EY710995

Overview
NameEY710995
Unique NameEY710995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.737e-68
Identity = 134/236 (56.78%), Postives = 165/236 (69.92%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD+ +++ LP  VVMA +DEAEL HMVATA   DD P  FRFPRG G G  +P    G  LEIGKGRI+ EG RVAIL +G+ + +   A   L ++ I+ T+ADARF KPLD ++I  L   HE LITVEEG++GGFGSHV   L+  G+ D   K RSMVLPD +ID  SPAD    + ++   I   VLS+L
Sbjct:  399 TFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGFVVMAAADEAELKHMVATAVAHDDGPIAFRFPRGEGNGVDMP--EVGEVLEIGKGRIITEGTRVAILSFGTRLAEVQKAGEALAARGITPTIADARFAKPLDREMILDLVANHEALITVEEGAIGGFGSHVAQLLSDEGVFDTGFKYRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVL 632          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS1_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs1 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.962e-68
Identity = 129/236 (54.66%), Postives = 168/236 (71.19%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            SFLQRGYDQVVHDV LQKLPVRFA+DRAG VGADG TH G FD+ F+ CLPN+VVM  +DEAEL  MV TAA  D  P   R+PRG G+G  +P + +  PL IGKGRI+ EG  VA+L  G+ +Q C+ A  +L ++ ++ TVADARF KP D +L+  LA  HE+LI VEEG++GGFG+HV  +LT  G+LDG LKLR++ +PDR+ +H +P  Q  ++ +  + I+  VL  L
Sbjct:  397 SFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ--PLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFGAHVATWLTNQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_RHIEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.869e-68
Identity = 131/238 (55.04%), Postives = 168/238 (70.59%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQR YDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD  F++ LP  VVMA +DEAEL HMV TAA  D  P  FR+PRG G+G  +P   +G  L+IGKGRI+ EG +VA+L +G+ +  C+LA+  L++  +S TVADARF KPLD +L+RQLA  HE+LITVEEGSVGGFGS V  +L+  G+LD  LK+RS+V+PD +++   P      + L    I +TV   L R
Sbjct:  395 TFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLATLPGFVVMAAADEAELKHMVRTAAAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKGRIVKEGTKVALLSFGTRLADCLLASEDLEAAGLSTTVADARFAKPLDHELLRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALRR 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_GLUOX (1-deoxy-D-xylulose-5-phosphate synthase OS=Gluconobacter oxydans GN=dxs PE=3 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 1.126e-67
Identity = 137/243 (56.38%), Postives = 165/243 (67.90%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDR-------VAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQVVHDV LQ LPVRFA+DRAGLVGADG TH GAFD+ ++ CLPNMVVMAPSDE EL+H  ATA   D  P  FR+PRGNGIG  LP   KG  LEIGKGRI+ E  R       VAIL  G  + + + AA+ L +Q + VTVADARF KP+D  L+  LA +HE+ IT+EEG++GGF S V   L  +G+LD  +K R M LPDRYIDH +   Q E++ L+  HI  T    L
Sbjct:  412 TFLQRAYDQVVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDLNYLCCLPNMVVMAPSDEVELLHATATACEYDAGPIAFRYPRGNGIGLDLP--EKGEVLEIGKGRIVREARRAPNARGGVAILSLGPRMHESLRAADQLAAQGVPVTVADARFAKPIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQHLAETGLLD-KVKFRPMALPDRYIDHNTQDAQYEDAGLTAPHIVRTAADAL 651          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_CAUCR (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus GN=dxs PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.126e-67
