EY710995

Overview
NameEY710995
Unique NameEY710995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_CORGL (1-deoxy-D-xylulose-5-phosphate synthase OS=Corynebacterium glutamicum GN=dxs PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.392e-25
Identity = 80/248 (32.26%), Postives = 127/248 (51.21%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLP-PNNKGTPLEIGKGRILME----------GDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FL R +DQ++ DV +   PV   +DR+G+ G+DG +H G +D+   S +P + V AP DE  L  ++  A  IDD P+  RFP+G+     LP P      LE G   +  E             V I+  G      +  A+ +K   ++VTV D R+  P+   L+  L+++H+++IT+E+G + GG GS +   L  S + D P   R + +P +Y+DH S  + L +  L    I  TV+  L
Sbjct:  392 TFLNRAFDQLLMDVGMLNQPVTLVLDRSGVTGSDGASHNGVWDMALTSIVPGVQVAAPRDEDSLRELLNEAISIDDGPTVVRFPKGD-----LPTPIVAIDTLEDGVDVLAYEDATDVESTDDAPSVLIIAVGERATVALDVASRIKQHGVNVTVVDPRWIVPIPQSLV-ALSDDHDLVITIEDGVIHGGVGSLLSDALNASEV-DTP--RRQIAVPQKYLDHASRNEVLADYGLDADGIETTVVGWL 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_MYXXD (1-deoxy-D-xylulose-5-phosphate synthase OS=Myxococcus xanthus (strain DK 1622) GN=dxs PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.375e-25
Identity = 81/241 (33.61%), Postives = 119/241 (49.38%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKG-----TPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQ++HDV L  LPV FA+DRAGLVGADG TH G +DV  +  LP++ + +P    +L  M+ T A+     S  RFPRG      LPP  +G      PL   +  +  E  R+ ++  G +     +AA      +   +V DAR   PLD   + +      +++  E  + GG GS V       G++    ++R M +PD ++ HG    Q  E  L    +    L+LL
Sbjct:  351 TFLQRAYDQIIHDVCLPGLPVVFAVDRAGLVGADGATHQGTYDVASLRPLPDLHLWSPMVGEDLAPMLDT-ALAAPHASVIRFPRG-----TLPPLPEGLGAGEAPLRGARWLLRAEQPRLTLVTLGPL----GIAALEAARGEPGWSVLDARCASPLDEAALLEAGRSGHVVVAEEGTTRGGLGSAVLELFAAHGLM---ARVRLMGMPDAFVPHGDARVQRAEQGLDAEGLRRAGLALL 578          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_LEIXX (1-deoxy-D-xylulose-5-phosphate synthase OS=Leifsonia xyli subsp. xyli GN=dxs PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.909e-25
Identity = 73/237 (30.80%), Postives = 125/237 (52.74%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLS 714
            +F+ R +DQV+ DV L K  V F +DRAG+ G DGP+H G +D+  +  +P + + AP D       +A A  + D P+  RFP+G+     +P + +          +L E D+  V ++  G +    +  A  L +Q I  TV D R+  P+   ++  LA  H I++T+E+G  VGG G+ V   L  +GI      +  + LPD +IDH +  + L+++ L+ + I+  +++
Sbjct:  393 TFMNRAFDQVLMDVALHKAGVTFVLDRAGVTGPDGPSHHGIWDLAILQVVPGIRLAAPRDATRFREELAEAVAVADAPTVLRFPKGS-----VPADIEAVRRRDDGVDVLHESDQKDVLLVTVGPMAGLGLRVAEALAAQGIGATVVDPRWVVPVPRSVL-DLAAGHRIVVTMEDGIRVGGIGTRVRQDLREAGI---DTAVDELGLPDEFIDHATRDEILDDAGLTPQKIARDLVA 620          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_RHOE4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=dxs PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.023e-25
Identity = 71/233 (30.47%), Postives = 122/233 (52.36%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATV 708
            +FL R +DQ++ DV L K PV   +DRAG+ G DG +H G +D++ +  +P + V AP D   L   +  A ++DD P+  RFP+G    A+         +++ K      GD V ++  G      +  A  L  Q ISV V D R+  P+   L++ +A+++ +++T+E+G + GG GS V   +  +G+       R M +P +++DH S     +E  L+ + +S  +
Sbjct:  391 TFLNRAFDQLLMDVALLKQPVTVVLDRAGVTGVDGASHNGVWDLSLLGIIPGIRVAAPRDADTLREELDEALLVDDGPTVVRFPKGAVPEAIPAVKRLDGMVDVLKASEGERGD-VLLVAVGPFASLALEIAERLDKQGISVAVVDPRWVLPVADSLVK-MADKYALVVTIEDGGLHGGIGSTVSAAMRAAGV---HTSCRDMGVPQQFLDHASREAIHKELGLTAQDLSRKI 618          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS1_STRCO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Streptomyces coelicolor GN=dxs1 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.178e-24
