EY710989

Overview
NameEY710989
Unique NameEY710989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y5135_PSEU2 (UPF0161 protein Psyr_5135 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=Psyr_5135 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.189e-41
Identity = 75/81 (92.59%), Postives = 78/81 (96.30%), Query Frame = -2
Query:  515 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 757
            MRKLALVPIQFYRYAISPLMA+HCRFYPSCSCYA EAIENHGLLRGGWL+ RRLGRCHPWNPGGYDPVP +PTSRSSSMAE
Sbjct:    1 MRKLALVPIQFYRYAISPLMASHCRFYPSCSCYAYEAIENHGLLRGGWLSIRRLGRCHPWNPGGYDPVPAVPTSRSSSMAE 81          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y5613_PSESM (UPF0161 protein PSPTO_5613 OS=Pseudomonas syringae pv. tomato GN=PSPTO_5613 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.104e-41
Identity = 74/81 (91.36%), Postives = 78/81 (96.30%), Query Frame = -2
Query:  515 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 757
            MRKLALVPIQFYRYAISPLMA+HCRFYPSCSCYA EAI+NHGLLRGGWL+ RRLGRCHPWNPGGYDPVP +PTSRSSSMAE
Sbjct:    1 MRKLALVPIQFYRYAISPLMASHCRFYPSCSCYAYEAIDNHGLLRGGWLSIRRLGRCHPWNPGGYDPVPAVPTSRSSSMAE 81          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y5221_PSE14 (UPF0161 protein PSPPH_5221 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_5221 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.104e-41
Identity = 74/81 (91.36%), Postives = 78/81 (96.30%), Query Frame = -2
Query:  515 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 757
            MRKLALVPIQFYRYA+SPLMA+HCRFYPSCSCYA EAIENHGLLRGGWL+ RRLGRCHPWNPGGYDPVP +PTSRSSSMAE
Sbjct:    1 MRKLALVPIQFYRYAMSPLMASHCRFYPSCSCYAYEAIENHGLLRGGWLSIRRLGRCHPWNPGGYDPVPAVPTSRSSSMAE 81          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y5557_PSEE4 (UPF0161 protein PSEEN5557 OS=Pseudomonas entomophila (strain L48) GN=PSEEN5557 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.684e-39
Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = -2
Query:  515 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 757
            MRKLALVPIQFYRYAISPLMA+HCRFYPSCSCYA EAIENHGLLRGGWL  RRLGRCHPWN GG+DPVPP P+SR+SS+AE
Sbjct:    1 MRKLALVPIQFYRYAISPLMASHCRFYPSCSCYAYEAIENHGLLRGGWLAVRRLGRCHPWNDGGFDPVPPAPSSRTSSIAE 81          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: YU161_PSEPU (UPF0161 protein in rnpA 3'region OS=Pseudomonas putida PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.935e-38
Identity = 70/81 (86.42%), Postives = 75/81 (92.59%), Query Frame = -2
Query:  515 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 757
            MRKLALVPIQFYRYAISPLMANHCRF+PSCSCYA EAIENHG+ RGGWL  RRLGRCHPWN GGYDPVPP P+SR+SS+AE
Sbjct:    1 MRKLALVPIQFYRYAISPLMANHCRFFPSCSCYAYEAIENHGIWRGGWLAVRRLGRCHPWNDGGYDPVPPAPSSRTSSIAE 81          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y5246_AZOVD (UPF0161 protein Avin_52460 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=Avin_52460 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.935e-38
Identity = 72/81 (88.89%), Postives = 74/81 (91.36%), Query Frame = -2
Query:  515 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 757
            MRKLAL  IQFYRYAISPLMANHCRF+PSCSCYA EAI  HGLLRGGWL+ RRLGRCHPWNPGGYDPVPPI TSRSSSMAE
Sbjct:    1 MRKLALAAIQFYRYAISPLMANHCRFHPSCSCYAHEAISTHGLLRGGWLSLRRLGRCHPWNPGGYDPVPPIKTSRSSSMAE 81          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y007_PSEPK (UPF0161 protein PP_0007 OS=Pseudomonas putida (strain KT2440) GN=PP_0007 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.935e-38
Identity = 70/81 (86.42%), Postives = 75/81 (92.59%), Query Frame = -2
Query:  515 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 757
            MRKLALVPIQFYRYAISPLMANHCRF+PSCSCYA EAIENHG+ RGGWL  RRLGRCHPWN GGYDPVPP P+SR+SS+AE
