EY710989

Overview
NameEY710989
Unique NameEY710989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEPW (Inner membrane protein oxaA OS=Pseudomonas putida (strain W619) GN=oxaA PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.391e-59
Identity = 115/169 (68.05%), Postives = 128/169 (75.74%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILI ALAIVSY MVLKWN DYGQAALPTQN A +  AP +PD                  ++S     PV  +KDLI VKTDVL+LAIDP GGDI QL LP YPRRQDHPD+PFQLFDNGGERVYLAQSGLTG +GPDAR+TGRP+Y+ EQK++QLADGQ QL
Sbjct:    1 MDIKRTILIAALAIVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAANNGASADVPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPDIPFQLFDNGGERVYLAQSGLTGANGPDARSTGRPLYAAEQKSFQLADGQEQL 169          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEE4 (Inner membrane protein oxaA OS=Pseudomonas entomophila (strain L48) GN=oxaA PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.091e-57
Identity = 117/171 (68.42%), Postives = 135/171 (78.95%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDT-PLGXXXXXXXXXXXXXXDTSTPVE-TPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKRTILIVALAIVSY MVLKWNQDYGQAALPTQN A + +  ++PD+ P G              + +T +   PV  +KDLI VKTDVL+LAIDP GGDI QL LP +PRRQDHP++PFQLFDNGGERVYLAQSGL GTDGPD RA+GRP+Y+TEQK+YQLADGQ+QL
Sbjct:    1 MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNTAASTANASLPDSVPAGNNGANADLPSVNAQNGTTGLAPAPVAVSKDLIQVKTDVLNLAIDPVGGDIVQLTLPKFPRRQDHPEIPFQLFDNGGERVYLAQSGLIGTDGPD-RASGRPLYATEQKSYQLADGQDQL 170          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_AZOVD (Inner membrane protein oxaA OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=oxaA PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.290e-54
Identity = 103/169 (60.95%), Postives = 126/169 (74.56%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKR+IL+VALA+VSY +VL+WNQDYGQAALP QN     ++PA+P+T  G                  P         DLI V+TDVL++AIDP+GGDI QLKLP +PRRQDHP++PFQLFDNG ER+YLAQSGLTGT+GPDARA GRP+Y +EQ++YQLADGQ+ L
Sbjct:    1 MDIKRSILLVALAVVSYLLVLQWNQDYGQAALPPQNAVAQSASPALPETVPGDSSTSADVPTAGSG-NQVPDSAASTAGSDLIQVRTDVLEVAIDPRGGDIVQLKLPKFPRRQDHPEIPFQLFDNGSERLYLAQSGLTGTNGPDARADGRPLYVSEQRSYQLADGQDSL 168          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEMY (Inner membrane protein oxaA OS=Pseudomonas mendocina (strain ymp) GN=oxaA PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.023e-47
Identity = 96/170 (56.47%), Postives = 123/170 (72.35%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKD-LIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDI+R+ILIVALA+VSY MVL+WN+DYGQAALP +  ++  + PA+PDTP                + +     P     D LI VKTDVLDLAIDP+GGDI QL+LP YPRRQD PDVPFQLFDNG ER YLAQSGL G + PD +++GR ++S+E+++Y++ADGQ+ L
Sbjct:    1 MDIQRSILIVALAVVSYLMVLQWNEDYGQAALPAEVSSSTAATPALPDTPADTASTGGDDIPTAVAEPTAAAVAPTAAASDELIRVKTDVLDLAIDPRGGDIVQLRLPQYPRRQDRPDVPFQLFDNGSERTYLAQSGLIGQNAPD-KSSGRALWSSEKQSYEMADGQDSL 169          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEAE (Inner membrane protein oxaA OS=Pseudomonas aeruginosa GN=oxaA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.337e-47
Identity = 97/169 (57.40%), Postives = 116/169 (68.64%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDI+R+ILIVALA+VSY +VL+WN+DYGQ  LP  + + N +   +PDTP                  S   + PV  +  LI VKTDVLDLAIDP+GGDI QL L  YPRR D PDVPF LFDNG ER YLAQSGLTG DGPDA + GRP++ + Q +YQLADGQN+L
Sbjct:    1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMN-TTQGLPDTPSASGTSSDVPTAQSSAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFPLFDNGRERTYLAQSGLTGADGPDASSAGRPLFRSAQSSYQLADGQNEL 168          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEAB (Inner membrane protein oxaA OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=oxaA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.337e-47
Identity = 97/169 (57.40%), Postives = 116/169 (68.64%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDI+R+ILIVALA+VSY +VL+WN+DYGQ  LP  + + N +   +PDTP                  S   + PV  +  LI VKTDVLDLAIDP+GGDI QL L  YPRR D PDVPF LFDNG ER YLAQSGLTG DGPDA + GRP++ + Q +YQLADGQN+L
Sbjct:    1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMN-TTQGLPDTPSASGTSSDVPTAQSSAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFPLFDNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQSSYQLADGQNEL 168          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEA8 (Inner membrane protein oxaA OS=Pseudomonas aeruginosa (strain LESB58) GN=oxaA PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.337e-47