Identity = 73/239 (30.54%), Postives = 126/239 (52.72%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FL R +DQ++ DV L +  V F +DRAG+ G DG +H G +D++ +  +P + + AP D  +L   +  A  +DD P+  RFP+   +G  +P  ++     IG   +L   DR  V ++  G +   C+ AA +L+++ I  TV D R+ KP+D  L   LA  H ++  VE+ S   G GS V   L   G  +  + +R   +P++++ H   A+ L +  L+   ++  + + L
Sbjct:  391 TFLNRAFDQLLMDVALHRCGVTFVLDRAGVTGVDGASHNGMWDMSVLQVVPGLRIAAPRDADQLRTQLREAVAVDDAPTLLRFPK-ESVGPAVPAVDR-----IGGLDVLHTADRSEVLLVAVGVMAPVCLGAAELLEARGIGCTVVDPRWVKPVDPAL-APLAARHRLVAVVEDNSRAAGVGSAVALAL---GDAEVDVPVRRFGIPEQFLAHAKRAEVLADIGLTPVDVAGRIAASL 619          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_CHLFF (1-deoxy-D-xylulose-5-phosphate synthase OS=Chlamydophila felis (strain Fe/C-56) GN=dxs PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.539e-24
Identity = 73/235 (31.06%), Postives = 112/235 (47.66%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLS 714
            +FL R  D V HDV LQ LPV  A+DRAGL   DG +H G +D++F+  +PNM++  P   A ++  +  +++  + PS  R+P    I       +     + G G IL +G+ + I+G G +    +     L +  IS TV D  F KP D +L   L   H  +I +EE S+ GG  S    FL   G     + +    +PD +  HG     L+   L    +   +L+
Sbjct:  397 TFLHRALDNVFHDVCLQGLPVILAIDRAGLAYGDGCSHHGIYDISFLRAMPNMIICQPR-SAIVLQQLLQSSLQWNMPSAIRYPNIAAIQRDPIATDVNMHRDPGLGEILSQGEDILIIGLGHMCNTALSIKLQLLTHGISATVVDPVFIKPFDNNLFSILLMHHSKVIIIEEHSIRGGLASEFNDFLATYGF---KVDVLHFGIPDAFFSHGDKESLLKRVGLDTESMVKRILT 627          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_ARTS2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Arthrobacter sp. (strain FB24) GN=dxs PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.539e-24
Identity = 76/238 (31.93%), Postives = 124/238 (52.10%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGA---VLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLS 714
            +FL R +DQ++ DV L K  V   +DRAG+ G DG +H G +D+  +  +P + + AP D   L   +  A  I+D P+  R+ +GN +GA    L   + G  +   +     E D V I+  G++ +  +  +N L +Q IS TV D R+  P+   +I  LA  H ++I +E+G   GG GS +   +  +G+      L  + LP  ++DHG+ A  LE   L+ R I+  V++
Sbjct:  399 TFLNRAFDQLLMDVALHKAGVTIVLDRAGVTGPDGASHHGMWDMAMVQIVPGLHLAAPRDATRLREELREAVAIEDAPTVVRYSKGN-VGAEVEALERLSDGVDVLARRPAGSSEND-VLIVSVGAMSELALDVSNRLGAQGISSTVVDPRWLLPVRKSII-ALAARHRLVICIEDGVRAGGVGSRIRQEMRAAGV---DTALNEVGLPVEFLDHGTRAQVLERVGLTARQITHDVVA 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SACEN (1-deoxy-D-xylulose-5-phosphate synthase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=dxs PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.010e-24
Identity = 71/233 (30.47%), Postives = 120/233 (51.50%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEE-GSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATV 708
            +FL R +DQ++ DV L + PV   +DR+G+ G DG +H G +D++ +  +P + V AP D   L   +  A  +DD P+  RFP+G+ I  V P   +   +++       E   V +   G+  Q  V  A  L +Q I VTV D R+  P+    +  LA  H +++T+E+ G  GGFG  +   +    I    + LR + +P+R++ H S  + L +  L+ + I+  +
Sbjct:  391 TFLNRAFDQLLMDVALHRQPVTVTLDRSGITGDDGASHNGMWDLSILGAIPGIQVAAPRDAVTLREELREAVAVDDGPTVMRFPKGSVIEEV-PAVERIGGVDVLSKPASDERSEVLLAAVGAFGQLGVAVAERLAAQGIGVTVVDPRWVVPV-PQAVLDLAARHSLVVTLEDCGRHGGFGWSLAAAMRDQEI---DVPLRDLAVPNRFLQHASRDEVLSDLGLTEQDIARRI 618          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS1_STRAW (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Streptomyces avermitilis GN=dxs1 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.010e-24
