EY710989

Overview
NameEY710989
Unique NameEY710989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y007_SHESA (UPF0161 protein Shewana3_0007 OS=Shewanella sp. (strain ANA-3) GN=Shewana3_0007 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.544e-14
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = -2
Query:  548 LALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 748
            LA   I+ Y+  ISPL+   CRF P+CS YA+EAI+ HG  +G W   +R+ +CHP +PGG DPVPP
Sbjct:   11 LATTFIRGYQIFISPLLGPRCRFNPTCSHYAIEAIKVHGTAKGCWFALKRILKCHPLHPGGSDPVPP 77          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_THISH (Inner membrane protein oxaA OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=oxaA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.544e-14
Identity = 57/183 (31.15%), Postives = 84/183 (45.90%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPT----QNVATNQSAPA----IPDTPLGXXXXXXXXXXXXXXDTSTPVET-PVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGR-----PVYSTEQKTYQLADGQNQL 509
            MD  R +L +++ +V + +   WN+DYG   +      + V      PA    +PD P+                   P E  P   ++  I V TDVLD+ ID +GGD+ +  LP YP     PD P +L D    R Y+AQSGL     P     GR      ++  E+  ++LADGQ++L
Sbjct:    1 MDNLRPVLYLSMLLVLFLIWQAWNRDYGPQPVAAPGAQEQVMDRDGVPAPPQDVPDAPVSEA-------------VDAPTEVAPAEPDRRRIRVVTDVLDIEIDTRGGDLVRADLPTYPVSLRTPDQPIRLLDE-RFRQYVAQSGLIHDRVPGVSGEGRAPSHHAIFQAERDEFRLADGQDEL 169          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y564_THEEB (UPF0161 protein tsr0564 OS=Thermosynechococcus elongatus (strain BP-1) GN=tsr0564 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = -2
Query:  527 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVP---PIPTSRSS 757
            + K  +V I+ Y+  ISPL    CR+ PSCS YA+EAI  +G ++G +L  RR+ RCHP+  GGYDPVP   P P + SS
Sbjct:    5 LSKALIVLIRIYQRWISPLFLPTCRYTPSCSAYAVEAIARYGAVKGTYLAIRRILRCHPFAVGGYDPVPTTCPDPCNESS 84          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y4697_TRIEI (UPF0161 protein Tery_4697 OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_4697 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = -2
Query:  548 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 757
            M+ L +  I+ Y+  ISP++   CRF P+CS YA+EAIE  G+ +G  +   R+ RCHP++PGGYDPVPP
Sbjct:    1 MKVLLVRLIKGYKIFISPILPPSCRFQPTCSEYAMEAIERFGIFKGTAMAVMRILRCHPFHPGGYDPVPP 70          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y4522_SHEB9 (UPF0161 protein Sbal195_4522 OS=Shewanella baltica (strain OS195) GN=Sbal195_4522 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = -2
Query:  548 LALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 748
            LA   I+ Y+  ISP++   CRF P+CS YA+EAI+ HG  +G W   +R+ +CHP +PGG DPVPP
Sbjct:   11 LATTLIRGYQVFISPILGPRCRFNPTCSHYAIEAIKVHGTAKGCWFALKRILKCHPLHPGGSDPVPP 77          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y4381_SHEB5 (UPF0161 protein Sbal_4381 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=Sbal_4381 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = -2
Query:  548 LALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 748
            LA   I+ Y+  ISP++   CRF P+CS YA+EAI+ HG  +G W   +R+ +CHP +PGG DPVPP
Sbjct:   11 LATTLIRGYQVFISPILGPRCRFNPTCSHYAIEAIKVHGTAKGCWFALKRILKCHPLHPGGSDPVPP 77          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y4380_SHEB8 (UPF0161 protein Shew185_4380 OS=Shewanella baltica (strain OS185) GN=Shew185_4380 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = -2
Query:  548 LALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 748
            LA   I+ Y+  ISP++   CRF P+CS YA+EAI+ HG  +G W   +R+ +CHP +PGG DPVPP
