAAG 432          

HSP 2 Score: 32.7278 bits (73), Expect = 7.731e-16
Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1
Query:  568 FDPNGEYVRRWLPELARLPTEWI 636
            +DP GEY++ W+ ELA +P  +I
Sbjct:  450 YDPAGEYIKTWVKELAEVPAAYI 472          
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_MOUSE (Cryptochrome-1 OS=Mus musculus GN=Cry1 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.603e-15
Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 401          

HSP 2 Score: 35.039 bits (79), Expect = 4.603e-15
Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DPNG+Y+RR+LP L   P ++I    NA
Sbjct:  419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450          

HSP 3 Score: 22.3274 bits (46), Expect = 4.603e-15
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 3
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+   + A   +G +YP P+
Sbjct:  447 PWNAPEGIQKVAKCLIGVNYPKPM 470          
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_RAT (Cryptochrome-1 OS=Rattus norvegicus GN=Cry1 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.609e-15
Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 401          

HSP 2 Score: 35.039 bits (79), Expect = 4.609e-15
Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DPNG+Y+RR+LP L   P ++I    NA
Sbjct:  419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450          

HSP 3 Score: 22.3274 bits (46), Expect = 4.609e-15
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 3
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+   + A   +G +YP P+
Sbjct:  447 PWNAPEGIQKVAKCLIGVNYPKPM 470          
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_HUMAN (Cryptochrome-1 OS=Homo sapiens GN=CRY1 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.610e-15
Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 401          

HSP 2 Score: 35.039 bits (79), Expect = 4.610e-15
Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DPNG+Y+RR+LP L   P ++I    NA
Sbjct:  419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450          

HSP 3 Score: 22.3274 bits (46), Expect = 4.610e-15
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 3
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+   + A   +G +YP P+
Sbjct:  447 PWNAPEGIQKVAKCLIGVNYPKPM 470          
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_SPAJD (Cryptochrome-1 OS=Spalax judaei GN=CRY1 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 7.714e-15
Identity = 47/156 (30.13%), Postives = 71/156 (45.51%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV-KVLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            LSP+L FG +S R    L   K      +  K     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F     L + W  GMK F + LLDAD   +A  W ++S
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTGSDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 401          

HSP 2 Score: 35.039 bits (79), Expect = 7.714e-15
Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DPNG+Y+RR+LP L   P ++I    NA
Sbjct:  419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450          

HSP 3 Score: 22.3274 bits (46), Expect = 7.714e-15
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 3
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+   + A   +G +YP P+
Sbjct:  447 PWNAPEGIQKVAKCLIGVNYPKPM 470          
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_GLOVI (Cryptochrome DASH OS=Gloeobacter violaceus GN=cry PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.186e-15
Identity = 50/138 (36.23%), Postives = 69/138 (50.00%), Query Frame = 2
Query:  263 WVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDIHSLRVTSLTPMENMYDGGSLN----LPDCPLNGYPPMEMPKVW 664
            W  D   F+ WR G+TG+PLVDA MREL ATG++ +R R  V+SF  K L + W  G ++F   L+D D+ S+   W Y +G   D R F        R  ++      YD         LP+  L G PP  + + W
Sbjct:  318 WKEDWERFELWRTGQTGFPLVDANMRELAATGFMSNRGRQNVASFLTKNLGIHWHMGAEWFESRLIDYDVASNWGNWNYTAGVGNDARGF--------RFFNILKQARDYDPDGAYVKHWLPE--LAGLPPARVHEPW 445          

HSP 2 Score: 21.1718 bits (43), Expect = 8.186e-15
Identity = 9/24 (37.50%), Postives = 12/24 (50.00%), Query Frame = 3
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PWK      +  G+ LG  YP P+
Sbjct:  444 PWKLLPVEQKRFGVRLGVDYPQPV 467          
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_MACFA (Cryptochrome-1 OS=Macaca fascicularis GN=CRY1 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 9.982e-15
Identity = 46/156 (29.49%), Postives = 72/156 (46.15%), Query Frame = 2
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            LSP+L FG +S R    L   K      +  +     ++L+ + +  RE+    + N+P   +           W  +      W +GRTG+P +DA M +L   GW+H   R  V+ F  +  L + W  GMK F + LLDAD   +A  W ++S
Sbjct:  251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKRNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 401          

HSP 2 Score: 35.039 bits (79), Expect = 9.982e-15
Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DPNG+Y+RR+LP L   P ++I    NA
Sbjct:  419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450          

