EY710995

Overview
NameEY710995
Unique NameEY710995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_BARBK (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dxs PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.982e-72
Identity = 134/236 (56.78%), Postives = 173/236 (73.31%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQ++HDV +QKLPVRFA+DRAG VGADG TH G+FD+ F++ LP  VVMAPSDE ELMHMV TAAV D  P  FR+PRG GIG  LP   +G  LEIGKGR+L EG RVA++ +G+ + + ++AA+ L ++ IS TVADARF KPLD DL+R+LA EHE+ IT+EEG++GGFG+HV  FL    +L+  LK+R++ LPD Y++HGSP   L    L  + I   V + L
Sbjct:  395 TFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAVYDQGPISFRYPRGEGIGMDLP--QRGEVLEIGKGRVLREGSRVALVCFGTQLSEVLVAADELAAEGISTTVADARFAKPLDKDLMRRLAREHEVFITIEEGAIGGFGAHVLQFLAQEALLEHGLKVRTLRLPDEYLNHGSPEKILSRVGLDAKGIINAVFTSL 628          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS1_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs1 PE=3 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.589e-72
Identity = 135/238 (56.72%), Postives = 171/238 (71.85%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            SFLQRGYDQ+ HDV LQ LPVRF +DRAGLVGADG TH GAFDV F++ LPNM VMA +DEAEL+HM+ATA   D+ P  FRFPRG G+G  +P   +GT LE G+GR++ EG  VAIL +G+ + + + AA +L+++ +SVTVADARF +PLDT LI QL   H  L+TVE+G++GGFG+HV H+L  SG  DG L LR M LPDR+I+  SP D   ++ L    I+AT    L R
Sbjct:  398 SFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVGFITSLPNMTVMAAADEAELIHMIATAVAFDEGPIAFRFPRGEGVGVEMP--ERGTVLEPGRGRVVREGTDVAILSFGAHLHEALQAAKLLEAEGVSVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFDGGLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALAR 633          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_NITWN (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=dxs PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 4.416e-72
Identity = 134/239 (56.07%), Postives = 173/239 (72.38%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPL-KLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQRGYDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FD  F+ CLPNMV+MA +DEAEL+HMVAT   I+DRPS  R+PRG G G  +P    G PL IGKGRI+ +G ++A+L +G+ + +C  AA+ L +  +S T+ADARF KPLD DL  +LA EH++LIT+EEGS+GGFGSHV   L  +G LDG L ++RSM+LPD ++DH +P      + L  + I A V   L +
Sbjct:  420 TFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAFLGCLPNMVIMAAADEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLALKLAREHDVLITIEEGSIGGFGSHVMQTLMDNGALDGGLVRVRSMILPDEFLDHDTPTAMYARAGLDAKGIVAKVFEALGK 656          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_RHOPT (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=dxs PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.768e-72
Identity = 130/238 (54.62%), Postives = 175/238 (73.53%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQR YDQ+VHDV +QKLPVRFA+DRAGLVGADG TH G+FD  ++ CLPNMV+MA +DEAEL+HMVAT   IDDRPS  R+PRG G G  +P    G PLEIGKGR++ +G++VA+L +G+ + +   AA+ L +  +S TVADARF KPLD +L+ +LA +HE+L+T+EEGS+GGFGSHV   L   G+LDG +K+R++VLPD ++DH +P      + L  + I   V  +L +
Sbjct:  396 TFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSAVRYPRGEGRGVEMP--EVGIPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_RHOPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris GN=dxs PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.768e-72