Sbjct:    1 MRKLALVPIQFYRYAISPLMANHCRFFPSCSCYAYEAIENHGIWRGGWLAVRRLGRCHPWNDGGYDPVPPAPSSRTSSIAE 81          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y5310_PSEP1 (UPF0161 protein Pput_5310 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=Pput_5310 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.629e-38
Identity = 69/81 (85.19%), Postives = 75/81 (92.59%), Query Frame = -2
Query:  515 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 757
            MRKLALVPIQFYRYAISPLMANHCRF+PSCSCYA EAIENHG+ RGGWL  RRLGRCHPWN GG+DPVPP P+SR+SS+AE
Sbjct:    1 MRKLALVPIQFYRYAISPLMANHCRFFPSCSCYAYEAIENHGIWRGGWLAVRRLGRCHPWNDGGFDPVPPAPSSRTSSIAE 81          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y4212_PSEU5 (UPF0161 protein PST_4212 OS=Pseudomonas stutzeri (strain A1501) GN=PST_4212 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.298e-34
Identity = 65/81 (80.25%), Postives = 71/81 (87.65%), Query Frame = -2
Query:  515 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 757
            MRKLA+  I+ Y+YAISP+MA+HCRFYPSCSCYALEAIE HGLLRGGWL+ RRLGRCHPWNPGGYDPVP   TS SS MAE
Sbjct:    1 MRKLAIASIRVYQYAISPMMASHCRFYPSCSCYALEAIETHGLLRGGWLSLRRLGRCHPWNPGGYDPVPTHNTSNSSPMAE 81          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y4992_BORBR (UPF0161 protein BB4992 OS=Bordetella bronchiseptica GN=BB4992 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.626e-24
Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = -2
Query:  548 LMRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 760
            ++R+L + PI+FYRY +SP +   CRF P+CS YA+EAIE HG  RG WL  RR+GRCHPW+PGGYDPVPP
Sbjct:    1 MIRRLLIAPIRFYRYFLSPWVGRQCRFTPTCSAYAIEAIERHGAWRGLWLAARRIGRCHPWSPGGYDPVPP 71          
The following BLAST results are available for this feature:
BLAST of EY710989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5135_PSEU23.189e-4192.59UPF0161 protein Psyr_5135 OS=Pseudomonas syringae ... [more]
Y5613_PSESM7.104e-4191.36UPF0161 protein PSPTO_5613 OS=Pseudomonas syringae... [more]
Y5221_PSE147.104e-4191.36UPF0161 protein PSPPH_5221 OS=Pseudomonas syringae... [more]
Y5557_PSEE48.684e-3987.65UPF0161 protein PSEEN5557 OS=Pseudomonas entomophi... [more]
YU161_PSEPU1.935e-3886.42UPF0161 protein in rnpA 3'region OS=Pseudomonas pu... [more]
Y5246_AZOVD1.935e-3888.89UPF0161 protein Avin_52460 OS=Azotobacter vineland... [more]
Y007_PSEPK1.935e-3886.42UPF0161 protein PP_0007 OS=Pseudomonas putida (str... [more]
Y5310_PSEP15.629e-3885.19UPF0161 protein Pput_5310 OS=Pseudomonas putida (s... [more]
Y4212_PSEU51.298e-3480.25UPF0161 protein PST_4212 OS=Pseudomonas stutzeri (... [more]
Y4992_BORBR4.626e-2463.38UPF0161 protein BB4992 OS=Bordetella bronchiseptic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710989 ID=EY710989; Name=EY710989; organism=Citrus sinensis; type=EST; length=914bp
TTCAACTGGTTCTGGCCGTCAGCCAGTTGATAAGTCTTCTGTTCGGTCGA
ATAAACCGGACGACCGGTAGCACGAGCATCCGGACCGTCAGTACCGGTCA
GGCCACTTTGTGCCAGATATACACGTTCGCCGCCGTTATCGAACAGCTGG
AACGGAACATCCGGGTGGTCTTGGCGACGTGGATACAGCGGCAGTTTCAG
CTGGGCGATGTCACCACCCTGTGGATCGATTGCCAGGTCCAGTACATCCG
TTTTTACATGGATGAGGTCTTTATTGGTGACGACCGGGGTTTCTACCGGG
GTGCTGGTATCGGCATTCGCGCTGGGTACATCGGCACTGGCGGCAGCATT
GTTACCCAGTGGCGTATCCGGAATAGCCGGCGCCGACTGATTGGTAGCAA
CATTCTGAGTCGGCAGGGCAGCTTGGCCATAATCCTGGTTCCACTTAAGA
ACCATAGAGTAGGACACGATTGCCAGGGCGACGATCAGGATCGTGCGTTT
AATATCCATGATTACTCGGCCATCGAAGAAGAACGGGAGGTAGGGATAGG
TGGAACCGGGTCATAACCACCGGGATTCCACGGATGACAGCGACCTAAAC
GACGAAAGGTCAGCCAGCCACCGCGCAGAAGGCCATGATTTTCTATGGCT
TCCAACGCGTAGCAGGAACAACTGGGGTAGAAACGACAGTGATTTGCCAT
CAGGGGACTAATGGCATAGCGGTAAAACTGGATCGGAACGAGGGCCAGTT
TACGCATCAGTACTGTCTACCCCTACAGTTTCNGTGCTGACAGCTGGTGC
TGGCTTGTTTGTACAAGCAAACGTTTCCAGAGCTTGCCGAATCGCTGATC
AATCCGGGGTTTCTACGTCCCCCAGCCTTGCGCGCGACGAAACAATTCCC
ACCACCAGAGTGTC
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