EY710995

Overview
NameEY710995
Unique NameEY710995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_DECAR (1-deoxy-D-xylulose-5-phosphate synthase OS=Dechloromonas aromatica (strain RCB) GN=dxs PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.630e-52
Identity = 115/233 (49.36%), Postives = 149/233 (63.95%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATV 708
            +FLQRGYDQ+VHDV LQ LPV FA+DR GLVGADGPTH G FD++F++C+PNM VMAP+DEAE   M++TA  ID  PS  R+PRG+G G +  P  K   L +GKG I   G  +A+L +GS+V     AA +   +++  TVA+ RF KPLD DLI +LA  H +L+++EE +V GG GS +   L   G+    L+L    LPDR+IDHG     L E  L    I   V
Sbjct:  390 TFLQRGYDQLVHDVALQNLPVIFAVDRGGLVGADGPTHHGTFDLSFVTCIPNMTVMAPADEAECRKMLSTAMTIDG-PSMVRYPRGSGTGTI--PEAKLDTLPVGKGDIRRRGKDIALLAFGSLV-----AAAVAAGEELDATVANMRFIKPLDADLIVELAGNHSLLVSIEENAVIGGAGSEIERVLAERGLQVPVLRLG---LPDRFIDHGEQGQLLAELGLDKEGIVRAV 611          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_ANASP (1-deoxy-D-xylulose-5-phosphate synthase OS=Anabaena sp. (strain PCC 7120) GN=dxs PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.630e-52
Identity = 109/234 (46.58%), Postives = 149/234 (63.68%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVL 711
            +FLQR YDQ++HDV +Q LPV F +DRAG+VG+DGPTH G +D+ ++ C+PN+V+MAP DEAE+  MV T       P   RFPRGNG G  L       PLEIGKG IL  GD V I+GYG++V   + AA +L    I  TV +ARF KPLDT+LI  LA +   ++T+EEG V GGFGS V   L  + ++   + ++ + +PD  ++H +P +   E  L+ R I+  VL
Sbjct:  394 TFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGSDGPTHQGMYDIAYLRCIPNIVMMAPKDEAEMQRMVVTGIEHTTGPIAMRFPRGNGYGVPLMEEG-WEPLEIGKGEILRNGDDVLIIGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPLAQKIGRVVTLEEGCVMGGFGSAVAEALLDADVV---VPVKRIGIPDVLVEHATPDESKAELGLTSRQIAERVL 623          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_VIBPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio parahaemolyticus GN=dxs PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.659e-52
Identity = 111/239 (46.44%), Postives = 158/239 (66.11%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQRGYDQ++HD+ +  LPV FA+DRAGLVGADG TH GAFD++FM C+PNMV+MAPSDE E   M+ T       PS  R+PRG+G+G  +    + T LEIGKGR++ +G++VAIL +G+ +   + AA     ++++ TVAD RF KPLD  LIRQLA+EH++L+T+EE ++ GG G+ V  F+    I+   L L    LPD++I  G+  +  EE  L  + I  ++   L +
Sbjct:  394 TFLQRGYDQLIHDIAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHK-HTGPSAVRYPRGSGMGTEI--EKEFTALEIGKGRVVRKGEKVAILSFGTFLPNALEAA-----KNLNATVADMRFVKPLDEALIRQLADEHDVLVTLEENAIAGGAGAGVIEFMMKEKIIKPVLNLG---LPDKFIHQGTQEELHEELGLDAKGIEKSIAEYLAK 621          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_CYAP4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxs PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.477e-51
Identity = 111/240 (46.25%), Postives = 149/240 (62.08%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXRP 729
            +FLQR YDQ+VHDV +Q LPV F MDRAG+VGADGPTH G +D+ ++ CLPNMV+MAP DEAEL  M+ T     D P   R+PRGNG G  L       PL IGK  +L +GD + +L YGS+V   + AA +L+   I+ TV +ARF KPLDT+LI  LA +   ++TVEEG  +GGFGS V   L    IL   + +  + +PD  ++H +P     +  L+   I+  VL+   +P
Sbjct:  392 TFLQRAYDQIVHDVCIQSLPVLFCMDRAGIVGADGPTHQGMYDIAYLRCLPNMVLMAPKDEAELQQMLVTGINYMDGPIGLRYPRGNGYGVALMEEG-WEPLPIGKAEVLRQGDDLLMLAYGSMVYPTLQAAEILREHGIAATVVNARFAKPLDTELILPLAEKLGRVVTVEEGCLIGGFGSAVLEALQDQEIL---VPVTRIGIPDILVEHATPDQSKAQLGLTSAQIAERVLAKTQQP 627          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SYNJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxs PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.929e-51
