EY710995

Overview
NameEY710995
Unique NameEY710995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 7.296e-67
Identity = 130/243 (53.50%), Postives = 169/243 (69.55%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXRPKEAL 741
            +FLQR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FD+T+++ LPNMVVMA +DEAEL+HMV TAAV D  P   R+PRGNG+G  LP   +   L IGKGRI+ EG  VA+L  G+ + + + AA+ L +  +S TVAD RF KPLD  +I+ L   HE+ +T+EEG++GG G+HV    +  G++DG LKLR+M LPD + +H  P  Q  E+ L    I ATVL+ L R  + L
Sbjct:  395 TFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMVHTAAVHDSGPIALRYPRGNGVGVALPAAPE--RLAIGKGRIVREGKTVALLSLGTRLGEALRAADQLDALGLSTTVADLRFAKPLDEAMIQTLLTSHEVAVTIEEGAIGGLGAHVLTLASDLGLIDGGLKLRTMRLPDAFQEHDKPEKQYAEAGLDAESIVATVLAALHRNSKGL 635          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_ERYLH (1-deoxy-D-xylulose-5-phosphate synthase OS=Erythrobacter litoralis (strain HTCC2594) GN=dxs PE=3 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 7.296e-67
Identity = 127/236 (53.81%), Postives = 169/236 (71.61%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FDVT+++ LPN VVMA +DEAEL+HM  TAA  D  P  FR+PRG GIG  LP   +   LEIGKGRI+  G +VA+L  G+ +++   AA+ L+++ +S T+AD RF KPLDT+LI QL   HE+++T+EE S+GG G+HV  + +  G+ D  LK+R+M LPD +I+  +P  Q +E+ L+  HI  TVL  L
Sbjct:  395 TFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYLATLPNFVVMAAADEAELVHMTYTAAEHDSGPIAFRYPRGGGIGIDLPETPE--KLEIGKGRIVKHGSKVALLSLGTRLEEAKRAADELEAKGLSTTIADMRFAKPLDTELIAQLMKNHEVVVTIEEASIGGLGAHVLTYASDEGLTDAGLKIRTMRLPDAFIEQDAPEKQYDEAGLTAPHIVDTVLKAL 628          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_XANP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 9.529e-67
Identity = 139/244 (56.97%), Postives = 170/244 (69.67%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILM---EGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILD-GPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXRPK 732
            +FLQR YDQVVHDV LQ LPVRF +DRAGLVGADG TH GAFD+ F++CLP M VMAP+DEAEL+HM+AT    DD PS  RFPRG G+G   P   +G  L IGKGRI+    EGD +A+L  G+ +  C+ AA  L++   +VTVADARF KPLD +L+ +LA  H  L+TVEEGSVGGFGSHV   +T  G+LD G +K+R+MVLPD YID  + A QL  + L    I A V  LL + K
Sbjct:  394 TFLQRAYDQVVHDVALQGLPVRFIIDRAGLVGADGATHAGAFDIAFLACLPGMTVMAPADEAELVHMMATMVAFDDGPSAVRFPRGEGVGVERP--ERGEVLPIGKGRIVHGTGEGD-IALLSLGTRLAACLDAAERLEAAGFTVTVADARFAKPLDRELVLKLAAGHGALVTVEEGSVGGFGSHVLQLVTDEGLLDRGAVKVRAMVLPDIYIDQETQARQLAAAGLDADAIVAKVEGLLGKAK 634          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_RHOCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodobacter capsulatus GN=dxs PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.245e-66
Identity = 131/245 (53.47%), Postives = 170/245 (69.39%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXRPKEALLI 747
            SF+QRGYDQ+VHDV LQ LPVR  +DRAGLVG DG TH GAFDV+ ++ LPN  VMA +DEAEL HMV TAA  D  P   R+PRG G G  +P   +G  LEIGKGR++ EG  VAIL +G+ + Q + AA ML+++ +S TVADARFC+PLDTDLI +L   H  LIT+E+G++GGFG+ V H+L  +G L+    +R+M LPD YIDHGSP +    + L+   I  T L+   RP +++ I
Sbjct:  396 SFVQRGYDQLVHDVALQNLPVRLMIDRAGLVGQDGATHAGAFDVSMLANLPNFTVMAAADEAELCHMVVTAAAHDSGPIALRYPRGEGRGVEMP--ERGEVLEIGKGRVMTEGTEVAILSFGAHLAQALKAAEMLEAEGVSTTVADARFCRPLDTDLIDRLIEGHAALITLEQGAMGGFGAMVLHYLARTGQLEKGRAIRTMTLPDCYIDHGSPEEMYAWAGLTANDIRDTALA-AARPSKSVRI 637          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS1_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs1 PE=3 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 8.067e-66
