EY711062

Overview
NameEY711062
Unique NameEY711062
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY2_RAT (Cryptochrome-2 OS=Rattus norvegicus GN=Cry2 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 7.813e-14
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 2 
Query:  293 WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            W +G+TG+P +DA M +L   GW+H   R  V+ F  +  L + W  G++ F + LLDAD   +A  W ++S
Sbjct:  348 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLS 419

HSP 2 Score: 34.2686 bits (77), Expect = 7.813e-14
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 1 
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DP+G+Y+RR+LP+L   P+ +I    NA
Sbjct:  437 GRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNA 468

HSP 3 Score: 25.7942 bits (55), Expect = 7.813e-14
Identity = 10/24 (41.67%), Postives = 14/24 (58.33%), Query Frame = 3 
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+S  +AA   +G  YP P+
Sbjct:  465 PWNAPESVQKAANCIIGVDYPRPI 488
[Close]
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY2_HUMAN (Cryptochrome-2 OS=Homo sapiens GN=CRY2 PE=1 SV=2)

HSP 1 Score: 57.7658 bits (138), Expect = 1.306e-13
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 2 
Query:  293 WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            W +G+TG+P +DA M +L   GW+H   R  V+ F  +  L + W  G++ F + LLDAD   +A  W ++S
Sbjct:  349 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLS 420

HSP 2 Score: 34.6538 bits (78), Expect = 1.306e-13
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 1 
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DP+G+Y+RR+LP+L   P+ +I    NA
Sbjct:  438 GRRTDPSGDYIRRYLPKLKAFPSRYIYEPWNA 469

HSP 3 Score: 24.6386 bits (52), Expect = 1.306e-13
Identity = 10/24 (41.67%), Postives = 14/24 (58.33%), Query Frame = 3 
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+S  +AA   +G  YP P+
Sbjct:  466 PWNAPESIQKAAKCIIGVDYPRPI 489
[Close]
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY2_MOUSE (Cryptochrome-2 OS=Mus musculus GN=Cry2 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.307e-13
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 2 
Query:  293 WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            W +G+TG+P +DA M +L   GW+H   R  V+ F  +  L + W  G++ F + LLDAD   +A  W ++S
Sbjct:  348 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLS 419

HSP 2 Score: 34.2686 bits (77), Expect = 1.307e-13
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 1 
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DP+G+Y+RR+LP+L   P+ +I    NA
Sbjct:  437 GRRTDPSGDYIRRYLPKLKGFPSRYIYEPWNA 468

HSP 3 Score: 25.0238 bits (53), Expect = 1.307e-13
Identity = 10/24 (41.67%), Postives = 14/24 (58.33%), Query Frame = 3 
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+S  +AA   +G  YP P+
Sbjct:  465 PWNAPESVQKAAKCIIGVDYPRPI 488
[Close]
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY2_CHICK (Cryptochrome-2 OS=Gallus gallus GN=CRY2 PE=2 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 1.691e-13
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 2 
Query:  293 WRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYIS 505
            W +G+TG+P +DA M +L   GW+H   R  V+ F  +  L + W  G++ F + LLDAD   +A  W ++S
Sbjct:  339 WAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWESGVRVFDELLLDADFSVNAGSWMWLS 410

HSP 2 Score: 33.4982 bits (75), Expect = 1.691e-13
Identity = 14/32 (43.75%), Postives = 22/32 (68.75%), Query Frame = 1 
Query:  559 GYKFDPNGEYVRRWLPELARLPTEWIPTHGNA 654
            G + DP+G+YV+R+LP+L   P+ +I    NA
Sbjct:  428 GRRTDPSGDYVKRYLPKLKGFPSRYIYEPWNA 459

HSP 3 Score: 25.0238 bits (53), Expect = 1.691e-13
Identity = 10/24 (41.67%), Postives = 14/24 (58.33%), Query Frame = 3 
Query:  642 PWKCPKSGLQAAGMELGSHYPFPL 713
            PW  P+S  +AA   +G  YP P+
Sbjct:  456 PWNAPESVQKAAKCIIGVDYPKPM 479
[Close]
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_NEUCR (Putative cryptochrome DASH, mitochondrial OS=Neurospora crassa GN=B22I21.260 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 3.159e-13
Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 2 
Query:  302 GRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRI 541
            G TG  L+DA  REL  TG+  +R R  V+SF  K L++ WR+G +++   L+D D+ S+   WQY++G   D R   RI
Sbjct:  421 GTTGMGLIDASQRELIHTGYTSNRTRQNVASFLAKHLEIDWRYGAEWYEMLLVDYDVSSNWANWQYVAGVGNDPRGAARI 500

