EY710995

Overview
NameEY710995
Unique NameEY710995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS2_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs2 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.377e-71
Identity = 134/236 (56.78%), Postives = 171/236 (72.46%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH G+FDV F+S LP +VVMA +DEAEL+HMVATAA  D+ P  FR+PRG+G+G  +P   KG PL+IG+GR++ EG R+A+L +G+ + +  +AA  L ++ IS TVADARF KPLD DLI QLA  HE LIT+EEG++GGFGSHV   L  +G+ D   + RSMVLPD +IDH S       + L+   I    L  L
Sbjct:  395 TFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLSNLPGIVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGDGVGVEMPV--KGVPLQIGRGRVVSEGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEALITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAADIERKALETL 628          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_RHIL3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dxs PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.088e-70
Identity = 135/238 (56.72%), Postives = 167/238 (70.17%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQR YDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD  F++ LP  VVMA +DEAEL HMV TA   D  P  FR+PRG G+G  +P   +G  L+IGKGRI+ EG +VA+L +G+ +  C+LAA  L +  +S TVADARF KPLD DLIRQLA  HE++ITVEEGS+GGFGSHV HFL   G+LD  LKLRS+V+PD +++   P      + L    I +TV   L R
Sbjct:  395 TFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDGGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDNGLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_CAUSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter sp. (strain K31) GN=dxs PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 3.165e-70
Identity = 134/236 (56.78%), Postives = 169/236 (71.61%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQVVHDV +Q+LPVRFAMDRAGLVGADGPTH G FD+ FM  LP MV+MA +DE EL HMV+TA  IDDRPS FR+PRG G+G  +P  +   PLEIGKGRI+ EG  VAI+  G+ + +C+ AA++L ++ +S TVADARF KPLD D++ +LA EHE +ITVEEG++GGFG+ V   L   G LD  LK+R++VLPD + D   P     ++ L    I    LS L
Sbjct:  393 TFLQRGYDQVVHDVAIQRLPVRFAMDRAGLVGADGPTHAGTFDLGFMGALPGMVLMAAADEVELAHMVSTAVAIDDRPSAFRYPRGEGLGLTIP--DLAAPLEIGKGRIVREGTSVAIVSLGTRLAECLKAADLLAARGLSATVADARFAKPLDVDMLLRLAREHEAIITVEEGAMGGFGAFVLQALATHGALDRGLKIRTLVLPDVFQDQDKPDLMYAQAGLDAEGILRGALSAL 626          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_NITHX (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=dxs PE=3 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.134e-70
Identity = 132/239 (55.23%), Postives = 170/239 (71.13%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD  ++ CLPN V+MA SDEAEL+HMVAT   I+DRPS  R+PRG G G  +P    G PL IGKGRI+ +G +VA+L  G+ + +C  AA+ L +  +S T+ADARF KPLD DL+ +LA +H++LIT+EEGS+GGFGSHV   L   G LD G +++R+MVLPD ++DH +P        L  R I A V   L +
Sbjct:  422 TFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYLGCLPNFVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKGRIVRQGSKVALLSLGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLVLKLARDHDVLITIEEGSIGGFGSHVMQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDRGIVAKVFEALGK 658          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_PHEZH (1-deoxy-D-xylulose-5-phosphate synthase OS=Phenylobacterium zucineum (strain HLK1) GN=dxs PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 7.051e-70