Identity = 107/227 (47.14%), Postives = 144/227 (63.44%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLK--LRSMVLPDRYIDHGSPADQLEESXLS 684
            +FLQR YDQ++HDV +QKLPV F +DRAG+VGADGPTH G +D+ ++ C+P MV+MAP DEAEL  MV T       P   R+PRG G+G  L       P+ IGK  +L  G  V IL YGS+V   + AA +LK   IS TV +ARF KPLDT+LI  LA +  +++TVEEG  +GGFGS V        +LD  ++  L  + +PD +++H +P + L E  L+
Sbjct:  399 TFLQRAYDQIIHDVCIQKLPVFFCLDRAGVVGADGPTHQGMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQYTKGPIAMRYPRGAGVGVPLAEEG-WEPIPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISTTVVNARFAKPLDTELILPLAQQSRLVVTVEEGCLMGGFGSAVG-----EALLDADIRVPLLRLGVPDVWVEHATPEESLAELGLN 619          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_THERP (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=dxs PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.290e-51
Identity = 114/237 (48.10%), Postives = 148/237 (62.45%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQV+HDV +QKLPV FAMDRAGLVG DG TH G FDV ++ CLPNMV+MAP DE EL HM+ATA   ++ P   R+PRG+G+G  +P   +   L IG+  +L EG  VAI+  G+ V     AA++L  + I  TV +ARF KPLD  LI   A E   L+TVEE  + GGFGS V   L  +G+L   L+L    L DR+ DH S A    ++ +    I++  L+ L
Sbjct:  384 TFLQRAYDQVIHDVCIQKLPVVFAMDRAGLVGEDGRTHHGVFDVAYLRCLPNMVLMAPKDEDELRHMLATALAYEEGPIALRYPRGSGVG--VPMLGEPRVLPIGRAELLREGSDVAIVALGATVLPAERAADILAERGIRATVINARFVKPLDRSLILDAARECGCLVTVEEAQLAGGFGSAVLETLADAGLLIPVLRLG---LADRFFDHASQASLRRQAGIDAESIASRTLAFL 615          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHEON (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella oneidensis GN=dxs PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.290e-51
Identity = 111/237 (46.84%), Postives = 150/237 (63.29%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E   M+ T    D  PS  R+PRG+  GA        T L IGKG I   G R+A+L +G+      LAA +  ++ +  TV D RF KPLD DL++++A  H++L+TVEE ++ GG GS V   L L   L  P  +  + LPD +I HGSP + + +  L    + A + + L
Sbjct:  394 TFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAT--QVEAMTALPIGKGVIKRLGKRIALLNFGT-----TLAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGV---LELLQQLKMPKPVLQIGLPDEFIKHGSPDEVIHDLQLDAEGMLAQINAYL 620          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_CUPTR (1-deoxy-D-xylulose-5-phosphate synthase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=dxs PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.297e-51
Identity = 116/238 (48.74%), Postives = 154/238 (64.71%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-----GDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATV 708
            +FLQRGYDQ++HDV LQ LPV FA+DRAGLVGADG TH GA+D+ ++ C+PNM+VM PSDE E   ++ T A   D P+  R+PRG+G GA +  +    P+ +GKG +  E     G RV  L +GS+VQ  + AA  L       TVAD RF KPLD  L+++LA +H+ L+TVEEGSV GG GS V   L  +GI D P  + ++ LPDR++DHG PA  L++  L    I  +V
Sbjct:  394 TFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAYLRCIPNMMVMTPSDENECRQLL-TTAFQQDCPTAVRYPRGSGPGAAIAADL--APVPVGKGVVRREAGARAGHRVGFLAFGSMVQPALGAAEAL-----DATVADMRFVKPLDVALVKRLAADHDYLVTVEEGSVMGGAGSAVLEALAEAGI-DKP--VLTLGLPDRFVDHGDPAFLLQQCGLDAAGIERSV 620          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHESR (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain MR-7) GN=dxs PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.613e-51