Identity = 133/236 (56.36%), Postives = 166/236 (70.34%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQVVHDV +Q LPVRFAMDRAGLVGADGPTH G+FD+ FM  LP MV+MA +DE EL  MVATAA IDDRPS FR+PRG G+G  +P      PLEIGKGRI+ EG  VAI+ +G+ + + + AA++L ++ +S TV DARF KPLD DL+ +LA EHE +ITVEEGS+GGFG+ V   L   G LD  LK+R++ LPD + D   P     ++ L    I    LS +
Sbjct:  393 TFLQRGYDQVVHDVAIQGLPVRFAMDRAGLVGADGPTHAGSFDIGFMGALPGMVLMAAADEVELARMVATAAEIDDRPSAFRYPRGEGLGLDMPA--IAEPLEIGKGRIVREGTSVAIVSFGTRLSESLKAADLLAARGLSATVCDARFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALDRGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEGILRGALSAM 626          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_CAUCN (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=dxs PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.126e-67
Identity = 133/236 (56.36%), Postives = 166/236 (70.34%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQVVHDV +Q LPVRFAMDRAGLVGADGPTH G+FD+ FM  LP MV+MA +DE EL  MVATAA IDDRPS FR+PRG G+G  +P      PLEIGKGRI+ EG  VAI+ +G+ + + + AA++L ++ +S TV DARF KPLD DL+ +LA EHE +ITVEEGS+GGFG+ V   L   G LD  LK+R++ LPD + D   P     ++ L    I    LS +
Sbjct:  393 TFLQRGYDQVVHDVAIQGLPVRFAMDRAGLVGADGPTHAGSFDIGFMGALPGMVLMAAADEVELARMVATAAEIDDRPSAFRYPRGEGLGLDMPA--IAEPLEIGKGRIVREGTSVAIVSFGTRLSESLKAADLLAARGLSATVCDARFAKPLDLDLLLRLAREHEAIITVEEGSMGGFGAFVLQALAQHGALDRGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEGILRGALSAM 626          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS2_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Jannaschia sp. (strain CCS1) GN=dxs2 PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 1.126e-67
Identity = 131/236 (55.51%), Postives = 169/236 (71.61%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            SFLQRGYDQ+VHDV LQ LPVRF +DRAGLVGADGPTH GAFD+ ++S LPNM VMA +DEAEL+HM+ATAA  +D P   R+PRG G G  LP  ++G  LEIGKGR++ +G  VAIL +G+ +++   AA  L+++ +SVTVADARF KPLDT LI  L  +H  LITVE+G+V GFG  V H L  +G LDG   +R++ LPDR+ID  SPA+   ++ L+   I+   L  +
Sbjct:  394 SFLQRGYDQIVHDVALQSLPVRFMIDRAGLVGADGPTHAGAFDIGYLSALPNMTVMACADEAELVHMMATAAAHNDGPIALRYPRGEGTGVALP--DQGDVLEIGKGRVIQDGHDVAILSFGAHLEEAKDAATALEARGLSVTVADARFAKPLDTTLIDDLMTKHSALITVEQGAVLGFGGLVLHHLAATGQLDGRCAVRTLHLPDRFIDQASPAEMYADAGLTADDIAQAALEAM 627          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_RHILW (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dxs PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.508e-67
Identity = 131/238 (55.04%), Postives = 164/238 (68.91%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQR YDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD  F++ LP  VVMA +DEAEL HMV TA   D  P  FR+PRG G+G  +P   +G  L IGKGRI+ EG +VA+L +G+ +  C+LAA  L +  +S TVADARF KPLD DLIRQ A  HE++ITVEEGSVGGFGS V  +L+  G+LD  LK+RS+V+PD +++   P      + L    I +TV   L R
Sbjct:  395 TFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFLTTLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPV--RGEILRIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQFARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_AGRRK (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=dxs PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.278e-67
Identity = 131/238 (55.04%), Postives = 164/238 (68.91%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQR YDQVVHDV +Q LPVRF +DRAG VGADGPTH G+FD TF++ LP  VVMA +DEAEL HMV TAA  D  P  FR+PRG G+G  +P   +G  LEIGKGRI+ +G +VA+L +G+ +   + AA  L +  +  TVADARF KPLD DLIRQLA+ HE+LIT+EEGSVGGFGS V  FL   G+LD  LK+R++V+PD +++   P      + L    I  TV   L R