Identity = 136/236 (57.63%), Postives = 166/236 (70.34%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQVVHDV +Q LPVRFA+DRAGLVGADGPTH G+FDV FM  LP MVVM P+DEAEL   +ATA  IDDRPS FR+PRG G+G  +P      PLEIG+GRI+ EG  VAIL +G+ + + + AA+ML ++ +S TVADARF KPLD DL+ +LA EHE LITVEEG+VGGFG  V H L   G LD  LK+R++ LPD + D   P     ++ L    I    L+ L
Sbjct:  393 TFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGPTHAGSFDVGFMGQLPGMVVMGPADEAELARAIATAVAIDDRPSAFRYPRGEGVGVEIPA--LADPLEIGRGRIVREGTAVAILSFGTRLGESLKAADMLAARGLSATVADARFAKPLDVDLLLRLAREHEALITVEEGAVGGFGGFVLHALAEHGALDRGLKIRTLTLPDIFQDQDKPEAMYAQAGLDAEGIVRAALAAL 626          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_RHIME (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium meliloti GN=dxs PE=3 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 9.209e-70
Identity = 132/236 (55.93%), Postives = 167/236 (70.76%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD T+++ LP  VVMA +DEAEL HMV TAA  D+ P  FR+PRG G+G  LP   +G  L IGKGRI+ +G++VA+L +G+ +  C+LAA  L +  +S TVADARF KPLD DLIRQLA  HE+LIT+EEG+VGGF SHV  FL   G++DG LK+R MV+PD +++   P      + L    I +TV   L
Sbjct:  400 TFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYLATLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVELP--ERGEILAIGKGRIVKQGNKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEVLITIEEGAVGGFASHVLQFLAEEGLIDGGLKVRPMVMPDIWMEQAKPEAMYARAGLDRAGIVSTVFKAL 633          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_AZOC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.203e-69
Identity = 136/236 (57.63%), Postives = 163/236 (69.07%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQVVHDV LQ LPVRFA+DRAGLVGADG TH GAFD+  ++CLP   VMAP+DEAEL HM+ATA   D  P  FRFPRG G+G   P   KG  L IGKGR++ EG  +A L  G+ +  C+  A  L S  IS TVADARF KP+D +LI  LA  H  L+ VEEGSVGGFGS V  FL+  G++DG LK+R++ LPD YIDH +PA QL E+ L    I    L+L+
Sbjct:  394 TFLQRGYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDLAMLTCLPGFTVMAPADEAELTHMIATAVGHDAGPIAFRFPRGEGVGVERP--EKGERLPIGKGRVVREGQDIAFLSLGTRLAACLDVAERLSSLGISATVADARFAKPIDRELIAHLARTHAALVVVEEGSVGGFGSQVLQFLSDEGLMDGGLKVRALTLPDTYIDHDTPAAQLAEAGLDADGIYKRALALV 627          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_NOVAD (1-deoxy-D-xylulose-5-phosphate synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dxs PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.969e-69
Identity = 130/236 (55.08%), Postives = 172/236 (72.88%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR +DQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FDVT+++ LPN+VVMA +DEAEL+HM  TAA+ D  P  FR+PRGNG+G  LP       LEIGKGRI+ +G +VA+L  G+ + + + AA+ L ++ +S TVAD RF KPLD  LIRQL   H++++TVEEGS+GG G+HV    +  G++DG LK+R+M LPD + DH +P  Q +E+ L+  HI  TVL  L
Sbjct:  395 TFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYLATLPNLVVMAAADEAELVHMTYTAALHDSGPIAFRYPRGNGVGVPLP--EVPERLEIGKGRIIRQGSKVALLSLGTRLAEALKAADQLDARGLSTTVADLRFAKPLDVALIRQLMTTHDVIVTVEEGSIGGLGAHVLTMASDEGLVDGGLKIRTMRLPDLFQDHDAPEKQYDEAGLNAPHIVDTVLKAL 628          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_RHIE6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CIAT 652) GN=dxs PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 1.018e-68
