EY711062
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_SYLBO (Cryptochrome-1 OS=Sylvia borin GN=CRY1 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 5.847e-16 Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505 LSP+L FG +S R L K + K ++L+ + + RE+ + N+P + W + W +GRTG+P +DA M +L GW+H R V+ F + L + W GMK F + LLDAD +A W ++S Sbjct: 251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLS 401 HSP 2 Score: 35.039 bits (79), Expect = 5.847e-16 Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654 G + DPNG+Y+RR+LP L P ++I NA Sbjct: 419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450 HSP 3 Score: 25.409 bits (54), Expect = 5.847e-16 Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL 713 PW P+S +AA +G +YP P+ Sbjct: 447 PWNAPESIQKAAKCIIGVNYPKPM 470
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_ERIRU (Cryptochrome-1 OS=Erithacus rubecula GN=CRY1 PE=2 SV=2) HSP 1 Score: 64.6994 bits (156), Expect = 5.847e-16 Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505 LSP+L FG +S R L K + K ++L+ + + RE+ + N+P + W + W +GRTG+P +DA M +L GW+H R V+ F + L + W GMK F + LLDAD +A W ++S Sbjct: 251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLS 401 HSP 2 Score: 35.039 bits (79), Expect = 5.847e-16 Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654 G + DPNG+Y+RR+LP L P ++I NA Sbjct: 419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450 HSP 3 Score: 25.409 bits (54), Expect = 5.847e-16 Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL 713 PW P+S +AA +G +YP P+ Sbjct: 447 PWNAPESIQKAAKCIIGVNYPKPM 470
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_OSTTA (Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri GN=Ot01g06320 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.731e-16 Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHL-----KFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISG 508 L+P L G VS R V +R E + ++S + + R++ ++ + H + HL + SW DE KAW+ G TGYPL+DA MREL ATG++ +R R V+S+ + WR G +F LLD D S+ W +G Sbjct: 283 LAPWLALGCVSPRHVVSEIR------RYESERVENKSTYWVIFELIWRDFFKFFALKHGNK-----IFHLDGTAGRRASWKRDEKILKAWKTGTTGYPLIDANMRELAATGFMSNRGRQNVASWLALDAGIDWRHGADWFEHHLLDYDTASNWGNWCAAAG 432 HSP 2 Score: 32.7278 bits (73), Expect = 7.731e-16 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 568 FDPNGEYVRRWLPELARLPTEWI 636 +DP GEY++ W+ ELA +P +I Sbjct: 450 YDPAGEYIKTWVKELAEVPAAYI 472
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_MOUSE (Cryptochrome-1 OS=Mus musculus GN=Cry1 PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 4.603e-15 Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505 LSP+L FG +S R L K + K ++L+ + + RE+ + N+P + W + W +GRTG+P +DA M +L GW+H R V+ F + L + W GMK F + LLDAD +A W ++S Sbjct: 251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 401 HSP 2 Score: 35.039 bits (79), Expect = 4.603e-15 Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654 G + DPNG+Y+RR+LP L P ++I NA Sbjct: 419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450 HSP 3 Score: 22.3274 bits (46), Expect = 4.603e-15 Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL 713 PW P+ + A +G +YP P+ Sbjct: 447 PWNAPEGIQKVAKCLIGVNYPKPM 470
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_RAT (Cryptochrome-1 OS=Rattus norvegicus GN=Cry1 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 4.609e-15 Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505 LSP+L FG +S R L K + K ++L+ + + RE+ + N+P + W + W +GRTG+P +DA M +L GW+H R V+ F + L + W GMK F + LLDAD +A W ++S Sbjct: 251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 401 HSP 2 Score: 35.039 bits (79), Expect = 4.609e-15 Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654 G + DPNG+Y+RR+LP L P ++I NA Sbjct: 419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450 HSP 3 Score: 22.3274 bits (46), Expect = 4.609e-15 Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL 713 PW P+ + A +G +YP P+ Sbjct: 447 PWNAPEGIQKVAKCLIGVNYPKPM 470