Sbjct:   11 LATTLIRGYQVFISPILGPRCRFNPTCSHYAIEAIKVHGTAKGCWFALKRILKCHPLHPGGSDPVPP 77          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y4326_SHEB2 (UPF0161 protein Sbal223_4326 OS=Shewanella baltica (strain OS223) GN=Sbal223_4326 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = -2
Query:  548 LALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 748
            LA   I+ Y+  ISP++   CRF P+CS YA+EAI+ HG  +G W   +R+ +CHP +PGG DPVPP
Sbjct:   11 LATTLIRGYQVFISPILGPRCRFNPTCSHYAIEAIKVHGTAKGCWFALKRILKCHPLHPGGSDPVPP 77          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y4258_SHEPA (UPF0161 protein Spea_4258 OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=Spea_4258 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = -2
Query:  551 LALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVP 748
            LA   I+ Y+  ISP+M   CRF P+CS YA+EAI  HG+++G W   +R+ RCHP +PGG DPVP
Sbjct:   11 LATTIIRGYQLLISPMMGPRCRFNPTCSHYAIEAIRLHGVVKGCWFAGKRILRCHPLHPGGEDPVP 76          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y4093_SHESW (UPF0161 protein Sputw3181_4093 OS=Shewanella sp. (strain W3-18-1) GN=Sputw3181_4093 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.323e-14
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = -2
Query:  548 LALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 748
            LA   I+ Y+  ISP++   CRF P+CS YA+EAI+ HG  +G W   +R+ +CHP +PGG DPVPP
Sbjct:   11 LATTLIRGYQIFISPILGPRCRFNPTCSHYAIEAIKVHGTAKGCWFALKRILKCHPLHPGGSDPVPP 77          
The following BLAST results are available for this feature:
BLAST of EY710989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y007_SHESA2.544e-1452.24UPF0161 protein Shewana3_0007 OS=Shewanella sp. (s... [more]
OXAA_THISH2.544e-1431.15Inner membrane protein oxaA OS=Thioalkalivibrio sp... [more]
Y564_THEEB3.323e-1448.75UPF0161 protein tsr0564 OS=Thermosynechococcus elo... [more]
Y4697_TRIEI3.323e-1450.00UPF0161 protein Tery_4697 OS=Trichodesmium erythra... [more]
Y4522_SHEB93.323e-1450.75UPF0161 protein Sbal195_4522 OS=Shewanella baltica... [more]
Y4381_SHEB53.323e-1450.75UPF0161 protein Sbal_4381 OS=Shewanella baltica (s... [more]
Y4380_SHEB83.323e-1450.75UPF0161 protein Shew185_4380 OS=Shewanella baltica... [more]
Y4326_SHEB23.323e-1450.75UPF0161 protein Sbal223_4326 OS=Shewanella baltica... [more]
Y4258_SHEPA3.323e-1453.03UPF0161 protein Spea_4258 OS=Shewanella pealeana (... [more]
Y4093_SHESW3.323e-1450.75UPF0161 protein Sputw3181_4093 OS=Shewanella sp. (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710989 ID=EY710989; Name=EY710989; organism=Citrus sinensis; type=EST; length=914bp
TTCAACTGGTTCTGGCCGTCAGCCAGTTGATAAGTCTTCTGTTCGGTCGA
ATAAACCGGACGACCGGTAGCACGAGCATCCGGACCGTCAGTACCGGTCA
GGCCACTTTGTGCCAGATATACACGTTCGCCGCCGTTATCGAACAGCTGG
AACGGAACATCCGGGTGGTCTTGGCGACGTGGATACAGCGGCAGTTTCAG
CTGGGCGATGTCACCACCCTGTGGATCGATTGCCAGGTCCAGTACATCCG
TTTTTACATGGATGAGGTCTTTATTGGTGACGACCGGGGTTTCTACCGGG
GTGCTGGTATCGGCATTCGCGCTGGGTACATCGGCACTGGCGGCAGCATT
GTTACCCAGTGGCGTATCCGGAATAGCCGGCGCCGACTGATTGGTAGCAA
CATTCTGAGTCGGCAGGGCAGCTTGGCCATAATCCTGGTTCCACTTAAGA
ACCATAGAGTAGGACACGATTGCCAGGGCGACGATCAGGATCGTGCGTTT
AATATCCATGATTACTCGGCCATCGAAGAAGAACGGGAGGTAGGGATAGG
TGGAACCGGGTCATAACCACCGGGATTCCACGGATGACAGCGACCTAAAC
GACGAAAGGTCAGCCAGCCACCGCGCAGAAGGCCATGATTTTCTATGGCT
TCCAACGCGTAGCAGGAACAACTGGGGTAGAAACGACAGTGATTTGCCAT
CAGGGGACTAATGGCATAGCGGTAAAACTGGATCGGAACGAGGGCCAGTT
TACGCATCAGTACTGTCTACCCCTACAGTTTCNGTGCTGACAGCTGGTGC
TGGCTTGTTTGTACAAGCAAACGTTTCCAGAGCTTGCCGAATCGCTGATC
AATCCGGGGTTTCTACGTCCCCCAGCCTTGCGCGCGACGAAACAATTCCC
ACCACCAGAGTGTC
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