Identity = 133/238 (55.88%), Postives = 167/238 (70.17%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQR YDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD  F++ LP  VVMA +DEAEL HMV TA   D  P  FR+PRG G+G  +P   +G  L+IGKGRI+ EG +VA+L +G+ +  C+LAA  L++  +S TVADARF KPLD DLIRQLA  HE+LITVEEGSVGGFGS V  +L+  G+LD  LK+RS+V+PD +++   P      + L    I +TV   L R
Sbjct:  395 TFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLEAAGLSTTVADARFAKPLDHDLIRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_PELUB (1-deoxy-D-xylulose-5-phosphate synthase OS=Pelagibacter ubique GN=dxs PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.330e-68
Identity = 128/236 (54.24%), Postives = 171/236 (72.46%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQVVHDV +Q LPVRF +DRAGLVGADG TH G+FD+T++S LPN +VMAPSDEAEL+ M  T+  I+++P   R+PRGNGIG  LP  ++   +EIGKGR++ EG +V IL  G+ +++C +AA  LK++ I  T+ DARF KPLD +LI + A EHE +ITVEEGS+GGFGSHV + L+  GI D  LK R+M+LPD +I+  SP    + + L+   IS  +L +L
Sbjct:  393 TFLQRAYDQVVHDVAIQSLPVRFIIDRAGLVGADGSTHAGSFDITYLSTLPNFIVMAPSDEAELVKMTNTSMTINNKPCAIRYPRGNGIGVELPSIDEN--IEIGKGRVIQEGKQVCILSIGTRLEECKIAAAELKNKGIESTIVDARFAKPLDQELILKCAREHEAMITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTMILPDIFIEQDSPKKMYDVAGLNASQISKKILDIL 626          
The following BLAST results are available for this feature:
BLAST of EY710995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS2_RHOS46.377e-7156.781-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodo... [more]
DXS_RHIL31.088e-7056.721-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobi... [more]
DXS_CAUSK3.165e-7056.781-deoxy-D-xylulose-5-phosphate synthase OS=Cauloba... [more]
DXS_NITHX4.134e-7055.231-deoxy-D-xylulose-5-phosphate synthase OS=Nitroba... [more]
DXS_PHEZH7.051e-7057.631-deoxy-D-xylulose-5-phosphate synthase OS=Phenylo... [more]
DXS_RHIME9.209e-7055.931-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobi... [more]
DXS_AZOC51.203e-6957.631-deoxy-D-xylulose-5-phosphate synthase OS=Azorhiz... [more]
DXS_NOVAD5.969e-6955.081-deoxy-D-xylulose-5-phosphate synthase OS=Novosph... [more]
DXS_RHIE61.018e-6855.881-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobi... [more]
DXS_PELUB1.330e-6854.241-deoxy-D-xylulose-5-phosphate synthase OS=Pelagib... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-E05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710995 ID=EY710995; Name=EY710995; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGATCATTTCTGCAAAGAGGATATGATCAGGTTGTACATGA
TGTAGACCTTCAAAAATTACCAGTCCGCTTTGCAATGGATCGAGCTGGTT
TGGTTGGTGCGGATGGACCTACTCACTGTGGAGCATTTGACGTCACATTC
ATGTCTTGCTTGCCCAACATGGTGGTCATGGCTCCATCTGATGAAGCTGA
GCTAATGCACATGGTCGCTACCGCAGCAGTTATAGATGACAGGCCCAGCT
GTTTCAGATTTCCAAGGGGCAACGGAATTGGAGCAGTTCTCCCGCCTAAT
AACAAAGGAACTCCACTTGAGATTGGGAAAGGAAGAATCCTAATGGAAGG
CGATAGAGTGGCAATTTTGGGCTATGGTTCTATAGTCCAACAATGTGTGC
TAGCTGCGAACATGCTTAAGAGCCAAGACATTTCCGTGACAGTGGCTGAT
GCAAGATTTTGCAAACCTTTGGATACAGACCTCATTAGACAGTTGGCCAA
TGAGCATGAAATCCTAATTACTGTGGAAGAGGGTTCTGTGGGAGGCTTTG
GCTCTCATGTATGTCACTTTCTAACCTTAAGTGGCATTCTGGATGGACCT
CTCAAGTTGAGATCAATGGTGCTTCCTGATAGATACATCGACCATGGATC
ACCAGCCGATCAGCTTGAAGAATCANGGCTCTCCCTCAGGCATATCTCTG
CAACAGTCTTATCTCTCTTANGGAGGCCAAAAGAAGCCCTTCTGATTTAA
GTATCATACAAATCAAACAGCATCTTGCCCTTTGGATCCACTTTACATCC
NAGNNNTGGGGTGTATACACTANCAGGTCCCACTCTAGATCTTTACCTCA
TATCCCCNTGTACATGAGCATTACGTGGGATATAAAAGTATGGT
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