EY710989

Overview
NameEY710989
Unique NameEY710989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y494_BORPE (UPF0161 protein BP0494 OS=Bordetella pertussis GN=BP0494 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.626e-24
Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = -2
Query:  548 LMRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 760
            ++R+L + PI+FYRY +SP +   CRF P+CS YA+EAIE HG  RG WL  RR+GRCHPW+PGGYDPVPP
Sbjct:    1 MIRRLLIAPIRFYRYFLSPWVGRQCRFTPTCSAYAIEAIERHGAWRGLWLAARRIGRCHPWSPGGYDPVPP 71          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y4404_BORPA (UPF0161 protein BPP4404 OS=Bordetella parapertussis GN=BPP4404 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.626e-24
Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = -2
Query:  548 LMRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 760
            ++R+L + PI+FYRY +SP +   CRF P+CS YA+EAIE HG  RG WL  RR+GRCHPW+PGGYDPVPP
Sbjct:    1 MIRRLLIAPIRFYRYFLSPWVGRQCRFTPTCSAYAIEAIERHGAWRGLWLAARRIGRCHPWSPGGYDPVPP 71          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_MARMS (Inner membrane protein oxaA OS=Marinomonas sp. (strain MWYL1) GN=oxaA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.346e-23
Identity = 65/169 (38.46%), Postives = 90/169 (53.25%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MD +R  L  AL I  Y + L+W+QDYG  +  TQ+VA +  + +  ++ +                      T +   K LI V TD L +AI+P GGD+ +  L  Y +    PD PF + ++G ER Y+ QSGL G DGPDA   GRPVY +E+  Y LADG+N L
Sbjct:    1 MDFRRYFLWGALFISGYLLFLQWSQDYGPQS--TQSVAQSTQSQSETNSQMSDDLPMATQSTTEANAEIPQSVTKIAPGK-LIEVTTDTLRVAINPVGGDLVEAALLQYKKELGQPD-PFVILEDGSERTYVTQSGLVGQDGPDASPEGRPVYQSEKTAYTLADGENSL 165          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y3896_MARAV (UPF0161 protein Maqu_3896 OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=Maqu_3896 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.758e-23
Identity = 47/69 (68.12%), Postives = 59/69 (85.51%), Query Frame = -2
Query:  551 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVP 757
            MR+L L+PI+FY+YAISP+MA+HCR YP+CS YA+EAI++HG L+GG+L   RL RCHPW  GGYDPVP
Sbjct:    1 MRQLLLLPIRFYQYAISPMMASHCRHYPTCSQYAVEAIQHHGPLKGGYLATARLLRCHPWAEGGYDPVP 69          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ALCBS (Inner membrane protein oxaA OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=oxaA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.724e-23
Identity = 61/177 (34.46%), Postives = 94/177 (53.11%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPT-------QNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVT-NKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            M+I+R ++I  +A+VSY M+  W +DY   A P        Q  +++  +  +P                    + +P +    T +   I V TDVL + I+P GGDI +L LP YP+  D PD PF L D      Y+AQSGL G +G D+ + GRP +++ Q++Y+LA+G N+L
Sbjct:    1 MEIQRALVITGIAVVSYLMIQAWQRDYANTASPVPVEQVAEQGNSSSSDSADLPSVQSQTDNSIPSAQSDNDLPSVSPADIAQPTPSSQRIEVNTDVLRVEINPVGGDIVRLALPDYPKHVDTPDQPFVLMDQNSNGTYVAQSGLVGKNGTDS-SKGRPHWNSAQQSYRLAEGDNEL 176          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y1918_DESVV (UPF0161 protein Dvul_1918 OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=Dvul_1918 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.944e-22
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = -2
Query:  515 TVLMRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 766
            +V++R+L ++P++FY+Y ISPL    CR+ P+CS Y  EA+  HG++RG WL  RR+ RCHPW  GG+DPVPP+P  R  S  E
Sbjct:    2 SVMLRRLVVLPVRFYQYCISPLFPPACRYVPTCSAYTAEAVMRHGVMRGLWLAARRILRCHPWCAGGHDPVPPVPPQRYPSAQE 85          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y1076_DESVH (UPF0161 protein DVU_1076 OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=DVU_1076 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.944e-22
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = -2
