EY711058

Overview
NameEY711058
Unique NameEY711058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_CHRSD (L-lactate dehydrogenase [cytochrome] OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=lldD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.190e-29
Identity = 79/230 (34.35%), Postives = 114/230 (49.57%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRF--------------TLPPFLTLKNFQGL--DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 674
            G K +  TVD P  G R  D  +                T P +       G   DLG + +     + L  Y+A      D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD VP+T  AL  +  A +G + +  D GVR G DV + +A+GA  I +GR  +Y+LA  GE GV  +LE+  +E  +AM L+G RS+ E+  D +VT
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGKHGGLRRMLQAVTHPSWAWDVGLHGRPHDLGNVSDYRGQPTELEDYIAWLGNNFDPSISWKDLEWIREFWDGPMIIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVPSTARALPAIADAVKGDLAILADSGVRNGLDVVRMIAMGADTILLGRAYIYALATAGEAGVAHLLELFEKEMRVAMTLTGARSIAELGSDSLVT 377          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_AGRVS (L-lactate dehydrogenase [cytochrome] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=lldD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.190e-29
Identity = 77/229 (33.62%), Postives = 117/229 (51.09%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQG-------LDLGKMDEANDSG-----------LAAYVAG---QIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 671
            G + +  TVD P  G R  D  +  + P     +  Q        +D+G + + +D G           LA YV       D S+ WKD++W++   K P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G + +  D G+R G DV + +A GA G+ IGR  VY+LAA G+ GV  +L++  +E  +AM L+G RS+ EI+ D +V
Sbjct:  148 GIRKLVFTVDMPVPGARYRDAHSGMSGPNASLRRIIQAVMHPTWAIDVGLLGKPHDLGNVSAYRQQKTNLADYVGWLGENFDPSIGWKDLEWIRDFWKGPMIIKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGVLSSARALPAIAAAVKGDLTILADSGIRSGLDVVRMIAQGADGVLIGRAFVYALAAAGQAGVENLLDLFAKEMRVAMTLTGARSIAEISPDSLV 376          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_SALPC (L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi C (strain RKS4594) GN=lldD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.554e-29
Identity = 76/237 (32.07%), Postives = 120/237 (50.63%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     + +Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L+++ +E ++AM L+G +++ EI+ D +V E   SLP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYWQAVMHPKWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIREFWDGPMVIKGLLDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLDLIEKEMKVAMTLTGAKTISEISGDSLVQELGKSLP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_ECOUT (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain UTI89 / UPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.030e-29
Identity = 76/237 (32.07%), Postives = 117/237 (49.37%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQVLGKELP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_ECOK1 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O1:K1 / APEC GN=lldD PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.030e-29
Identity = 76/237 (32.07%), Postives = 117/237 (49.37%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSACALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQVLGKELP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_ECO45 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.030e-29
Identity = 76/237 (32.07%), Postives = 117/237 (49.37%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYV---AGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+   A   D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLANNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQVLGKELP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_YERPY (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 75/228 (32.89%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 668
            G K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++ +E  +AM L+G + + +I RD +
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_YERPS (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis GN=lldD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 75/228 (32.89%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 668
            G K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++ +E  +AM L+G + + +I RD +
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_YERPP (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis (strain Pestoides F) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 75/228 (32.89%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 668
            G K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++ +E  +AM L+G + + +I RD +
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_YERPN (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 75/228 (32.89%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 668
            G K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++ +E  +AM L+G + + +I RD +
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
The following BLAST results are available for this feature:
BLAST of EY711058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_CHRSD1.190e-2934.35L-lactate dehydrogenase [cytochrome] OS=Chromohalo... [more]
LLDD_AGRVS1.190e-2933.62L-lactate dehydrogenase [cytochrome] OS=Agrobacter... [more]
LLDD_SALPC1.554e-2932.07L-lactate dehydrogenase [cytochrome] OS=Salmonella... [more]
LLDD_ECOUT2.030e-2932.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECOK12.030e-2932.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_ECO452.030e-2932.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_YERPY3.462e-2932.89L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPS3.462e-2932.89L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPP3.462e-2932.89L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPN3.462e-2932.89L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-C08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711058 ID=EY711058; Name=EY711058; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGGTGGTTGCTTAGCTTGTGAGAAGGGCTGAAAGAGCCGGA
TTCAAGGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGA
AGCTGACATCAAAAACAGATTCACTCTACCACCATTTTTGACATTAAAGA
ATTTTCAGGGTTTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGG
CTTGCTGCCTATGTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGA
CGTGAAGTGGCTTCAAACAATCACCAAATTGCCAATTCTGGTGAAGGGTG
TACTCACAGCAGAGGATGCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGG
ATTATTGTATCCAATCATGGAGCTCGTCAACTTGACTATGTCCCTGCCAC
TATCATGGCCCTGGAAGAGGTTGTGAAAGCTACTCAGGGGCGTATTCCTG
TGTTCTTGGATGGTGGTGTTAGGCGAGGAACTGATGTCTTCAAAGCCTTG
GCACTTGGAGCCTCTGGTATATTTATTGGACGACCAGTGGTGTACTCATT
GGCAGCTGAGGGAGAGAAAGGCGTTAGAAGAGTACTCGAGATGCTGCGTG
AAGAATTTGAGCTAGCAATGGCACTAAGTGGTTGCCGCTCACTCAAAGAG
ATTACTCGTGATCACATCGTCACTGAATGGGATGCTTCTCTCCCTCGTCG
GGTCCCAGGGTATAGATACGTGCATGCAAATAGAAGAAAGAGCAAAAATT
TGGTACTTTCTATTACTTTCTTTTCTTGGAGACCTAGTCATGTTTAATTG
ATCTGAATATTTTTAGCCTCTGTTATGAGGATATTGCTACTTCTGCCCTT
CCCTGGTAAAAAAAAAAAAAGGCGGCCGCTCTAAA
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