Identity = 130/238 (54.62%), Postives = 175/238 (73.53%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQR YDQ+VHDV +QKLPVRFA+DRAGLVGADG TH G+FD  ++ CLPNMV+MA +DEAEL+HMVAT   IDDRPS  R+PRG G G  +P    G PLEIGKGR++ +G++VA+L +G+ + +   AA+ L +  +S TVADARF KPLD +L+ +LA +HE+L+T+EEGS+GGFGSHV   L   G+LDG +K+R++VLPD ++DH +P      + L  + I   V  +L +
Sbjct:  396 TFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNMVIMAAADEAELVHMVATQVAIDDRPSAVRYPRGEGRGVEMP--EVGIPLEIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SILPO (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter pomeroyi GN=dxs PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 7.533e-72
Identity = 137/236 (58.05%), Postives = 173/236 (73.31%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD+ +++ LP MVVMA +DEAEL+HMVATAA  DD P  FR+PRG G+G  +P    G  LEIGKGR++ +G RVA+L +G+ + +   AA  L ++ I+ T+ADARF KPLD DLI  LA++HE LIT+EEG+VGGFGSHV   L   G+ D  LK RSMVLPD +ID  SPAD    + ++   I A VL +L
Sbjct:  399 TFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGMVVMAAADEAELVHMVATAAAHDDGPIAFRYPRGEGVGVEMP--ELGKVLEIGKGRMIQKGARVALLSFGTRLTEVQKAAEALAARGITPTIADARFAKPLDRDLILNLAHDHEALITIEEGAVGGFGSHVAQLLADEGVFDHGLKFRSMVLPDIFIDQSSPADMYAVAGMNAPQIEAKVLDVL 632          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_BARQU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana GN=dxs PE=3 SV=1)

HSP 1 Score: 270.396 bits (690), Expect = 9.839e-72
Identity = 133/238 (55.88%), Postives = 173/238 (72.69%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQR YDQV+HDV +QKLPVRFA+DRAG VGADG TH G+FD+ F++ LP  VVMAPSDE ELMHMV TAA  D  P  FR+PRG G+G  LP   +G  LEIGKGR+L EG RVA++ +G+ + + ++AA+ L ++ +S TVADARF KPLD DL+R+LA EHE+L+ VEEG++GGFG+H+  FL   G+L+  LK+R++  PD Y++HGSP   L    L    I  TV + L R
Sbjct:  395 TFLQRAYDQVIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVFLATLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGVGMDLP--QRGELLEIGKGRVLREGSRVALVCFGTRMSEVLVAADALIAEGLSTTVADARFAKPLDKDLMRRLACEHEVLVAVEEGAIGGFGAHLLQFLAKEGLLEHGLKVRTLKFPDEYLNHGSPEKVLSRIGLDAVGIVNTVFTALGR 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_AGRT5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.285e-71
Identity = 131/236 (55.51%), Postives = 172/236 (72.88%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQ+VHDV +Q LPVRF +DRAG VGADGPTH G+FD TF++ LP MVVMA +DEAEL HMV TAA  D+ P  FR+PRG G+G  +P   +G  L+IGKGRI+ EG +VA+L +G+ + +C+ AA  L +  +S TVADARF KPLD DLIRQLA  HE+L+T+EEGSVGGFG+HV HF+  +G+LD   K+R++ LPD++++   P      + L    I +TV + L
Sbjct:  395 TFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILQIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNAL 628          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SILST (1-deoxy-D-xylulose-5-phosphate synthase OS=Silicibacter sp. (strain TM1040) GN=dxs PE=3 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.678e-71
Identity = 138/236 (58.47%), Postives = 170/236 (72.03%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD+ FM+ LP MVVMA +DEAEL HMVATAA  D  P  FR+PRG G G  +P   +   LEIGKGRI+ EG RVA+L +G+ + +   AA  L ++ I+ TVADARF KPLD D+I  LA +HE LIT+EEG+VGGFGSHV   L+   + D  LK RSMVLPD +ID  SP D  + + ++  HI A VL +L