Query:  515 TVLMRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSSMAE 766
            +V++R+L ++P++FY+Y ISPL    CR+ P+CS Y  EA+  HG++RG WL  RR+ RCHPW  GG+DPVPP+P  R  S  E
Sbjct:    2 SVMLRRLVVLPVRFYQYCISPLFPPACRYVPTCSAYTAEAVMRHGVMRGLWLAARRILRCHPWCAGGHDPVPPVPPQRYPSAQE 85          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y3415_BORA1 (UPF0161 protein BAV3415 OS=Bordetella avium (strain 197N) GN=BAV3415 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.315e-22
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = -2
Query:  551 LMRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVP 760
            +++ L + PI+FYR+ +SP +   CRF PSCS YA+EAIE HG LRG WL  RR+GRCHPW+PGG DPVP
Sbjct:    1 MIKTLLIAPIRFYRFFLSPWIGRQCRFTPSCSAYAIEAIERHGALRGLWLASRRIGRCHPWSPGGLDPVP 70          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y3990_AZOSB (UPF0161 protein azo3990 OS=Azoarcus sp. (strain BH72) GN=azo3990 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.385e-22
Identity = 41/69 (59.42%), Postives = 57/69 (82.61%), Query Frame = -2
Query:  551 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVP 757
            M+ + +V ++FYRYAISP++  +CRF+PSCS YA+EA++ HG +RG WL  RR+ RCHP++PGGYDPVP
Sbjct:    1 MKTVLIVLLRFYRYAISPMLGRNCRFHPSCSEYAIEAVQRHGAVRGAWLAARRVARCHPFHPGGYDPVP 69          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y1594_AZOSE (UPF0161 protein AZOSEA15940 OS=Azoarcus sp. (strain EbN1) GN=AZOSEA15940 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.260e-21
Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = -2
Query:  551 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVP 757
            M+ L L  ++ YRYAISP++  +CRF+P CS YA EA+E HG +RGGWL  +R+GRCHP++PGGYDPVP
Sbjct:    1 MKALVLGLLRVYRYAISPMLGRNCRFHPCCSEYAQEAVERHGAMRGGWLALKRVGRCHPFHPGGYDPVP 69          
The following BLAST results are available for this feature:
BLAST of EY710989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y494_BORPE4.626e-2463.38UPF0161 protein BP0494 OS=Bordetella pertussis GN=... [more]
Y4404_BORPA4.626e-2463.38UPF0161 protein BPP4404 OS=Bordetella parapertussi... [more]
OXAA_MARMS1.346e-2338.46Inner membrane protein oxaA OS=Marinomonas sp. (st... [more]
Y3896_MARAV1.758e-2368.12UPF0161 protein Maqu_3896 OS=Marinobacter aquaeole... [more]
OXAA_ALCBS8.724e-2334.46Inner membrane protein oxaA OS=Alcanivorax borkume... [more]
Y1918_DESVV1.944e-2251.19UPF0161 protein Dvul_1918 OS=Desulfovibrio vulgari... [more]
Y1076_DESVH1.944e-2251.19UPF0161 protein DVU_1076 OS=Desulfovibrio vulgaris... [more]
Y3415_BORA13.315e-2261.43UPF0161 protein BAV3415 OS=Bordetella avium (strai... [more]
Y3990_AZOSB7.385e-2259.42UPF0161 protein azo3990 OS=Azoarcus sp. (strain BH... [more]
Y1594_AZOSE1.260e-2160.87UPF0161 protein AZOSEA15940 OS=Azoarcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710989 ID=EY710989; Name=EY710989; organism=Citrus sinensis; type=EST; length=914bp
TTCAACTGGTTCTGGCCGTCAGCCAGTTGATAAGTCTTCTGTTCGGTCGA
ATAAACCGGACGACCGGTAGCACGAGCATCCGGACCGTCAGTACCGGTCA
GGCCACTTTGTGCCAGATATACACGTTCGCCGCCGTTATCGAACAGCTGG
AACGGAACATCCGGGTGGTCTTGGCGACGTGGATACAGCGGCAGTTTCAG
CTGGGCGATGTCACCACCCTGTGGATCGATTGCCAGGTCCAGTACATCCG
TTTTTACATGGATGAGGTCTTTATTGGTGACGACCGGGGTTTCTACCGGG
GTGCTGGTATCGGCATTCGCGCTGGGTACATCGGCACTGGCGGCAGCATT
GTTACCCAGTGGCGTATCCGGAATAGCCGGCGCCGACTGATTGGTAGCAA
CATTCTGAGTCGGCAGGGCAGCTTGGCCATAATCCTGGTTCCACTTAAGA
ACCATAGAGTAGGACACGATTGCCAGGGCGACGATCAGGATCGTGCGTTT
AATATCCATGATTACTCGGCCATCGAAGAAGAACGGGAGGTAGGGATAGG
TGGAACCGGGTCATAACCACCGGGATTCCACGGATGACAGCGACCTAAAC
GACGAAAGGTCAGCCAGCCACCGCGCAGAAGGCCATGATTTTCTATGGCT
TCCAACGCGTAGCAGGAACAACTGGGGTAGAAACGACAGTGATTTGCCAT
CAGGGGACTAATGGCATAGCGGTAAAACTGGATCGGAACGAGGGCCAGTT
TACGCATCAGTACTGTCTACCCCTACAGTTTCNGTGCTGACAGCTGGTGC
TGGCTTGTTTGTACAAGCAAACGTTTCCAGAGCTTGCCGAATCGCTGATC
AATCCGGGGTTTCTACGTCCCCCAGCCTTGCGCGCGACGAAACAATTCCC
ACCACCAGAGTGTC
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