EY711058

Overview
NameEY711058
Unique NameEY711058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: CYB2_HANAN (Cytochrome b2, mitochondrial OS=Hansenula anomala GN=CYB2 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 4.080e-38
Identity = 87/214 (40.65%), Postives = 128/214 (59.81%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGR-----IPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 674
            G K + +TVD P LGRRE D+K +F         + QG D    D     G +  ++  ID SLSWKD+ ++++ITK+PI++KGV   ED              SNHG RQLDY  A +  L EV+   + R     I +F+DGGVRRGTDV KAL LGA G+ +GRP +Y++++ G+KGV + +++L++E E+ M L G   ++E+T + + T
Sbjct:  334 GMKGLFITVDAPSLGRREKDMKMKFEAD-----SDVQGDD---EDIDRSQGASRALSSFIDPSLSWKDIAFIKSITKMPIVIKGVQRKEDVLLAAEHGLQGVVLSNHGGRQLDYTRAPVEVLAEVMPILKERGLDQKIDIFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYAMSSYGDKGVTKAIQLLKDEIEMNMRLLGVNKIEELTPELLDT 539          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.737e-34
Identity = 85/210 (40.48%), Postives = 123/210 (58.57%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGR-----IPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRD 662
            G KA+ +TVD P LG+RE D+K +F+     T    + +    ++E+   G +  ++  ID SL+WKD++ L+  TKLPI++KGV   ED              SNHG RQLD+  A I  L E +   + R     + VF+DGGVRRGTDV KAL LGA G+ +GRP +Y+ +  G  GV + +E+LR+E E++M L G  S+ E+  D
Sbjct:  353 GVKALFVTVDAPSLGQREKDMKLKFSN----TKAGPKAMKKTNVEESQ--GASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPD 556          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_PSEE4 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas entomophila (strain L48) GN=lldD PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.346e-32
Identity = 81/234 (34.62%), Postives = 121/234 (51.71%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 686
            G K +  TVD P  G R  D  +  + P     + +Q +                DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + IGR  +Y+LA  GE GV+ +L +  +E  +AM L+G +S+ EITRD +V E  A
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGPNAPLRRVWQAMTHPQWALDVGLLGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALATHGEAGVKNLLALFEKEMRVAMVLTGAKSISEITRDSLVRELGA 381          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPK (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain KT2440) GN=lldD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 81/234 (34.62%), Postives = 120/234 (51.28%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 686
            G K +  TVD P  G R  D              +    T P +       G   DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + IGR  +Y+LA  G+ GV+ +LE+  +E  +AM L+G +S+ EITRD +V E  A
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDLKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVLTGAKSISEITRDSLVRELGA 381          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_PSEP1 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=lldD PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 81/234 (34.62%), Postives = 120/234 (51.28%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 686
            G K +  TVD P  G R  D              +    T P +       G   DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + IGR  +Y+LA  G+ GV+ +LE+  +E  +AM L+G +S+ EITRD +V E  A
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDLKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVLTGAKSISEITRDSLVRELGA 381          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPG (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain GB-1) GN=lldD PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.660e-31
Identity = 81/234 (34.62%), Postives = 120/234 (51.28%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREAD--------------IKNRFTLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 686
            G K +  TVD P  G R  D              +    T P +       G   DLG + +   N +GLA Y+       D S+SWKD++W++     P+++KG+L A+D              SNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + IGR  +Y+LA  G+ GV+ +LE+  +E  +AM L+G +S+ EITRD +V E  A
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGKNGPLRRVLQAMTHPEWAWDVGVMGRPHDLGNISKYRGNPTGLADYIGWLGNNFDPSISWKDLEWIREYWDGPMIIKGILDADDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDLKILADSGIRSGLDVVRMIALGADTVLIGRAFLYALAVHGQAGVKNLLELFEKEMRVAMVLTGAKSISEITRDSLVRELGA 381          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA7 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain PA7) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.699e-31