Sbjct:  399 TFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAFMANLPGMVVMAAADEAELKHMVATAAAYDAGPIAFRYPRGEGEGVEMPEQPE--VLEIGKGRIIEEGSRVALLSFGTRLGEVRKAAEALAARGITPTVADARFAKPLDRDMILSLAEKHEALITIEEGAVGGFGSHVAQLLSEEAVFDTGLKFRSMVLPDTFIDQASPKDMYDSAAMNAEHIEAKVLDVL 632          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_AGRVS (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=dxs PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.377e-71
Identity = 135/238 (56.72%), Postives = 170/238 (71.43%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQRGYDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD  F++ LP  VVMA +DEAEL HMV TAA  D+ P  FR+PRG G+G  +P   +G  L IGKGRI+ EG +VA+L +G+ + +C++AA  L +  +  TVADARF KPLD DLIRQLA  H +LITVEEG+VGGFGS V H L   G+LD  LK+RS+VLPD ++D   P    E++ L  + I +TV + L R
Sbjct:  395 TFLQRGYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTGFLASLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVQMP--ERGEILPIGKGRIIKEGSKVALLSFGTRLAECLVAAEDLDAAGLPTTVADARFAKPLDLDLIRQLARHHAVLITVEEGAVGGFGSQVLHMLANEGLLDHGLKVRSLVLPDLWMDQAKPDVMYEKAGLDAKGIVSTVFTALSR 630          
The following BLAST results are available for this feature:
BLAST of EY710995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_BARBK1.982e-7256.781-deoxy-D-xylulose-5-phosphate synthase OS=Bartone... [more]
DXS1_RHOS42.589e-7256.721-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodo... [more]
DXS_NITWN4.416e-7256.071-deoxy-D-xylulose-5-phosphate synthase OS=Nitroba... [more]
DXS_RHOPT5.768e-7254.621-deoxy-D-xylulose-5-phosphate synthase OS=Rhodops... [more]
DXS_RHOPA5.768e-7254.621-deoxy-D-xylulose-5-phosphate synthase OS=Rhodops... [more]
DXS_SILPO7.533e-7258.051-deoxy-D-xylulose-5-phosphate synthase OS=Silicib... [more]
DXS_BARQU9.839e-7255.881-deoxy-D-xylulose-5-phosphate synthase OS=Bartone... [more]
DXS_AGRT51.285e-7155.511-deoxy-D-xylulose-5-phosphate synthase OS=Agrobac... [more]
DXS_SILST1.678e-7158.471-deoxy-D-xylulose-5-phosphate synthase OS=Silicib... [more]
DXS_AGRVS6.377e-7156.721-deoxy-D-xylulose-5-phosphate synthase OS=Agrobac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-E05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710995 ID=EY710995; Name=EY710995; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGATCATTTCTGCAAAGAGGATATGATCAGGTTGTACATGA
TGTAGACCTTCAAAAATTACCAGTCCGCTTTGCAATGGATCGAGCTGGTT
TGGTTGGTGCGGATGGACCTACTCACTGTGGAGCATTTGACGTCACATTC
ATGTCTTGCTTGCCCAACATGGTGGTCATGGCTCCATCTGATGAAGCTGA
GCTAATGCACATGGTCGCTACCGCAGCAGTTATAGATGACAGGCCCAGCT
GTTTCAGATTTCCAAGGGGCAACGGAATTGGAGCAGTTCTCCCGCCTAAT
AACAAAGGAACTCCACTTGAGATTGGGAAAGGAAGAATCCTAATGGAAGG
CGATAGAGTGGCAATTTTGGGCTATGGTTCTATAGTCCAACAATGTGTGC
TAGCTGCGAACATGCTTAAGAGCCAAGACATTTCCGTGACAGTGGCTGAT
GCAAGATTTTGCAAACCTTTGGATACAGACCTCATTAGACAGTTGGCCAA
TGAGCATGAAATCCTAATTACTGTGGAAGAGGGTTCTGTGGGAGGCTTTG
GCTCTCATGTATGTCACTTTCTAACCTTAAGTGGCATTCTGGATGGACCT
CTCAAGTTGAGATCAATGGTGCTTCCTGATAGATACATCGACCATGGATC
ACCAGCCGATCAGCTTGAAGAATCANGGCTCTCCCTCAGGCATATCTCTG
CAACAGTCTTATCTCTCTTANGGAGGCCAAAAGAAGCCCTTCTGATTTAA
GTATCATACAAATCAAACAGCATCTTGCCCTTTGGATCCACTTTACATCC
NAGNNNTGGGGTGTATACACTANCAGGTCCCACTCTAGATCTTTACCTCA
TATCCCCNTGTACATGAGCATTACGTGGGATATAAAAGTATGGT
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