Identity = 97/169 (57.40%), Postives = 116/169 (68.64%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDI+R+ILIVALA+VSY +VL+WN+DYGQ  LP  + + N +   +PDTP                  S   + PV  +  LI VKTDVLDLAIDP+GGDI QL L  YPRR D PDVPF LFDNG ER YLAQSGLTG DGPDA + GRP++ + Q +YQLADGQN+L
Sbjct:    1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMN-TTQGLPDTPSASGTSSDVPTAQSSAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFPLFDNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQSSYQLADGQNEL 168          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEA7 (Inner membrane protein oxaA OS=Pseudomonas aeruginosa (strain PA7) GN=oxaA PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.280e-47
Identity = 97/169 (57.40%), Postives = 116/169 (68.64%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDI+R+ILIVALA+VSY +VL+WN+DYGQ  LP  + + N +   +PDTP                  S   + PV  +  LI VKTDVLDLAIDP+GGDI QL L  YPRR D PDVPF LFDNG ER YLAQSGLTG DGPDA + GRP++ + Q +YQLADGQN+L
Sbjct:    1 MDIQRSILIVALAVVSYLLVLQWNKDYGQPELPAASASMN-TTQGLPDTPSAAGTSSDVPTAQSGAAGSEAADKPVAVSDKLIQVKTDVLDLAIDPRGGDIVQLGLLQYPRRLDRPDVPFPLFDNGRERTYLAQSGLTGADGPDASSAGRPLFHSAQGSYQLADGQNEL 168          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_PSEU5 (Inner membrane protein oxaA OS=Pseudomonas stutzeri (strain A1501) GN=oxaA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.251e-45
Identity = 95/169 (56.21%), Postives = 116/169 (68.64%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MDIKR+IL+VALA+V+Y MVL+WNQDYGQAALPT+   +  +APA+PD+P                            +  LI V+TDVLDLAIDP+GGDI +L LP YPRRQD PDVPFQLF+   ER Y AQSGL G DGPD +A+GRP YS+E+  YQLA+GQ+ L
Sbjct:    1 MDIKRSILLVALAVVAYLMVLQWNQDYGQAALPTETAQSQPAAPALPDSPSATTEGNANDVPAVAGQQQASALPTSAPSSQLIRVRTDVLDLAIDPRGGDIVELHLPQYPRRQDRPDVPFQLFERSSERTYEAQSGLIG-DGPD-KASGRPQYSSEKTEYQLAEGQDAL 167          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y5744_PSEPF (UPF0161 protein Pfl01_5744 OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pfl01_5744 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.811e-43
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = -2
Query:  515 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 757
            MRKLALVPI+FYRYAISPLMA+HCRFYPSCSCYA EAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE
Sbjct:    1 MRKLALVPIRFYRYAISPLMASHCRFYPSCSCYAYEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 81          
The following BLAST results are available for this feature:
BLAST of EY710989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OXAA_PSEPW3.391e-5968.05Inner membrane protein oxaA OS=Pseudomonas putida ... [more]
OXAA_PSEE41.091e-5768.42Inner membrane protein oxaA OS=Pseudomonas entomop... [more]
OXAA_AZOVD4.290e-5460.95Inner membrane protein oxaA OS=Azotobacter vinelan... [more]
OXAA_PSEMY1.023e-4756.47Inner membrane protein oxaA OS=Pseudomonas mendoci... [more]
OXAA_PSEAE1.337e-4757.40Inner membrane protein oxaA OS=Pseudomonas aerugin... [more]
OXAA_PSEAB1.337e-4757.40Inner membrane protein oxaA OS=Pseudomonas aerugin... [more]
OXAA_PSEA81.337e-4757.40Inner membrane protein oxaA OS=Pseudomonas aerugin... [more]
OXAA_PSEA72.280e-4757.40Inner membrane protein oxaA OS=Pseudomonas aerugin... [more]
OXAA_PSEU51.251e-4556.21Inner membrane protein oxaA OS=Pseudomonas stutzer... [more]
Y5744_PSEPF5.811e-4396.30UPF0161 protein Pfl01_5744 OS=Pseudomonas fluoresc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710989 ID=EY710989; Name=EY710989; organism=Citrus sinensis; type=EST; length=914bp
TTCAACTGGTTCTGGCCGTCAGCCAGTTGATAAGTCTTCTGTTCGGTCGA
ATAAACCGGACGACCGGTAGCACGAGCATCCGGACCGTCAGTACCGGTCA
GGCCACTTTGTGCCAGATATACACGTTCGCCGCCGTTATCGAACAGCTGG
AACGGAACATCCGGGTGGTCTTGGCGACGTGGATACAGCGGCAGTTTCAG
CTGGGCGATGTCACCACCCTGTGGATCGATTGCCAGGTCCAGTACATCCG
TTTTTACATGGATGAGGTCTTTATTGGTGACGACCGGGGTTTCTACCGGG
GTGCTGGTATCGGCATTCGCGCTGGGTACATCGGCACTGGCGGCAGCATT
GTTACCCAGTGGCGTATCCGGAATAGCCGGCGCCGACTGATTGGTAGCAA
CATTCTGAGTCGGCAGGGCAGCTTGGCCATAATCCTGGTTCCACTTAAGA
ACCATAGAGTAGGACACGATTGCCAGGGCGACGATCAGGATCGTGCGTTT
AATATCCATGATTACTCGGCCATCGAAGAAGAACGGGAGGTAGGGATAGG
TGGAACCGGGTCATAACCACCGGGATTCCACGGATGACAGCGACCTAAAC
GACGAAAGGTCAGCCAGCCACCGCGCAGAAGGCCATGATTTTCTATGGCT
TCCAACGCGTAGCAGGAACAACTGGGGTAGAAACGACAGTGATTTGCCAT
CAGGGGACTAATGGCATAGCGGTAAAACTGGATCGGAACGAGGGCCAGTT
TACGCATCAGTACTGTCTACCCCTACAGTTTCNGTGCTGACAGCTGGTGC
TGGCTTGTTTGTACAAGCAAACGTTTCCAGAGCTTGCCGAATCGCTGATC
AATCCGGGGTTTCTACGTCCCCCAGCCTTGCGCGCGACGAAACAATTCCC
ACCACCAGAGTGTC
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