Sbjct:  395 TFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFLATLPGFVVMAAADEAELKHMVRTAAAYDLGPISFRYPRGEGVGIEMP--ERGQILEIGKGRIVKQGSKVALLSFGTRLADSLAAAEDLDAAGLPTTVADARFAKPLDHDLIRQLASHHEVLITIEEGSVGGFGSQVMQFLASEGLLDNGLKIRTLVMPDIWVEQAKPEVMNAMAGLDRAGIVQTVFKALGR 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS2_RHORT (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dxs2 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.587e-67
Identity = 128/236 (54.24%), Postives = 166/236 (70.34%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            SFLQRGYDQVVHDV LQKLPVRFA+DRAG VGADG TH G FD+ F+ CLPN+VVM  +DEAEL  MV TAA  D  P   R+PRG G+G  +P + +  PL IGKGRI+ EG  VA+L  G+ +Q C+ A  +L ++ ++ TVADARF KP D +L+  LA  HE+LI VEEG++GGF SHV  +L   G+LDG LKLR++ +PDR+ +H +P  Q  ++ +  + I+  VL  L
Sbjct:  397 SFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ--PLAIGKGRIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEEGAIGGFCSHVATWLANQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLDAL 630          
The following BLAST results are available for this feature:
BLAST of EY710995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS2_ROSDO1.737e-6856.781-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseo... [more]
DXS1_RHORT2.962e-6854.661-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodo... [more]
DXS_RHIEC3.869e-6855.041-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobi... [more]
DXS_GLUOX1.126e-6756.381-deoxy-D-xylulose-5-phosphate synthase OS=Glucono... [more]
DXS_CAUCR1.126e-6756.361-deoxy-D-xylulose-5-phosphate synthase OS=Cauloba... [more]
DXS_CAUCN1.126e-6756.361-deoxy-D-xylulose-5-phosphate synthase OS=Cauloba... [more]
DXS2_JANSC1.126e-6755.511-deoxy-D-xylulose-5-phosphate synthase 2 OS=Janna... [more]
DXS_RHILW2.508e-6755.041-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobi... [more]
DXS_AGRRK4.278e-6755.041-deoxy-D-xylulose-5-phosphate synthase OS=Agrobac... [more]
DXS2_RHORT5.587e-6754.241-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-E05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710995 ID=EY710995; Name=EY710995; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGATCATTTCTGCAAAGAGGATATGATCAGGTTGTACATGA
TGTAGACCTTCAAAAATTACCAGTCCGCTTTGCAATGGATCGAGCTGGTT
TGGTTGGTGCGGATGGACCTACTCACTGTGGAGCATTTGACGTCACATTC
ATGTCTTGCTTGCCCAACATGGTGGTCATGGCTCCATCTGATGAAGCTGA
GCTAATGCACATGGTCGCTACCGCAGCAGTTATAGATGACAGGCCCAGCT
GTTTCAGATTTCCAAGGGGCAACGGAATTGGAGCAGTTCTCCCGCCTAAT
AACAAAGGAACTCCACTTGAGATTGGGAAAGGAAGAATCCTAATGGAAGG
CGATAGAGTGGCAATTTTGGGCTATGGTTCTATAGTCCAACAATGTGTGC
TAGCTGCGAACATGCTTAAGAGCCAAGACATTTCCGTGACAGTGGCTGAT
GCAAGATTTTGCAAACCTTTGGATACAGACCTCATTAGACAGTTGGCCAA
TGAGCATGAAATCCTAATTACTGTGGAAGAGGGTTCTGTGGGAGGCTTTG
GCTCTCATGTATGTCACTTTCTAACCTTAAGTGGCATTCTGGATGGACCT
CTCAAGTTGAGATCAATGGTGCTTCCTGATAGATACATCGACCATGGATC
ACCAGCCGATCAGCTTGAAGAATCANGGCTCTCCCTCAGGCATATCTCTG
CAACAGTCTTATCTCTCTTANGGAGGCCAAAAGAAGCCCTTCTGATTTAA
GTATCATACAAATCAAACAGCATCTTGCCCTTTGGATCCACTTTACATCC
NAGNNNTGGGGTGTATACACTANCAGGTCCCACTCTAGATCTTTACCTCA
TATCCCCNTGTACATGAGCATTACGTGGGATATAAAAGTATGGT
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