EY710989

Overview
NameEY710989
Unique NameEY710989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y495_CAUCN (UPF0161 protein CCNA_00495 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=CCNA_00495 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.184e-13
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = -2
Query:  548 IQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 733
            ++ Y+  +SPL+   CRF PSCS Y   A+++HG L+G WL  RR+ RC+P+   GYDP PP
Sbjct:   12 LRAYKLTLSPLIGRQCRFTPSCSEYTAAALKDHGPLKGSWLGLRRICRCNPFGGSGYDPPPP 73          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y463_CAUCR (UPF0161 protein CC_0463 OS=Caulobacter crescentus GN=CC_0463 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.184e-13
Identity = 30/62 (48.39%), Postives = 42/62 (67.74%), Query Frame = -2
Query:  548 IQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 733
            ++ Y+  +SPL+   CRF PSCS Y   A+++HG L+G WL  RR+ RC+P+   GYDP PP
Sbjct:   12 LRAYKLTLSPLIGRQCRFTPSCSEYTAAALKDHGPLKGSWLGLRRICRCNPFGGSGYDPPPP 73          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y3489_CLOCE (UPF0161 protein Ccel_3489 OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=Ccel_3489 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.184e-13
Identity = 29/70 (41.43%), Postives = 52/70 (74.29%), Query Frame = -2
Query:  554 LMRKLALVPIQFYRYAISPLMANH-CRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPV 760
            +++++ +  I+FY+  ISP+     CRFYP+CS YA+EA+  +G ++G +L  +R+ +CHP++PGG+DP+
Sbjct:    1 MLKRILISIIRFYQRFISPIKVRPTCRFYPTCSQYAIEAVTKYGCVKGTFLALKRILKCHPFHPGGFDPI 70          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y3467_GEOSL (UPF0161 protein GSU3467 OS=Geobacter sulfurreducens GN=GSU3467 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.184e-13
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = -2
Query:  554 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPV 757
            M K  L  I  Y+  +SPL    CRFYPSCS YA E++  +GL++G WLT  R+ +CHP++PGG DPV
Sbjct:    1 MLKGILYIIGIYQRYLSPLKGPTCRFYPSCSRYAHESLTRYGLVKGLWLTTIRILKCHPFHPGGVDPV 68          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y1710_STRMU (UPF0161 protein SMU_1710c OS=Streptococcus mutans GN=SMU_1710c PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.184e-13
Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = -2
Query:  551 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVP 757
            M+K+ + PI+FY+  ISP+    CR+ P+CS Y +EAIE HG L+G  +   R+ RCHP+  GG DPVP
Sbjct:    1 MKKVLIAPIKFYQKFISPIFPASCRYRPTCSAYMIEAIEKHG-LKGFLMGIARILRCHPFVEGGEDPVP 68          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y1314_PEDPA (UPF0161 protein PEPE_1314 OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=PEPE_1314 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.184e-13
Identity = 32/69 (46.38%), Postives = 49/69 (71.01%), Query Frame = -2
Query:  551 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVP 757
            M+++ L+ I+ Y+  ISP+    CR+YP+CS Y+L+AI+  G ++GG +   R+ RCHP+  GGYDPVP
Sbjct:    1 MKQILLLIIRGYQKFISPMFPPSCRYYPTCSNYSLQAIKRFGAIKGGLMGVARILRCHPFVRGGYDPVP 69          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_HAES2 (Inner membrane protein oxaA OS=Haemophilus somnus (strain 2336) GN=oxaA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.184e-13
Identity = 50/169 (29.59%), Postives = 77/169 (45.56%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATGRPVYSTEQKTYQLADGQNQL 509
            MD KR++L +AL  +S+ +  +W  DY     P   V        +  T L                 ++ +         +I ++ DV  L ++  GGD+   +L  Y     H   PF L  N  ++VY+AQSGL G +G D+RA GR  Y  E   ++LA+GQ +L