HSP 3 Score: 22.3274 bits (46), Expect = 9.982e-15
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 3
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+   + A   +G +YP P+
Sbjct:  447 PWNAPEGIQKVAKCLIGINYPKPM 470          
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_IDILO (Cryptochrome DASH OS=Idiomarina loihiensis GN=cry PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.067e-14
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 2
Query:  284 FKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDI 547
            F+ W  G T YP+V+A M++L ATG++ +R R +V+S FV  L L WR+G  YF   L+D D+ S+   WQY++G   D R   + ++
Sbjct:  325 FQKWCSGNTPYPIVNACMKQLNATGYMSNRGRQLVASCFVHELSLDWRYGAAYFEQQLIDYDVSSNWGNWQYLAGVGADPRGHRQFNL 412          

HSP 2 Score: 26.5646 bits (57), Expect = 1.067e-14
Identity = 11/36 (30.56%), Postives = 20/36 (55.56%), Query Frame = 1
Query:  535 PN*HPQF----EGYKFDPNGEYVRRWLPELARLPTE 630
            P  H QF    +  ++DP+ E++ RW  +L+  P +
Sbjct:  404 PRGHRQFNLEKQTERYDPDNEFIERWAGDLSGQPID 439          
The following BLAST results are available for this feature:
BLAST of EY711062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CRY1_SYLBO5.847e-1630.13Cryptochrome-1 OS=Sylvia borin GN=CRY1 PE=2 SV=1[more]
CRY1_ERIRU5.847e-1630.13Cryptochrome-1 OS=Erithacus rubecula GN=CRY1 PE=2 ... [more]
CRYD_OSTTA7.731e-1632.30Cryptochrome DASH, chloroplastic/mitochondrial OS=... [more]
CRY1_MOUSE4.603e-1530.13Cryptochrome-1 OS=Mus musculus GN=Cry1 PE=1 SV=1[more]
CRY1_RAT4.609e-1530.13Cryptochrome-1 OS=Rattus norvegicus GN=Cry1 PE=2 S... [more]
CRY1_HUMAN4.610e-1530.13Cryptochrome-1 OS=Homo sapiens GN=CRY1 PE=1 SV=1[more]
CRY1_SPAJD7.714e-1530.13Cryptochrome-1 OS=Spalax judaei GN=CRY1 PE=2 SV=1[more]
CRYD_GLOVI8.186e-1536.23Cryptochrome DASH OS=Gloeobacter violaceus GN=cry ... [more]
CRY1_MACFA9.982e-1529.49Cryptochrome-1 OS=Macaca fascicularis GN=CRY1 PE=2... [more]
CRYD_IDILO1.067e-1440.91Cryptochrome DASH OS=Idiomarina loihiensis GN=cry ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-D01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711062 ID=EY711062; Name=EY711062; organism=Citrus sinensis; type=EST; length=891bp
CCACGCGTCCGCCCACGCGTCCGGTGCTACAACCTCATTTCTCTCTCCAC
ATTTGCATTTTGGGGAGGTTAGTGTGAGGAAAGTCTTCCATCTTGTCCGC
ATCAAGCAGGTTTCATGGGCCAATGAAGGGAACAAGGCTGGTGATGAGAG
TGTGAACTTGTTTCTCAAGTCAATTGGTCTTCGGGAATATTCAAGGTACA
TGAGTTTTAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCACCTT
AAGTTCTTTTCTTGGGTTGTGGATGAGGGCTATTTTAAGGCATGGAGGCA
AGGTAGAACTGGTTATCCACTGGTGGATGCTGGCATGAGAGAGTTGTGGG
CCACTGGTTGGCTTCATGATCGGATACGAGTAGTAGTTTCTAGTTTCTTT
GTAAAAGTTCTACAGCTTCCATGGAGATGGGGGATGAAATATTTTTGGGA
TACCCTCTTGGATGCAGATTTAGAAAGTGATGCTCTTGGTTGGCAGTACA
TATCCGGTACTATCCCTGATGGCCGTGCTTTTGACCGAATTGACATCCAC
AGTTTGAGGGTTACAAGTTTGACCCCAATGGAGAATATGTACGACGGTGG
CTCCCTGAACTTGCCAGACTGCCCACTGAATGGATACCCACCCATGGAAA
TGCCCAAAGTCTGGGCTCCAAGCTGCTGGAATGGAACTGGGGTCCCATTA
CCCTTTTCCCCTAAAACGGATTGGCGCCCCAAAATGCGGGGTGGACCAAA
CCCTTTCAAAATGTGGGCACAAAGAAACACCTTCCAAACCTTCATTTTAA
AAGGAACTGAGGAAAGGCCTTGGAAACTCCCTTTGATTCACCCCCAATTG
TCCTTTCCCCCGGAAAATAAAAGGGGGAGAAACCCCCAACA
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