EY710995

Overview
NameEY710995
Unique NameEY710995
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_MICAN (1-deoxy-D-xylulose-5-phosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=dxs PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.613e-51
Identity = 106/242 (43.80%), Postives = 147/242 (60.74%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXRPKE 735
            +FLQR +DQ++HD+ +Q LPV F MDRAG+VGADGPTH G +D+ ++ C+PNM +MAP DEAEL  MV T       P   R+PRGNG+G  L        L IGKG IL  GD + +LGYG++V   +  A +L    I  TV +ARF KPLDT+LI  LA     ++T+EEG  +GGFGS V   L  + IL   + ++   +PD+ +DH +P +   +  L+   I+  VL+     K+
Sbjct:  394 TFLQRAFDQIIHDICIQNLPVFFCMDRAGIVGADGPTHQGMYDIAYLRCIPNMTIMAPKDEAELQRMVVTGINHTSGPIAMRYPRGNGLGVPLMEEG-WEALPIGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEHGIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAVLEALQDANIL---VPVKRFGVPDKLVDHATPEESFADLGLTSPQIAQQVLAAFFSQKQ 631          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_VIBHB (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dxs PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.330e-51
Identity = 112/239 (46.86%), Postives = 156/239 (65.27%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            +FLQRGYDQ++HDV +  LPV FA+DRAGLVGADG TH GAFD++FM C+PNMV+MAPSDE E   M+ T       PS  R+PRG+G+G  +      T LEIGKGRI+ +G++VAIL +G+ +   + AA     ++++ TVAD RF KPLD  LIRQLA EH++L+T+EE ++ GG G+ V  F+    I+   L L    LPDR++  G+  +  E+  L  + I  ++   L +
Sbjct:  394 TFLQRGYDQLIHDVAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHK-HTGPSAVRYPRGSGMGTDI--EKDFTALEIGKGRIVRKGEKVAILSFGTFLGNALEAA-----ENLNATVADMRFVKPLDEALIRQLAAEHDVLVTLEENAIAGGAGAGVIEFMMQDKIIKPVLNLG---LPDRFVPQGTQDELHEDLGLDAKGIEKSINDYLAK 621          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_CYAA5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=dxs PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.330e-51
Identity = 105/236 (44.49%), Postives = 146/236 (61.86%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSL 717
            +FLQR YDQV+HDV +Q LPV F +DRAG+VGADGPTH G +D+ ++ C+PN+ +MAP DEAEL  MV T     D P   R+PRG+G+G  L       P+ IGKG IL  GD V ++GYG++V Q +  A +LK   I  TV +ARF KPLDT+LI  LA     ++T+EEG  +GGFGS V   L    ++   + ++   +PD+ +DH  P +   +  L+   I+  +  L
Sbjct:  394 TFLQRAYDQVLHDVCIQNLPVFFCLDRAGIVGADGPTHQGLYDIAYLRCIPNLTIMAPKDEAELQRMVVTGINHTDGPIAMRYPRGSGVGVPLMEEG-WEPVSIGKGEILRNGDDVLLVGYGTMVHQSLQVAEILKEHGIEATVVNARFVKPLDTELIVPLAQRIGKVVTLEEGCLMGGFGSAVAEALLDHDVV---VPIKRFGVPDKLVDHAKPDESKADLGLTSPQIAEEIRQL 625          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_CHRVO (1-deoxy-D-xylulose-5-phosphate synthase OS=Chromobacterium violaceum GN=dxs PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.330e-51
Identity = 112/216 (51.85%), Postives = 140/216 (64.81%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPA 657
            +FLQRGYDQ++HDV LQ LPV FA+DRAGLVGADGPTH GAFD++++ C+PNM VMAPSDE E   ++ TA  + D P+  R+PRG G GA +       P  IGKG +   G +VAIL +GS+V   + AA  L       TVAD RF KPLD +LIR+LA  HE+++TVEE  V GG GS     L   G+    L L    LPD Y++HG PA
Sbjct:  389 TFLQRGYDQLIHDVALQNLPVMFALDRAGLVGADGPTHAGAFDLSYLRCIPNMTVMAPSDENECRQLLYTAFQL-DTPTAVRYPRGTGPGAEIQQQMAALP--IGKGVVRRRGKQVAILAFGSMVHPALAAAEAL-----DATVADMRFVKPLDAELIRKLAQTHELIVTVEENVVMGGAGSGCGEALQAMGLAVPTLHLG---LPDDYVEHGDPA 593          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_TRIEI (1-deoxy-D-xylulose-5-phosphate synthase OS=Trichodesmium erythraeum (strain IMS101) GN=dxs PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.574e-51