HSP 2 Score: 30.4166 bits (67), Expect = 3.159e-13
Identity = 10/25 (40.00%), Postives = 18/25 (72.00%), Query Frame = 1 
Query:  544 HPQFEGYKFDPNGEYVRRWLPELAR 618
            +P  + + +D +G YVR W+PE+A+
Sbjct:  502 NPVKQAFDYDKDGTYVRTWVPEVAK 526
[Close]
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRY1_DROME (Cryptochrome-1 OS=Drosophila melanogaster GN=cry PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.000e-13
Identity = 64/222 (28.83%), Postives = 99/222 (44.59%), Query Frame = 2 
Query:   41 LSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNL-----FLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFSWVV-DEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVK-VLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDIHSLRVTSLTPMENMYDGGSLNLPDCPLNGYPP--MEMPKVWAPSCW 679
            +S HL FG +SVR+ +  V      + N   +A    V +         +  REY   MS N+P               W   +E   ++WR G+TG+PL+D  MR+L A GWLH  +R  V++F  +  L   W  G+++F   LLDAD    A  W ++S +     AF+R+   SL    +   + +   G+       +  Y P  M +PK +    W
Sbjct:  266 MSAHLRFGCLSVRRFYWSVHDL---FKNVQLRACVRGVQMTGGAHITGQLIWREYFYTMSVNNPNYDRMEGNDICLSIPWAKPNENLLQSWRLGQTGFPLIDGAMRQLLAEGWLHHTLRNTVATFLTRGGLWQSWEHGLQHFLKYLLDADWSVCAGNWMWVSSS-----AFERLLDSSLVTCPVALAKRLDPDGTY------IKQYVPELMNVPKEFVHEPW 473
[Close]
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_VIBCH (Cryptochrome DASH OS=Vibrio cholerae GN=cry1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.355e-12
Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 2 
Query:  284 FKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 526
            F  W+ G T +P+V+A MR+L  TG++ +R R +V+S  V  L L WR+G  YF   L+D D+ S+   WQY++G   D R
Sbjct:  313 FLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPR 393

HSP 2 Score: 23.483 bits (49), Expect = 7.355e-12
Identity = 6/15 (40.00%), Postives = 11/15 (73.33%), Query Frame = 1 
Query:  556 EGYKFDPNGEYVRRW 600
            + + +DP GE+V +W
Sbjct:  403 QAHTYDPKGEFVAKW 417
[Close]
BLAST of EY711062 vs. ExPASy Swiss-Prot
Match: CRYD_VIBPA (Cryptochrome DASH OS=Vibrio parahaemolyticus GN=cry PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.560e-12
Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 2 
Query:  284 FKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGR 526
            F+ W+ G T YP+V+A M +L  TG++ +R R +V+S  V  L L WR+G  YF   L+D D+ S+   WQY++G   D R
Sbjct:  313 FQQWKNGTTPYPIVNACMHQLNHTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLIDYDVGSNWGNWQYLAGVGADPR 393

HSP 2 Score: 22.7126 bits (47), Expect = 9.560e-12
Identity = 6/11 (54.55%), Postives = 9/11 (81.82%), Query Frame = 1 
Query:  568 FDPNGEYVRRW 600
            +DPN E++ RW
Sbjct:  407 YDPNHEFIERW 417
The following BLAST results are available for this feature:
BLAST of EY711062 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CRY2_RAT7.813e-1437.50Cryptochrome-2 OS=Rattus norvegicus GN=Cry2 PE=2 S... [more]
CRY2_HUMAN1.306e-1337.50Cryptochrome-2 OS=Homo sapiens GN=CRY2 PE=1 SV=2[more]
CRY2_MOUSE1.307e-1337.50Cryptochrome-2 OS=Mus musculus GN=Cry2 PE=1 SV=1[more]
CRY2_CHICK1.691e-1337.50Cryptochrome-2 OS=Gallus gallus GN=CRY2 PE=2 SV=2[more]
CRYD_NEUCR3.159e-1341.25Putative cryptochrome DASH, mitochondrial OS=Neuro... [more]
CRY1_DROME6.000e-1328.83Cryptochrome-1 OS=Drosophila melanogaster GN=cry P... [more]
CRYD_VIBCH7.355e-1241.98Cryptochrome DASH OS=Vibrio cholerae GN=cry1 PE=1 ... [more]
CRYD_VIBPA9.560e-1241.98Cryptochrome DASH OS=Vibrio parahaemolyticus GN=cr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-D01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711062 ID=EY711062; Name=EY711062; organism=Citrus sinensis; type=EST; length=891bp
CCACGCGTCCGCCCACGCGTCCGGTGCTACAACCTCATTTCTCTCTCCAC
ATTTGCATTTTGGGGAGGTTAGTGTGAGGAAAGTCTTCCATCTTGTCCGC
ATCAAGCAGGTTTCATGGGCCAATGAAGGGAACAAGGCTGGTGATGAGAG
TGTGAACTTGTTTCTCAAGTCAATTGGTCTTCGGGAATATTCAAGGTACA
TGAGTTTTAACCATCCTTACAGTCATGAAAGGCCTCTTCTTGGGCACCTT
AAGTTCTTTTCTTGGGTTGTGGATGAGGGCTATTTTAAGGCATGGAGGCA
AGGTAGAACTGGTTATCCACTGGTGGATGCTGGCATGAGAGAGTTGTGGG
CCACTGGTTGGCTTCATGATCGGATACGAGTAGTAGTTTCTAGTTTCTTT
GTAAAAGTTCTACAGCTTCCATGGAGATGGGGGATGAAATATTTTTGGGA
TACCCTCTTGGATGCAGATTTAGAAAGTGATGCTCTTGGTTGGCAGTACA
TATCCGGTACTATCCCTGATGGCCGTGCTTTTGACCGAATTGACATCCAC
AGTTTGAGGGTTACAAGTTTGACCCCAATGGAGAATATGTACGACGGTGG
CTCCCTGAACTTGCCAGACTGCCCACTGAATGGATACCCACCCATGGAAA
TGCCCAAAGTCTGGGCTCCAAGCTGCTGGAATGGAACTGGGGTCCCATTA
CCCTTTTCCCCTAAAACGGATTGGCGCCCCAAAATGCGGGGTGGACCAAA
CCCTTTCAAAATGTGGGCACAAAGAAACACCTTCCAAACCTTCATTTTAA
AAGGAACTGAGGAAAGGCCTTGGAAACTCCCTTTGATTCACCCCCAATTG
TCCTTTCCCCCGGAAAATAAAAGGGGGAGAAACCCCCAACA
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