Sbjct:    1 MDSKRSLLFMALLFISFLIYQQWQVDYNT---PKPEVTEQAQVSEVNSTAL---------------TATSDIANDTQAKGRVITLENDVFRLKVNTLGGDVIGSELLNYDAEL-HSSAPFVLLQNNADKVYIAQSGLVGKNGIDSRA-GRANYQVEGDVFKLAEGQQEL 149          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y2527_LEIXX (UPF0161 protein Lxx25275 OS=Leifsonia xyli subsp. xyli GN=Lxx25275 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.069e-12
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = -2
Query:  551 YRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVP 724
            YR   SP   + CR+YPSCS Y L+A++ HG++ GG+L   R+ RCHPW  GG D VP
Sbjct:    5 YRAVFSPFYGDVCRYYPSCSAYTLQAVQEHGVIFGGYLGVCRILRCHPWAAGGVDDVP 62          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y2343_RHOP5 (UPF0161 protein RPE_2343 OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_2343 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.069e-12
Identity = 35/73 (47.95%), Postives = 41/73 (56.16%), Query Frame = -2
Query:  542 LMRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIP 760
            L R+     I  YR+ +SPL+  HCR  P+CS Y  EAI   GL  GGW+T  RL RC PW   G D VP  P
Sbjct:   17 LPRQAGRGAIWLYRHTLSPLVGYHCRHLPTCSVYGDEAIGRFGLWAGGWMTLARLLRCQPWGTSGIDNVPAEP 89          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y135_BAUCH (UPF0161 protein BCI_0135 OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=BCI_0135 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.069e-12
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = -2
Query:  551 KLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVP 751
            KL    I+ Y+  ISPL+  HCRF P+CS Y++ AI   G+ +G WLT  R+ RC+PW+ GG D VP
Sbjct:   10 KLLSYVIRCYQLIISPLIKPHCRFLPTCSQYSITAIHRFGIFKGIWLTLIRILRCNPWSQGGEDQVP 76          
The following BLAST results are available for this feature:
BLAST of EY710989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y495_CAUCN8.184e-1348.39UPF0161 protein CCNA_00495 OS=Caulobacter crescent... [more]
Y463_CAUCR8.184e-1348.39UPF0161 protein CC_0463 OS=Caulobacter crescentus ... [more]
Y3489_CLOCE8.184e-1341.43UPF0161 protein Ccel_3489 OS=Clostridium celluloly... [more]
Y3467_GEOSL8.184e-1351.47UPF0161 protein GSU3467 OS=Geobacter sulfurreducen... [more]
Y1710_STRMU8.184e-1349.28UPF0161 protein SMU_1710c OS=Streptococcus mutans ... [more]
Y1314_PEDPA8.184e-1346.38UPF0161 protein PEPE_1314 OS=Pediococcus pentosace... [more]
OXAA_HAES28.184e-1329.59Inner membrane protein oxaA OS=Haemophilus somnus ... [more]
Y2527_LEIXX1.069e-1251.72UPF0161 protein Lxx25275 OS=Leifsonia xyli subsp. ... [more]
Y2343_RHOP51.069e-1247.95UPF0161 protein RPE_2343 OS=Rhodopseudomonas palus... [more]
Y135_BAUCH1.069e-1249.25UPF0161 protein BCI_0135 OS=Baumannia cicadellinic... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710989 ID=EY710989; Name=EY710989; organism=Citrus sinensis; type=EST; length=914bp
TTCAACTGGTTCTGGCCGTCAGCCAGTTGATAAGTCTTCTGTTCGGTCGA
ATAAACCGGACGACCGGTAGCACGAGCATCCGGACCGTCAGTACCGGTCA
GGCCACTTTGTGCCAGATATACACGTTCGCCGCCGTTATCGAACAGCTGG
AACGGAACATCCGGGTGGTCTTGGCGACGTGGATACAGCGGCAGTTTCAG
CTGGGCGATGTCACCACCCTGTGGATCGATTGCCAGGTCCAGTACATCCG
TTTTTACATGGATGAGGTCTTTATTGGTGACGACCGGGGTTTCTACCGGG
GTGCTGGTATCGGCATTCGCGCTGGGTACATCGGCACTGGCGGCAGCATT
GTTACCCAGTGGCGTATCCGGAATAGCCGGCGCCGACTGATTGGTAGCAA
CATTCTGAGTCGGCAGGGCAGCTTGGCCATAATCCTGGTTCCACTTAAGA
ACCATAGAGTAGGACACGATTGCCAGGGCGACGATCAGGATCGTGCGTTT
AATATCCATGATTACTCGGCCATCGAAGAAGAACGGGAGGTAGGGATAGG
TGGAACCGGGTCATAACCACCGGGATTCCACGGATGACAGCGACCTAAAC
GACGAAAGGTCAGCCAGCCACCGCGCAGAAGGCCATGATTTTCTATGGCT
TCCAACGCGTAGCAGGAACAACTGGGGTAGAAACGACAGTGATTTGCCAT
CAGGGGACTAATGGCATAGCGGTAAAACTGGATCGGAACGAGGGCCAGTT
TACGCATCAGTACTGTCTACCCCTACAGTTTCNGTGCTGACAGCTGGTGC
TGGCTTGTTTGTACAAGCAAACGTTTCCAGAGCTTGCCGAATCGCTGATC
AATCCGGGGTTTCTACGTCCCCCAGCCTTGCGCGCGACGAAACAATTCCC
ACCACCAGAGTGTC
back to top