Identity = 72/242 (29.75%), Postives = 128/242 (52.89%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXRPKE 735
            +FL R +DQ++ DV L +  V F +DRAG+ G DG +H G +D++ +  +P + + AP D  +L   +  A  +DD P+  RFP+   +G  +P  +    +++       E  +V ++  G +   C+ AA +L+++ I  TV D R+ KP+D  L   LA EH ++  VE+ S   G G+ V   L LS   +  + +R   +P++++ H   A+ L +  L+   I+  + + L   +E
Sbjct:  391 TFLNRAFDQLLMDVALHRCGVTFVLDRAGVTGVDGASHNGMWDMSILQVVPGLRIAAPRDADQLRAQLREAVAVDDAPTLLRFPK-ESVGPAIPAVDHVGGMDV--LHRFPESPQVLLVAVGVMAPVCLQAAELLEARGIGCTVVDPRWVKPVDPSL-PGLAAEHRLVAVVEDNSRAAGVGAAVA--LALSD-AEVDVPVRRFGIPEQFLAHAKRAEVLADIGLTPVEIAGRISAGLATKEE 625          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_STRC1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Streptomyces sp. (strain CL190) GN=dxs PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.625e-24
Identity = 70/235 (29.79%), Postives = 124/235 (52.77%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR--VAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATV 708
            +FL R +DQ++ DV L +  V F +DRAG+ G DG +H G +D++ +  +P + + AP D   +   +  A  +DD P+  RFP+   +G  +P  ++     +G   +L   +R  V ++  G + Q C+  A +L+++ I  TV D R+ KP+D  ++  LA EH ++  VE+ S   G GS V   L   G  D  + +R   +P++++ H    + L +  L+   I+  +
Sbjct:  391 TFLNRAFDQLLMDVALHRCGVTFVLDRAGVTGVDGASHNGMWDMSVLQVVPGLRIAAPRDADHVRAQLREAVAVDDAPTLIRFPK-ESVGPRIPALDR-----VGGLDVLHRDERPEVLLVAVGVMAQVCLQTAELLRARGIGCTVVDPRWVKPVD-PVLPPLAAEHRLVAVVEDNSRAAGVGSAVALAL---GDADVDVPVRRFGIPEQFLAHARRGEVLADIGLTPVEIAGRI 615          
The following BLAST results are available for this feature:
BLAST of EY710995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_CORGL1.392e-2532.261-deoxy-D-xylulose-5-phosphate synthase OS=Coryneb... [more]
DXS_MYXXD2.375e-2533.611-deoxy-D-xylulose-5-phosphate synthase OS=Myxococ... [more]
DXS_LEIXX6.909e-2530.801-deoxy-D-xylulose-5-phosphate synthase OS=Leifson... [more]
DXS_RHOE49.023e-2530.471-deoxy-D-xylulose-5-phosphate synthase OS=Rhodoco... [more]
DXS1_STRCO1.178e-2430.541-deoxy-D-xylulose-5-phosphate synthase 1 OS=Strep... [more]
DXS_CHLFF1.539e-2431.061-deoxy-D-xylulose-5-phosphate synthase OS=Chlamyd... [more]
DXS_ARTS21.539e-2431.931-deoxy-D-xylulose-5-phosphate synthase OS=Arthrob... [more]
DXS_SACEN2.010e-2430.471-deoxy-D-xylulose-5-phosphate synthase OS=Sacchar... [more]
DXS1_STRAW2.010e-2429.751-deoxy-D-xylulose-5-phosphate synthase 1 OS=Strep... [more]
DXS_STRC12.625e-2429.791-deoxy-D-xylulose-5-phosphate synthase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-E05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710995 ID=EY710995; Name=EY710995; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGATCATTTCTGCAAAGAGGATATGATCAGGTTGTACATGA
TGTAGACCTTCAAAAATTACCAGTCCGCTTTGCAATGGATCGAGCTGGTT
TGGTTGGTGCGGATGGACCTACTCACTGTGGAGCATTTGACGTCACATTC
ATGTCTTGCTTGCCCAACATGGTGGTCATGGCTCCATCTGATGAAGCTGA
GCTAATGCACATGGTCGCTACCGCAGCAGTTATAGATGACAGGCCCAGCT
GTTTCAGATTTCCAAGGGGCAACGGAATTGGAGCAGTTCTCCCGCCTAAT
AACAAAGGAACTCCACTTGAGATTGGGAAAGGAAGAATCCTAATGGAAGG
CGATAGAGTGGCAATTTTGGGCTATGGTTCTATAGTCCAACAATGTGTGC
TAGCTGCGAACATGCTTAAGAGCCAAGACATTTCCGTGACAGTGGCTGAT
GCAAGATTTTGCAAACCTTTGGATACAGACCTCATTAGACAGTTGGCCAA
TGAGCATGAAATCCTAATTACTGTGGAAGAGGGTTCTGTGGGAGGCTTTG
GCTCTCATGTATGTCACTTTCTAACCTTAAGTGGCATTCTGGATGGACCT
CTCAAGTTGAGATCAATGGTGCTTCCTGATAGATACATCGACCATGGATC
ACCAGCCGATCAGCTTGAAGAATCANGGCTCTCCCTCAGGCATATCTCTG
CAACAGTCTTATCTCTCTTANGGAGGCCAAAAGAAGCCCTTCTGATTTAA
GTATCATACAAATCAAACAGCATCTTGCCCTTTGGATCCACTTTACATCC
NAGNNNTGGGGTGTATACACTANCAGGTCCCACTCTAGATCTTTACCTCA
TATCCCCNTGTACATGAGCATTACGTGGGATATAAAAGTATGGT
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