EY711058

Overview
NameEY711058
Unique NameEY711058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_HAEI8 (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain 86-028NP) GN=lldD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.362e-25
Identity = 71/229 (31.00%), Postives = 115/229 (50.22%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAYVAGQI-------------DRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 671
            G   +  TVD P  G R  D+ +  + P     +  QG        D+G   + +  G ++ Y+  QI             D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G +GV  +L++ ++E  +AM L+  R++ +I  + +V
Sbjct:  148 GCSTLVFTVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKIIADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMRVAMTLTSNRTIVDIKPEALV 376          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_ACTPJ (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=lldD PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.033e-25
Identity = 55/154 (35.71%), Postives = 88/154 (57.14%), Query Frame = 3
Query:  210 YVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 671
            ++    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD   ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G+ GV  +L++ ++E  +AM L+  + + +ITRD +V
Sbjct:  223 WLGENFDPSISWKDLEWIRDFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGALSSARALPSIADAVKGDIKILADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGKAGVENMLDIFKKEMHVAMTLTSNQKISDITRDALV 376          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_ACTP7 (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=lldD PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.033e-25
Identity = 55/154 (35.71%), Postives = 88/154 (57.14%), Query Frame = 3
Query:  210 YVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 671
            ++    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD   ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G+ GV  +L++ ++E  +AM L+  + + +ITRD +V
Sbjct:  223 WLGENFDPSISWKDLEWIRDFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGALSSARALPSIADAVKGDIKILADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGKAGVENMLDIFKKEMHVAMTLTSNQKISDITRDALV 376          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_ACTP2 (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=lldD PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.033e-25
Identity = 55/154 (35.71%), Postives = 88/154 (57.14%), Query Frame = 3
Query:  210 YVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 671
            ++    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD   ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G+ GV  +L++ ++E  +AM L+  + + +ITRD +V
Sbjct:  223 WLGENFDPSISWKDLEWIRDFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGALSSARALPSIADAVKGDIKILADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGKAGVENMLDIFKKEMHVAMTLTSNQKISDITRDALV 376          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: YKN3_SCHPO (Uncharacterized lactate 2-monooxygenase PB1A11.03 OS=Schizosaccharomyces pombe GN=SPAPB1A11.03 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.664e-23
Identity = 79/229 (34.50%), Postives = 114/229 (49.78%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMD---------------EANDSGLAAYVAGQIDRSLS--WKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSL--KEITRDHIVTE 677
            G + + +T+DT  LG R +D+ N +   PFL   +  G++ G  D               E N    A   AG +   +S  W+D+K+L+     PI++KG++   D              SNHG RQ D   A++  L ++V A   ++ V  D GVR G D+ KALALGA  + IGRP VY LA EG  GV  V+  L  + EL + LSG  S+  K++ RD +  E
Sbjct:  181 GCRVLIVTLDTFILGWRPSDMDNGYD--PFLNPDSI-GVEHGFSDPVFRKQFKEKHGVEVEENMLEAAKEFAGIVFPGISHDWEDLKFLRKHWDGPIVLKGIMNVPDAKKAVEYGMQGIVVSNHGGRQQDGGVASLTMLPKIVDAVGDKLDVLFDSGVRSGADIAKALALGAKMVLIGRPYVYGLALEGSSGVSHVIRCLLGDLELTLHLSGIVSVKPKDLNRDVLYKE 406          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD1_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 1 OS=Mycobacterium tuberculosis GN=lldD1 PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.842e-23
Identity = 63/176 (35.80%), Postives = 92/176 (52.27%), Query Frame = 3
Query:  129 PPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 656
            PP L + N      G+  E      AAY         +W+D+ WL+ +   P ++KGV+  +D              SNHG   LD  PA+I AL  V  A   ++ V LDGG+RRG+DV KA+ALGA  + IGR  ++ LAA G+ GV  VL++LR   + A+   G  S+ +++
Sbjct:  204 PPDLRVPN-----QGRRGEPGPPFFAAYGEWMATPPPTWEDIGWLRELWGGPFMLKGVMRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRALPAVSAAVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYLWGLAANGQAGVENVLDILRGGIDSALMGLGHASVHDLS 374          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.840e-22
Identity = 67/223 (30.04%), Postives = 103/223 (46.19%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNF----------------QGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 668
            GF  + +TVD P  G R  D++N  ++PP LTL+                  + L    +D    + +  Y+    D SL++ D+ W+++     ++VKG+ T +D              SNHG RQLD  P     L  V +       + +D G+  G D+  A+ALGA    IGR  +Y L A GE GV R +E+L+      M L G   L+E++  H+
Sbjct:  180 GFDTMLVTVDVPVAGARLRDVRNGMSIPPALTLRTVLDAMGHPRWWFDLLTTEPLAFASLDRWPGT-VGEYLNTVFDPSLTFDDLAWIKSQWPGKLVVKGIQTLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEELSPRHV 401          
The following BLAST results are available for this feature:
BLAST of EY711058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_HAEI81.362e-2531.00L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_ACTPJ3.033e-2535.71L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]
LLDD_ACTP73.033e-2535.71L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]
LLDD_ACTP23.033e-2535.71L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]
YKN3_SCHPO1.664e-2334.50Uncharacterized lactate 2-monooxygenase PB1A11.03 ... [more]
LLDD1_MYCTU4.842e-2335.80Putative L-lactate dehydrogenase [cytochrome] 1 OS... [more]
LLDD2_MYCTU1.840e-2230.04Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-C08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711058 ID=EY711058; Name=EY711058; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGGTGGTTGCTTAGCTTGTGAGAAGGGCTGAAAGAGCCGGA
TTCAAGGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGA
AGCTGACATCAAAAACAGATTCACTCTACCACCATTTTTGACATTAAAGA
ATTTTCAGGGTTTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGG
CTTGCTGCCTATGTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGA
CGTGAAGTGGCTTCAAACAATCACCAAATTGCCAATTCTGGTGAAGGGTG
TACTCACAGCAGAGGATGCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGG
ATTATTGTATCCAATCATGGAGCTCGTCAACTTGACTATGTCCCTGCCAC
TATCATGGCCCTGGAAGAGGTTGTGAAAGCTACTCAGGGGCGTATTCCTG
TGTTCTTGGATGGTGGTGTTAGGCGAGGAACTGATGTCTTCAAAGCCTTG
GCACTTGGAGCCTCTGGTATATTTATTGGACGACCAGTGGTGTACTCATT
GGCAGCTGAGGGAGAGAAAGGCGTTAGAAGAGTACTCGAGATGCTGCGTG
AAGAATTTGAGCTAGCAATGGCACTAAGTGGTTGCCGCTCACTCAAAGAG
ATTACTCGTGATCACATCGTCACTGAATGGGATGCTTCTCTCCCTCGTCG
GGTCCCAGGGTATAGATACGTGCATGCAAATAGAAGAAAGAGCAAAAATT
TGGTACTTTCTATTACTTTCTTTTCTTGGAGACCTAGTCATGTTTAATTG
ATCTGAATATTTTTAGCCTCTGTTATGAGGATATTGCTACTTCTGCCCTT
CCCTGGTAAAAAAAAAAAAAGGCGGCCGCTCTAAA
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