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_HUMAN (Cryptochrome-1 OS=Homo sapiens GN=CRY1 PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 4.610e-15 Identity = 47/156 (30.13%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505 LSP+L FG +S R L K + K ++L+ + + RE+ + N+P + W + W +GRTG+P +DA M +L GW+H R V+ F + L + W GMK F + LLDAD +A W ++S Sbjct: 251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 401 HSP 2 Score: 35.039 bits (79), Expect = 4.610e-15 Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654 G + DPNG+Y+RR+LP L P ++I NA Sbjct: 419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450 HSP 3 Score: 22.3274 bits (46), Expect = 4.610e-15 Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL 713 PW P+ + A +G +YP P+ Sbjct: 447 PWNAPEGIQKVAKCLIGVNYPKPM 470
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_SPAJD (Cryptochrome-1 OS=Spalax judaei GN=CRY1 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 7.714e-15 Identity = 47/156 (30.13%), Postives = 71/156 (45.51%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV-KVLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505 LSP+L FG +S R L K + K ++L+ + + RE+ + N+P + W + W +GRTG+P +DA M +L GW+H R V+ F L + W GMK F + LLDAD +A W ++S Sbjct: 251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKKNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTGSDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 401 HSP 2 Score: 35.039 bits (79), Expect = 7.714e-15 Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654 G + DPNG+Y+RR+LP L P ++I NA Sbjct: 419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450 HSP 3 Score: 22.3274 bits (46), Expect = 7.714e-15 Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL 713 PW P+ + A +G +YP P+ Sbjct: 447 PWNAPEGIQKVAKCLIGVNYPKPM 470
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_GLOVI (Cryptochrome DASH OS=Gloeobacter violaceus GN=cry PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.186e-15 Identity = 50/138 (36.23%), Postives = 69/138 (50.00%), Query Frame = 2 Query: 263 WVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDIHSLRVTSLTPMENMYDGGSLN----LPDCPLNGYPPMEMPKVW 664 W D F+ WR G+TG+PLVDA MREL ATG++ +R R V+SF K L + W G ++F L+D D+ S+ W Y +G D R F R ++ YD LP+ L G PP + + W Sbjct: 318 WKEDWERFELWRTGQTGFPLVDANMRELAATGFMSNRGRQNVASFLTKNLGIHWHMGAEWFESRLIDYDVASNWGNWNYTAGVGNDARGF--------RFFNILKQARDYDPDGAYVKHWLPE--LAGLPPARVHEPW 445 HSP 2 Score: 21.1718 bits (43), Expect = 8.186e-15 Identity = 9/24 (37.50%), Postives = 12/24 (50.00%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL 713 PWK + G+ LG YP P+ Sbjct: 444 PWKLLPVEQKRFGVRLGVDYPQPV 467
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_MACFA (Cryptochrome-1 OS=Macaca fascicularis GN=CRY1 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 9.982e-15 Identity = 46/156 (29.49%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505 LSP+L FG +S R L K + + ++L+ + + RE+ + N+P + W + W +GRTG+P +DA M +L GW+H R V+ F + L + W GMK F + LLDAD +A W ++S Sbjct: 251 LSPYLRFGCLSCR----LFYFKLTDLYKKVKRNSSPPLSLYGQLLW-REFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLS 401 HSP 2 Score: 35.039 bits (79), Expect = 9.982e-15 Identity = 15/32 (46.88%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654 G + DPNG+Y+RR+LP L P ++I NA Sbjct: 419 GRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNA 450 HSP 3 Score: 22.3274 bits (46), Expect = 9.982e-15 Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = 3 Query: 642 PWKCPKSGLQAAGMELGSHYPFPL 713 PW P+ + A +G +YP P+ Sbjct: 447 PWNAPEGIQKVAKCLIGINYPKPM 470
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_IDILO (Cryptochrome DASH OS=Idiomarina loihiensis GN=cry PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.067e-14 Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 284 FKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDI 547 F+ W G T YP+V+A M++L ATG++ +R R +V+S FV L L WR+G YF L+D D+ S+ WQY++G D R + ++ Sbjct: 325 FQKWCSGNTPYPIVNACMKQLNATGYMSNRGRQLVASCFVHELSLDWRYGAAYFEQQLIDYDVSSNWGNWQYLAGVGADPRGHRQFNL 412 HSP 2 Score: 26.5646 bits (57), Expect = 1.067e-14 Identity = 11/36 (30.56%), Postives = 20/36 (55.56%), Query Frame = 1 Query: 535 PN*HPQF----EGYKFDPNGEYVRRWLPELARLPTE 630 P H QF + ++DP+ E++ RW +L+ P + Sbjct: 404 PRGHRQFNLEKQTERYDPDNEFIERWAGDLSGQPID 439 The following BLAST results are available for this feature:
BLAST of EY711062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY711062 ID=EY711062; Name=EY711062; organism=Citrus sinensis; type=EST; length=891bpback to top |