EY711058

Overview
NameEY711058
Unique NameEY711058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_YERPG (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Angola) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 75/228 (32.89%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 668
            G K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++ +E  +AM L+G + + +I RD +
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_YERPE (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis GN=lldD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 75/228 (32.89%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 668
            G K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++ +E  +AM L+G + + +I RD +
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_YERPB (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 75/228 (32.89%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 668
            G K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++ +E  +AM L+G + + +I RD +
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_YERPA (L-lactate dehydrogenase [cytochrome] OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 75/228 (32.89%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 668
            G K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++ +E  +AM L+G + + +I RD +
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_YERP3 (L-lactate dehydrogenase [cytochrome] OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=lldD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29
Identity = 75/228 (32.89%), Postives = 116/228 (50.88%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAY-------------VAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 668
            G K +  TVD P  G R  D  +  + P     +  Q +       D+G   + +D G ++AY             +A   D S+SWKD++W++   + P+++KG+L  ED              SNHG RQLD V +T  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  VY+LA  GE GV  +L ++ +E  +AM L+G + + +I RD +
Sbjct:  148 GVKTLVFTVDMPVPGARYRDAHSGMSGPNAAARRLLQAIAHPQWAWDVGLNGKPHDLGNISAYLGKPTTLEDYMGWIATNFDPSISWKDLEWVREFWQGPMIIKGILDPEDAKDAVKFGADGIVVSNHGGRQLDGVLSTARALPAIADAVKGDITILADSGIRTGLDVVRMIALGADSVLLGRAFVYALATAGEAGVINLLTLIEQEMRVAMTLTGAKRIADINRDSL 375          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_ECO81 (L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O81 (strain ED1a) GN=lldD PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.522e-29
Identity = 76/237 (32.07%), Postives = 116/237 (48.95%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  I +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTILLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_SHISS (L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain Ss046) GN=lldD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.906e-29
Identity = 75/237 (31.65%), Postives = 116/237 (48.95%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_SHIFL (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri GN=lldD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.906e-29
Identity = 75/237 (31.65%), Postives = 116/237 (48.95%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_SHIF8 (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri serotype 5b (strain 8401) GN=lldD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.906e-29
Identity = 75/237 (31.65%), Postives = 116/237 (48.95%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELP 384          
BLAST of EY711058 vs. ExPASy Swiss-Prot
Match: LLDD_SHIDS (L-lactate dehydrogenase [cytochrome] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=lldD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.906e-29
Identity = 75/237 (31.65%), Postives = 116/237 (48.95%), Query Frame = 3
Query:   48 GFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL----------------DLGKMDE--ANDSGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXXSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLP 695
            G   +  TVD P  G R  D  +  + P     +  Q +                DLG +       +GL  Y+       D S+SWKD++W++     P+++KG+L  ED              SNHG RQLD V ++  AL  +  A +G I +  D G+R G DV + +ALGA  + +GR  +Y+LA  G+ GV  +L ++ +E ++AM L+G +S+ EIT+D +V      LP
Sbjct:  148 GCSTLVFTVDMPTPGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLEDYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHGGRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLLNLIEKEMKVAMTLTGAKSINEITQDSLVQGLGKELP 384          
The following BLAST results are available for this feature:
BLAST of EY711058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_YERPG3.462e-2932.89L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPE3.462e-2932.89L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPB3.462e-2932.89L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERPA3.462e-2932.89L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_YERP33.462e-2932.89L-lactate dehydrogenase [cytochrome] OS=Yersinia p... [more]
LLDD_ECO814.522e-2932.07L-lactate dehydrogenase [cytochrome] OS=Escherichi... [more]
LLDD_SHISS5.906e-2931.65L-lactate dehydrogenase [cytochrome] OS=Shigella s... [more]
LLDD_SHIFL5.906e-2931.65L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIF85.906e-2931.65L-lactate dehydrogenase [cytochrome] OS=Shigella f... [more]
LLDD_SHIDS5.906e-2931.65L-lactate dehydrogenase [cytochrome] OS=Shigella d... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-003-C08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY711058 ID=EY711058; Name=EY711058; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGGTGGTTGCTTAGCTTGTGAGAAGGGCTGAAAGAGCCGGA
TTCAAGGCCATTGCTCTAACAGTTGATACCCCGAGGCTGGGTCGCAGAGA
AGCTGACATCAAAAACAGATTCACTCTACCACCATTTTTGACATTAAAGA
ATTTTCAGGGTTTGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGG
CTTGCTGCCTATGTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGA
CGTGAAGTGGCTTCAAACAATCACCAAATTGCCAATTCTGGTGAAGGGTG
TACTCACAGCAGAGGATGCGCGGATTGCAGTTCAAGCTGGAGCAGCTGGG
ATTATTGTATCCAATCATGGAGCTCGTCAACTTGACTATGTCCCTGCCAC
TATCATGGCCCTGGAAGAGGTTGTGAAAGCTACTCAGGGGCGTATTCCTG
TGTTCTTGGATGGTGGTGTTAGGCGAGGAACTGATGTCTTCAAAGCCTTG
GCACTTGGAGCCTCTGGTATATTTATTGGACGACCAGTGGTGTACTCATT
GGCAGCTGAGGGAGAGAAAGGCGTTAGAAGAGTACTCGAGATGCTGCGTG
AAGAATTTGAGCTAGCAATGGCACTAAGTGGTTGCCGCTCACTCAAAGAG
ATTACTCGTGATCACATCGTCACTGAATGGGATGCTTCTCTCCCTCGTCG
GGTCCCAGGGTATAGATACGTGCATGCAAATAGAAGAAAGAGCAAAAATT
TGGTACTTTCTATTACTTTCTTTTCTTGGAGACCTAGTCATGTTTAATTG
ATCTGAATATTTTTAGCCTCTGTTATGAGGATATTGCTACTTCTGCCCTT
CCCTGGTAAAAAAAAAAAAAGGCGGCCGCTCTAAA
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