Identity = 108/234 (46.15%), Postives = 144/234 (61.54%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGS-VGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVL 711
            +FLQR YDQ++HDV +QKLPV F +DRAG+VGADGPTH G +D+ ++ C+PNMVVMAP DE EL  MV T     D     R+PRGNG G  L        + IGKG IL  GD V ILGYGS+V   +  A +L    ++ TV +ARF KPLDT+LI  LA     ++T+EEG  +GGFGS V   L  + +L   L+L    +PD+ +DH  P +   +  L+   ++  +L
Sbjct:  394 TFLQRAYDQIIHDVCIQKLPVFFCLDRAGIVGADGPTHQGMYDIAYLRCIPNMVVMAPKDEGELQRMVLTGIKHTDGAIAMRYPRGNGYGVPLMEEG-WEAITIGKGEILRNGDDVLILGYGSMVYSAMQTAEILSEHGVAATVVNARFVKPLDTELILPLAQRIGQVVTMEEGCLMGGFGSAVTEALMDNNVLVPVLRLG---VPDKLVDHAKPDESKADLGLTPSQMAERIL 623          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHEB9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS195) GN=dxs PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.133e-50
Identity = 110/237 (46.41%), Postives = 149/237 (62.87%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E   M+ T    D  PS  R+PRG+  GA+       T L IGKG I   G R+AIL +G++     LA+ +  ++ +  TV D RF KPLD DL++++A  HE+L+TVEE ++ GG G+ V   L     L  P  +  + LPD +I HGSP +   +  L    I A + + L
Sbjct:  394 TFLQRAYDQLIHDVALQQLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAM--QVEAMTALPIGKGVIKRVGKRIAILNFGTL-----LASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGAGVLEQLQK---LRMPKAVLQIGLPDEFIKHGSPEEVTHDLQLDAEGILAQINAYL 620          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHEAM (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=dxs PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.133e-50
Identity = 109/239 (45.61%), Postives = 150/239 (62.76%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLLXR 726
            SFLQRGYDQ++HDV LQ+LPV FA+DR G+VGADG TH GAFD+++M C+PNMV+MAPSDE E   M  T    ++ PS  R+PRG+  GA      + T L IGKG +  +G ++AIL +G+      LAA +  ++ ++ TVAD RF KPLD  L+ +LA  H++L+TVEE ++ GG GS V  FL     L   L++    +PD +I HG P + L E  L    I   + + + R
Sbjct:  394 SFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGATHQGAFDLSYMRCIPNMVIMAPSDENECRQMFYTGYCYNEGPSAVRYPRGSATGA--EQIEEMTALPIGKGVMRRQGQKIAILNFGT-----TLAAALTAAESLNATVADMRFVKPLDEALLLELAASHDVLVTVEENAIMGGAGSGVLEFLASKNRLKPLLQIG---IPDEFIKHGGPEEILSELGLDAAGIEGQIRAFIER 622          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_RALME (1-deoxy-D-xylulose-5-phosphate synthase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dxs PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.133e-50
Identity = 113/238 (47.48%), Postives = 149/238 (62.61%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILME-----GDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEG-SVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATV 708
            +FLQRGYDQ++HDV LQ LPV FA+DRAGLVGADG TH G +D+ F+ C+PNM+VM P+DE E   ++ T A   D P+  R+PRG G+G    P  + T L +GKG I  E     G RVAI+ +GS+V   + AA     + +  TVA+ RF KPLD +L++QLA  H+ L+TVEEG ++GG GS V   L  +GI    L    + LPD++IDHG PA  L    L    I  +V
Sbjct:  394 TFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGVYDIPFLRCIPNMMVMVPADENECRQLL-TTAFQQDCPTAVRYPRGAGVGVATQP--ELTALPVGKGEIRREGHARAGQRVAIMAFGSMVHPALTAA-----EQLDATVANMRFVKPLDVELVKQLAANHDFLVTVEEGATMGGAGSAVLEALAEAGI---ELPTLVLGLPDKFIDHGDPAHLLSLCGLDAAGIERSV 620          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHEHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella halifaxensis (strain HAW-EB4) GN=dxs PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.786e-50
Identity = 108/233 (46.35%), Postives = 148/233 (63.52%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATV 708