Identity = 79/234 (33.76%), Postives = 118/234 (50.43%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 686
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + +GR  VY+LAA GE GVR +LE++ +E  +AM L+G +S+ EI+ D +V E  A
Sbjct:  148 GVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISTYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWNGPMVIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRELGA 381          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_ERWCT (L-lactate dehydrogenase [cytochrome] OS=Erwinia carotovora subsp. atroseptica GN=lldD PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.699e-31
Identity = 79/229 (34.50%), Postives = 119/229 (51.97%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 671
            G K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SW+D+ W++   K P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA G+ +GR  VY+LAA GE GV  +L ++ +E  +AM L+G +S+ +IT D +V
Sbjct:  148 GVKTLVFTVDMPTPGARYRDAHSGMSGPNAAARRMLQAVTHPQWAWDVGLNGKPHDLGNVSAYRGKPTTLEDYIGWLAANFDPSISWQDLAWIREFWKGPMIIKGILDPEDAKEAVRFGADGIVVSNHGGRQLDGVLSTAHALPAIADAVKGDITILADSGIRSGLDVVRMIALGADGVMLGRAFVYALAAAGEAGVVNLLNLIEKEMRVAMTLTGAKSIADITSDSLV 376          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAE (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.831e-31
Identity = 79/234 (33.76%), Postives = 118/234 (50.43%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 686
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + +GR  VY+LAA GE GVR +LE++ +E  +AM L+G +S+ EI+ D +V E  A
Sbjct:  148 GVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISAYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRELGA 381          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_PSEA8 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain LESB58) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.831e-31
Identity = 79/234 (33.76%), Postives = 118/234 (50.43%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 686
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + +GR  VY+LAA GE GVR +LE++ +E  +AM L+G +S+ EI+ D +V E  A
Sbjct:  148 GVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISAYRGNPTGLEDYIGWLGANFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRELGA 381          
The following BLAST results are available for this feature:
BLAST of EY711058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
CYB2_HANAN4.080e-3840.65Cytochrome b2, mitochondrial OS=Hansenula anomala ... [more]
CYB2_YEAST2.737e-3440.48Cytochrome b2, mitochondrial OS=Saccharomyces cere... [more]
LLDD_PSEE43.346e-3234.62L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEPK1.271e-3134.62L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEP11.271e-3134.62L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEPG1.660e-3134.62L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEA73.699e-3133.76L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_ERWCT3.699e-3134.50L-lactate dehydrogenase [cytochrome] OS=Erwinia ca... [more]
LLDD_PSEAE4.831e-3133.76L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEA84.831e-3133.76L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-C08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711058 ID=EY711058; Name=EY711058; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGGTGGTTGCTTAGCTTGTGAGAAGGGCTGAAAGAGCCGGA
TTCAAGGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGA
AGCTGACATCAAAAACAGATTCACTCTACCACCATTTTTGACATTAAAGA
ATTTTCAGGGTTTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGG
CTTGCTGCCTATGTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGA
CGTGAAGTGGCTTCAAACAATCACCAAATTGCCAATTCTGGTGAAGGGTG
TACTCACAGCAGAGGATGCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGG
ATTATTGTATCCAATCATGGAGCTCGTCAACTTGACTATGTCCCTGCCAC
TATCATGGCCCTGGAAGAGGTTGTGAAAGCTACTCAGGGGCGTATTCCTG
TGTTCTTGGATGGTGGTGTTAGGCGAGGAACTGATGTCTTCAAAGCCTTG
GCACTTGGAGCCTCTGGTATATTTATTGGACGACCAGTGGTGTACTCATT
GGCAGCTGAGGGAGAGAAAGGCGTTAGAAGAGTACTCGAGATGCTGCGTG
AAGAATTTGAGCTAGCAATGGCACTAAGTGGTTGCCGCTCACTCAAAGAG
ATTACTCGTGATCACATCGTCACTGAATGGGATGCTTCTCTCCCTCGTCG
GGTCCCAGGGTATAGATACGTGCATGCAAATAGAAGAAAGAGCAAAAATT
TGGTACTTTCTATTACTTTCTTTTCTTGGAGACCTAGTCATGTTTAATTG
ATCTGAATATTTTTAGCCTCTGTTATGAGGATATTGCTACTTCTGCCCTT
CCCTGGTAAAAAAAAAAAAAGGCGGCCGCTCTAAA
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