EY711058

Overview
NameEY711058
Unique NameEY711058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_CITK8 (L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.831e-31
Identity = 78/237 (32.91%), Postives = 120/237 (50.63%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     + +Q                  DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L+++ +E ++AM L+G +S+ EI+RD +V E   SLP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAALRRYWQAATHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATAGQAGVANLLDLIEKEMKVAMTLTGAKSISEISRDSLVQELGKSLP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.076e-30
Identity = 78/238 (32.77%), Postives = 121/238 (50.84%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFL-------TLKNFQGLDLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPR 698
            G + +  TVD P  G R  D  +  + P           L  F   D+G M   +D G ++AY             +    D S+ WKD++W++   K P+++KG+L  ED              SNHG RQLD V ++  A+  +  A +G + +  D G+R G DV + LA GA G+ +GR  VY+LAA G  GV  +L+++ +E  +AM L+G R++ +I+RD +V E +  L R
Sbjct:  148 GIRTLVFTVDMPVPGARYRDAHSGMSGPNAAFRRMVQAVLHPFWAYDVGLMGTPHDLGNVSAYRKEKTSLEDYVGWLGNNFDPSIGWKDLEWIREFWKGPMVIKGILDPEDARDAVRFGADGIIVSNHGGRQLDGVLSSARAMPAIADAVKGEMTLLADSGIRSGLDVVRMLAQGADGVLLGRAFVYALAAAGRAGVENLLDIIAKEMRVAMTLTGARAISDISRDSLVREIERPLAR 385          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_PSEAB (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=lldD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.076e-30
Identity = 78/234 (33.33%), Postives = 118/234 (50.43%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 686
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S++WKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +ALGA  + +GR  VY+LAA GE GVR +LE++ +E  +AM L+G +S+ EI+ D +V E  A
Sbjct:  148 GVTTLVFTVDMPVPGARYRDAHSGMSGPYAAPRRILQAMTHPAWAWDVGLLGKPHDLGNISAYRGNPTGLEDYIGWLGANFDPSIAWKDLEWIREFWDGPMVIKGILDPEDARDAVKFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGELAILADSGIRTGLDVVRMIALGADSVLLGRAFVYALAAAGEAGVRNLLELIEKEMRVAMVLTGAKSIGEISADSLVRELGA 381          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_ESCF3 (L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.076e-30
Identity = 77/237 (32.49%), Postives = 121/237 (51.05%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EI++D +V E D +LP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLNLIEKEMKVAMTLTGAKSISEISQDSLVQELDKALP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_SALCH (L-lactate dehydrogenase [cytochrome] OS=Salmonella choleraesuis GN=lldD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.836e-30
Identity = 77/237 (32.49%), Postives = 121/237 (51.05%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P    L+ +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L+++ +E ++AM L+G +++ EI+ D +V E   SLP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMLRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKTISEISGDSLVQELGKSLP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.836e-30
Identity = 80/229 (34.93%), Postives = 118/229 (51.53%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQG-------LDLGKMDEANDSG-----------LAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 671
            G   +  TVD P  G R  D  +  +     T +  Q        LD+G + + +D G           LA Y+   A   D S+SWKD++W+++  K P+++KG+L   D              SNHG RQLD V ++  AL  +  A    + V  D G+R G DV + LALGA G+ +GR   Y+LA  G+ GV  +L+++ +E  +AMAL+G RS+ EITRD +V
Sbjct:  148 GINTLIFTVDMPVPGARYRDAHSGMSGRSGPTRRVLQAMVHPRWALDVGLLGKPHDLGNISTYRGKPTNLADYIGWLAANFDPSISWKDLEWIRSFWKGPMIIKGILDPVDARDAVAFGADGIVVSNHGGRQLDGVLSSARALPAIADAVGDDLTVLADSGIRTGLDVVRMLALGAKGVLLGRAFAYALATHGQAGVANLLDLIEKEMRVAMALTGARSIAEITRDSLV 376          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.398e-30
Identity = 73/229 (31.88%), Postives = 118/229 (51.53%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG--------------LAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 671
            G K +  TVD P  G R  D+ +  + P     +  Q +       D+G + + +D G                 ++    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V +T+ AL  +  A +G + + +D G+R G DV + LALGA    +GR  +Y+LAA+G  GV  +L++  +E  +AM L+G +S+ E++RD +V
Sbjct:  148 GVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLGNISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGILDTEDAKDAVRFGADGIVVSNHGGRQLDGVLSTVQALPAIADAVKGDLKILVDSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAKSIAELSRDSLV 376          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCH (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae GN=lldD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.398e-30