            +FLQRGYDQ++HDV LQ+LPV FA+DR G+VGADGPTH GAFD++FM  +PNMV+MAPSDE E   M+ T    +D P+  R+PRG+  GA        T + IGKG +  +G ++AIL +G+ +  C++AA  L       TVAD RF KPLD +L+++LA  H++L+TVEE ++ GG GS V   L L   L  P  +  + LPD +I HG+P +   E  L    I   +
Sbjct:  394 TFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRIVPNMVIMAPSDENECRQMLYTGYCYNDGPTAVRYPRGSATGA--KQVETMTAMPIGKGLLKRQGQKIAILNFGTTLASCLVAAEAL-----DATVADMRFVKPLDVELVKELAANHDVLVTVEENAIMGGAGSGV---LELLQTLKMPKPVLLIGLPDEFIKHGAPEEITSELGLDAAGIQKQI 616          
BLAST of EY710995 vs. ExPASy Swiss-Prot
Match: DXS_SHEB5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=dxs PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.786e-50
Identity = 111/237 (46.84%), Postives = 147/237 (62.03%), Query Frame = 1
Query:   13 SFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMSCLPNMVVMAPSDEAELMHMVATAAVIDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSIVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSV-GGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESXLSLRHISATVLSLL 720
            +FLQR YDQ++HDV LQKLPV FA+DR G+VGADGPTH GAFD++FM C+PNMV+MAPSDE E   M+ T    D  PS  R+PRG   GA        T L IGKG I   G R+AIL +G++     LA+ +  ++ +  TV D RF KPLD DL++++A  HE+L+TVEE ++ GG G+ V   L     L  P  +  + LPD +I HGSP +   +  L    I A + + L
Sbjct:  394 TFLQRAYDQLIHDVALQKLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGAT--QVEAMTALPIGKGVIKRVGKRIAILNFGTL-----LASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHEVLVTVEENAIMGGAGAGVLEQLQK---LRMPKAVLQIGLPDEFIKHGSPEEVTHDLQLDAEGILAQINAYL 620          
The following BLAST results are available for this feature:
BLAST of EY710995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_MICAN5.613e-5143.801-deoxy-D-xylulose-5-phosphate synthase OS=Microcy... [more]
DXS_VIBHB7.330e-5146.861-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio ... [more]
DXS_CYAA57.330e-5144.491-deoxy-D-xylulose-5-phosphate synthase OS=Cyanoth... [more]
DXS_CHRVO7.330e-5151.851-deoxy-D-xylulose-5-phosphate synthase OS=Chromob... [more]
DXS_TRIEI9.574e-5146.151-deoxy-D-xylulose-5-phosphate synthase OS=Trichod... [more]
DXS_SHEB92.133e-5046.411-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_SHEAM2.133e-5045.611-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_RALME2.133e-5047.481-deoxy-D-xylulose-5-phosphate synthase OS=Ralston... [more]
DXS_SHEHH2.786e-5046.351-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]
DXS_SHEB52.786e-5046.841-deoxy-D-xylulose-5-phosphate synthase OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-E05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710995 ID=EY710995; Name=EY710995; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGATCATTTCTGCAAAGAGGATATGATCAGGTTGTACATGA
TGTAGACCTTCAAAAATTACCAGTCCGCTTTGCAATGGATCGAGCTGGTT
TGGTTGGTGCGGATGGACCTACTCACTGTGGAGCATTTGACGTCACATTC
ATGTCTTGCTTGCCCAACATGGTGGTCATGGCTCCATCTGATGAAGCTGA
GCTAATGCACATGGTCGCTACCGCAGCAGTTATAGATGACAGGCCCAGCT
GTTTCAGATTTCCAAGGGGCAACGGAATTGGAGCAGTTCTCCCGCCTAAT
AACAAAGGAACTCCACTTGAGATTGGGAAAGGAAGAATCCTAATGGAAGG
CGATAGAGTGGCAATTTTGGGCTATGGTTCTATAGTCCAACAATGTGTGC
TAGCTGCGAACATGCTTAAGAGCCAAGACATTTCCGTGACAGTGGCTGAT
GCAAGATTTTGCAAACCTTTGGATACAGACCTCATTAGACAGTTGGCCAA
TGAGCATGAAATCCTAATTACTGTGGAAGAGGGTTCTGTGGGAGGCTTTG
GCTCTCATGTATGTCACTTTCTAACCTTAAGTGGCATTCTGGATGGACCT
CTCAAGTTGAGATCAATGGTGCTTCCTGATAGATACATCGACCATGGATC
ACCAGCCGATCAGCTTGAAGAATCANGGCTCTCCCTCAGGCATATCTCTG
CAACAGTCTTATCTCTCTTANGGAGGCCAAAAGAAGCCCTTCTGATTTAA
GTATCATACAAATCAAACAGCATCTTGCCCTTTGGATCCACTTTACATCC
NAGNNNTGGGGTGTATACACTANCAGGTCCCACTCTAGATCTTTACCTCA
TATCCCCNTGTACATGAGCATTACGTGGGATATAAAAGTATGGT
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