Identity = 129/239 (53.97%), Postives = 166/239 (69.46%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGD-RVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQRGYDQ+VHDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++  LP MVVMA +DEAEL+HMVATA   +D P  FR+PRGNG G  LP    G  LEIGKGR++ EGD  VAIL  G+++  C  AA +L+++ I+ T+ADARF KPLD  LI  L   H+ LITVE+G++ GFG+ V   +   G+LD   K+R+M LPDR+ID  +PA+   ++ L    I   V  +L R
Sbjct:  397 TFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGATHAGSFDIGYLGALPGMVVMAAADEAELVHMVATAGAHNDGPIAFRYPRGNGTGVPLP--ETGRVLEIGKGRMIREGDGEVAILSLGTLLSDCEAAARILEAEGINATIADARFAKPLDMALIANLVQTHKALITVEQGAMAGFGAMVLQSMAAEGLLDLGCKVRTMCLPDRFIDQAAPAEMYRDAGLDTMGIVEQVTRVLGR 633          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SPHAL (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingopyxis alaskensis GN=dxs PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.197e-63
Identity = 125/236 (52.97%), Postives = 164/236 (69.49%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FD+T+++ LPNMVVMA +DEAEL+HM  TAA  D  P  FR+PRGNG G  LP   +   LEIGKGR++ EG  VAIL  G+ + + + AA+ L+++ +S +V D RF KPLD +LIR+    HE+ +TVEEGS+GG G+HV    +  G++D  LKLR++ LPD + D   P  Q + + L+   I  TVL  L
Sbjct:  395 TFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITYLATLPNMVVMAAADEAELVHMTYTAAEHDAGPIAFRYPRGNGTGVALPAVPQ--KLEIGKGRVVREGKTVAILSLGTRLAEALKAADTLEARGLSTSVIDLRFAKPLDEELIRRTLAAHEVCVTVEEGSIGGLGAHVLTLASDEGLIDAGLKLRTLRLPDMFQDQDKPELQYDAAGLNAPQIVDTVLKAL 628          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS1_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Zymomonas mobilis GN=dxs1 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.615e-60
Identity = 121/238 (50.84%), Postives = 160/238 (67.23%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD+ FM  LPNMVVMAPSDE EL +MV + A  D  P   R+PRGNG+G  L    +  P  IGKGR++  G +VAIL  G+ +++ + AA+ L +Q +S +VAD RF KPLD  L RQL   H+++IT+EEG++GGF + V    +  G++D  LK+R++ LPDR+        Q  E+ L    I A V+S L R
Sbjct:  395 TFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSLEGEKEILP--IGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVISALHR 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS2_ZYMMO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Zymomonas mobilis GN=dxs2 PE=3 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 3.283e-59
Identity = 120/238 (50.42%), Postives = 159/238 (66.81%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQRGYDQ+VHDV +Q LPVRFA+DRAGLVGADG TH G+FD+ FM  LPNMVVMAPSDE EL +MV + A  D  P   R+PRGNG+G  L    +  P  IGKGR++  G +VAIL  G+ +++ + AA+ L +Q +S +VAD RF KPLD  L RQL   H+++IT+EEG++GGF + V    +  G++D  LK+R++ LPDR+        Q  E+ L    I A V + L R
Sbjct:  395 TFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFMVNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSLEGEKEILP--IGKGRLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQVIITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADGIVAAVTAALQR 630          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_CYAP8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=dxs PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.208e-53
Identity = 111/246 (45.12%), Postives = 150/246 (60.98%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXRPKEALLI 747