Identity = 111/237 (46.84%), Postives = 149/237 (62.87%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E   M+ T    D  PS  R+PRG+  GA        T L IGKG I   G R+A+L +G+      LAA +  ++ +  TV D RF KPLD DL++++A  H++L+TVEE ++ GG GS V   L L   L  P  +  + LPD +I HGSP +   +  L    + A + + L
Sbjct:  394 TFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAT--QVEAMTALPIGKGVIKRLGKRIAMLNFGT-----TLAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGV---LELLQKLKMPKPVLQIGLPDEFIKHGSPEEVTHDLQLDAEGMLAQINAFL 620          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHESM (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella sp. (strain MR-4) GN=dxs PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.613e-51
Identity = 111/237 (46.84%), Postives = 149/237 (62.87%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E   M+ T    D  PS  R+PRG+  GA        T L IGKG I   G R+A+L +G+      LAA +  ++ +  TV D RF KPLD DL++++A  H++L+TVEE ++ GG GS V   L L   L  P  +  + LPD +I HGSP +   +  L    + A + + L
Sbjct:  394 TFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAT--QVEAMTALPIGKGVIKRLGKRIAMLNFGT-----TLAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGV---LELLQKLKMPKPVLQIGLPDEFIKHGSPEEVTHDLQLDAEGMLAQINAFL 620          
The following BLAST results are available for this feature:
BLAST of EY710995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_DECAR6.630e-5249.361-deoxy-D-xylulose-5-phosphate synthase OS=Dechlor... [more]
DXS_ANASP6.630e-5246.581-deoxy-D-xylulose-5-phosphate synthase OS=Anabaen... [more]
DXS_VIBPA8.659e-5246.441-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio ... [more]
DXS_CYAP41.477e-5146.251-deoxy-D-xylulose-5-phosphate synthase OS=Cyanoth... [more]
DXS_SYNJA1.929e-5147.141-deoxy-D-xylulose-5-phosphate synthase OS=Synecho... [more]
DXS_THERP3.290e-5148.101-deoxy-D-xylulose-5-phosphate synthase OS=Thermom... [more]
DXS_SHEON3.290e-5146.841-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_CUPTR4.297e-5148.741-deoxy-D-xylulose-5-phosphate synthase OS=Cupriav... [more]
DXS_SHESR5.613e-5146.841-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_SHESM5.613e-5146.841-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-E05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710995 ID=EY710995; Name=EY710995; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGATCATTTCTGCAAAGAGGATATGATCAGGTTGTACATGA
TGTAGACCTTCAAAAATTACCAGTCCGCTTTGCAATGGATCGAGCTGGTT
TGGTTGGTGCGGATGGACCTACTCACTGTGGAGCATTTGACGTCACATTC
ATGTCTTGCTTGCCCAACATGGTGGTCATGGCTCCATCTGATGAAGCTGA
GCTAATGCACATGGTCGCTACCGCAGCAGTTATAGATGACAGGCCCAGCT
GTTTCAGATTTCCAAGGGGCAACGGAATTGGAGCAGTTCTCCCGCCTAAT
AACAAAGGAACTCCACTTGAGATTGGGAAAGGAAGAATCCTAATGGAAGG
CGATAGAGTGGCAATTTTGGGCTATGGTTCTATAGTCCAACAATGTGTGC
TAGCTGCGAACATGCTTAAGAGCCAAGACATTTCCGTGACAGTGGCTGAT
GCAAGATTTTGCAAACCTTTGGATACAGACCTCATTAGACAGTTGGCCAA
TGAGCATGAAATCCTAATTACTGTGGAAGAGGGTTCTGTGGGAGGCTTTG
GCTCTCATGTATGTCACTTTCTAACCTTAAGTGGCATTCTGGATGGACCT
CTCAAGTTGAGATCAATGGTGCTTCCTGATAGATACATCGACCATGGATC
ACCAGCCGATCAGCTTGAAGAATCANGGCTCTCCCTCAGGCATATCTCTG
CAACAGTCTTATCTCTCTTANGGAGGCCAAAAGAAGCCCTTCTGATTTAA
GTATCATACAAATCAAACAGCATCTTGCCCTTTGGATCCACTTTACATCC
NAGNNNTGGGGTGTATACACTANCAGGTCCCACTCTAGATCTTTACCTCA
TATCCCCNTGTACATGAGCATTACGTGGGATATAAAAGTATGGT
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