Identity = 73/229 (31.88%), Postives = 118/229 (51.53%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG--------------LAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 671
            G K +  TVD P  G R  D+ +  + P     +  Q +       D+G + + +D G                 ++    D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V +T+ AL  +  A +G + + +D G+R G DV + LALGA    +GR  +Y+LAA+G  GV  +L++  +E  +AM L+G +S+ E++RD +V
Sbjct:  148 GVKNLVFTVDMPVPGARYRDMHSGMSGPNAAMRRVLQAMAHPSWAWDVGLLGKPHDLGNISKYRGSPTKLEDYIGWLGANFDPSISWKDLEWIRDFWDGPMIIKGILDTEDAKDAVRFGADGIVVSNHGGRQLDGVLSTVQALPAIADAVKGDLKILVDSGIRTGLDVVRMLALGADCTMLGRSFIYALAAQGRAGVENLLDLYEKEMRVAMTLTGAKSIAELSRDSLV 376          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_STRMK (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain K279a) GN=lldD PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.398e-30
Identity = 78/230 (33.91%), Postives = 117/230 (50.87%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 674
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++   K P+++KG+L  +D              SNHG RQLD V +T  AL  +  A QG + +  D G+R G DV + LALGA  + +GR  VY+LAA+GE GV  +L+++ +E  +AM L+G R + +I RD +V+
Sbjct:  148 GVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRIGQAITHPHWAWDVGLFGRPHDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVRFGADGIVVSNHGGRQLDGVLSTARALPAIADAVQGDLKILADSGIRTGLDVVRMLALGADTVLLGRAFVYALAAQGEAGVANLLDLIAKEMRVAMTLTGARRIADIGRDSLVS 377          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_STRM5 (L-lactate dehydrogenase [cytochrome] OS=Stenotrophomonas maltophilia (strain R551-3) GN=lldD PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.132e-30
Identity = 78/229 (34.06%), Postives = 116/229 (50.66%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMD--EANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 671
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +     N +GL  Y+       D S+SWKD++W++   K P+++KG+L  +D              SNHG RQLD V +T  AL  +  A QG + +  D G+R G DV + LALGA  + +GR  VY+LAA+GE GV  +L+++ +E  +AM L+G R + +I RD +V
Sbjct:  148 GVTTLVFTVDMPVPGARYRDAHSGMSGPNASLRRIGQAITHPHWAWDVGLFGRPHDLGNISTYRGNPTGLEDYIGWLGSNFDPSISWKDLEWIREFWKGPMVIKGILDPDDARDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVQGDLKILADSGIRTGLDVVRMLALGADTVLLGRAFVYALAAQGEAGVANLLDLIAKEMRVAMTLTGARRIADIGRDSLV 376          
The following BLAST results are available for this feature:
BLAST of EY711058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_CITK84.831e-3132.91L-lactate dehydrogenase [cytochrome] OS=Citrobacte... [more]
LLDD_XANP21.076e-3032.77L-lactate dehydrogenase [cytochrome] OS=Xanthobact... [more]
LLDD_PSEAB1.076e-3033.33L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_ESCF31.076e-3032.49L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_SALCH1.836e-3032.49L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_AZOC51.836e-3034.93L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
LLDD_VIBCM2.398e-3031.88L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_VIBCH2.398e-3031.88L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]
LLDD_STRMK2.398e-3033.91L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]
LLDD_STRM53.132e-3034.06L-lactate dehydrogenase [cytochrome] OS=Stenotroph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-C08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711058 ID=EY711058; Name=EY711058; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGGTGGTTGCTTAGCTTGTGAGAAGGGCTGAAAGAGCCGGA
TTCAAGGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGA
AGCTGACATCAAAAACAGATTCACTCTACCACCATTTTTGACATTAAAGA
ATTTTCAGGGTTTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGG
CTTGCTGCCTATGTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGA
CGTGAAGTGGCTTCAAACAATCACCAAATTGCCAATTCTGGTGAAGGGTG
TACTCACAGCAGAGGATGCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGG
ATTATTGTATCCAATCATGGAGCTCGTCAACTTGACTATGTCCCTGCCAC
TATCATGGCCCTGGAAGAGGTTGTGAAAGCTACTCAGGGGCGTATTCCTG
TGTTCTTGGATGGTGGTGTTAGGCGAGGAACTGATGTCTTCAAAGCCTTG
GCACTTGGAGCCTCTGGTATATTTATTGGACGACCAGTGGTGTACTCATT
GGCAGCTGAGGGAGAGAAAGGCGTTAGAAGAGTACTCGAGATGCTGCGTG
AAGAATTTGAGCTAGCAATGGCACTAAGTGGTTGCCGCTCACTCAAAGAG
ATTACTCGTGATCACATCGTCACTGAATGGGATGCTTCTCTCCCTCGTCG
GGTCCCAGGGTATAGATACGTGCATGCAAATAGAAGAAAGAGCAAAAATT
TGGTACTTTCTATTACTTTCTTTTCTTGGAGACCTAGTCATGTTTAATTG
ATCTGAATATTTTTAGCCTCTGTTATGAGGATATTGCTACTTCTGCCCTT
CCCTGGTAAAAAAAAAAAAAGGCGGCCGCTCTAAA
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