            +FLQR YDQV+HDV +Q LPV F MDRAG+VGADGPTH G +D+ ++ C+PNM +MAP DEAEL  M+ T     D P   R+PRGNGIG  L       PL IGKG IL  GD + ILGYG++V   + AA  L+   I  TV +ARF KPLDT+LI  LA     ++T+EEG  +GGFGS V    +   +L   + L+   +PDR +DH +P     +  L+   I+  +L +    ++  ++
Sbjct:  394 TFLQRAYDQVLHDVCIQNLPVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMIVTGVNYTDGPIAMRYPRGNGIGVPLMEEG-WEPLPIGKGEILRNGDDLLILGYGTMVNTALQAAETLREHGIEATVVNARFVKPLDTELILPLAQRIGKVVTLEEGCLMGGFGSAVAEAFSDHNVL---VPLKRFGVPDRLVDHATPDQSKADLGLTSPQIAEQILQVFFSNRQPSMV 635          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_ALHEH (1-deoxy-D-xylulose-5-phosphate synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=dxs PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.208e-53
Identity = 116/224 (51.79%), Postives = 154/224 (68.75%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXL 681
            +FLQRGYDQ+VHDV LQ LPV FA+DRAGLVGADGPTH G+FD++++ C+PNM + APSDEAE   +++T     D P   R+PRG+G GA LP  +   PL IGKG     G R+A+L +G++V   +  A  L      +TVAD RF +PLD  LIR+LA+ H++L+TVEE +V GG GS V  +L  +G LD P  +R + LPDR++DHG+PA+ L E  L
Sbjct:  394 TFLQRGYDQLVHDVALQNLPVLFAVDRAGLVGADGPTHHGSFDLSYLRCVPNMTIAAPSDEAECWRLLST-GYHHDGPFAVRYPRGSGPGAALPEADL-DPLAIGKGVCRRRGRRIAVLAFGTLVVPALAVAEAL-----DLTVADMRFVRPLDEALIRELADTHDLLVTVEENAVAGGAGSGVSEYLARAG-LDVP--VRHLGLPDRFVDHGTPAELLAEVGL 607          
The following BLAST results are available for this feature:
BLAST of EY710995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_SPHWW7.296e-6753.501-deoxy-D-xylulose-5-phosphate synthase OS=Sphingo... [more]
DXS_ERYLH7.296e-6753.811-deoxy-D-xylulose-5-phosphate synthase OS=Erythro... [more]
DXS_XANP29.529e-6756.971-deoxy-D-xylulose-5-phosphate synthase OS=Xanthob... [more]
DXS_RHOCA1.245e-6653.471-deoxy-D-xylulose-5-phosphate synthase OS=Rhodoba... [more]
DXS1_ROSDO8.067e-6653.971-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseo... [more]
DXS_SPHAL2.197e-6352.971-deoxy-D-xylulose-5-phosphate synthase OS=Sphingo... [more]
DXS1_ZYMMO6.615e-6050.841-deoxy-D-xylulose-5-phosphate synthase 1 OS=Zymom... [more]
DXS2_ZYMMO3.283e-5950.421-deoxy-D-xylulose-5-phosphate synthase 2 OS=Zymom... [more]
DXS_CYAP81.208e-5345.121-deoxy-D-xylulose-5-phosphate synthase OS=Cyanoth... [more]
DXS_ALHEH1.208e-5351.791-deoxy-D-xylulose-5-phosphate synthase OS=Alkalil... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-E05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710995 ID=EY710995; Name=EY710995; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGATCATTTCTGCAAAGAGGATATGATCAGGTTGTACATGA
TGTAGACCTTCAAAAATTACCAGTCCGCTTTGCAATGGATCGAGCTGGTT
TGGTTGGTGCGGATGGACCTACTCACTGTGGAGCATTTGACGTCACATTC
ATGTCTTGCTTGCCCAACATGGTGGTCATGGCTCCATCTGATGAAGCTGA
GCTAATGCACATGGTCGCTACCGCAGCAGTTATAGATGACAGGCCCAGCT
GTTTCAGATTTCCAAGGGGCAACGGAATTGGAGCAGTTCTCCCGCCTAAT
AACAAAGGAACTCCACTTGAGATTGGGAAAGGAAGAATCCTAATGGAAGG
CGATAGAGTGGCAATTTTGGGCTATGGTTCTATAGTCCAACAATGTGTGC
TAGCTGCGAACATGCTTAAGAGCCAAGACATTTCCGTGACAGTGGCTGAT
GCAAGATTTTGCAAACCTTTGGATACAGACCTCATTAGACAGTTGGCCAA
TGAGCATGAAATCCTAATTACTGTGGAAGAGGGTTCTGTGGGAGGCTTTG
GCTCTCATGTATGTCACTTTCTAACCTTAAGTGGCATTCTGGATGGACCT
CTCAAGTTGAGATCAATGGTGCTTCCTGATAGATACATCGACCATGGATC
ACCAGCCGATCAGCTTGAAGAATCANGGCTCTCCCTCAGGCATATCTCTG
CAACAGTCTTATCTCTCTTANGGAGGCCAAAAGAAGCCCTTCTGATTTAA
GTATCATACAAATCAAACAGCATCTTGCCCTTTGGATCCACTTTACATCC
NAGNNNTGGGGTGTATACACTANCAGGTCCCACTCTAGATCTTTACCTCA
TATCCCCNTGTACATGAGCATTACGTGGGATATAAAAGTATGGT
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