EY710989 | Citrus Genome Database

Overview


Name	EY710989
Unique Name	EY710989
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	914

Libraries


Library Name	Type
Sweet orange fruit, development stadium (3 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ESCF3 (Inner membrane protein oxaA OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOUT (Inner membrane protein oxaA OS=Escherichia coli (strain UTI89 / UPEC) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOSM (Inner membrane protein oxaA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOSE (Inner membrane protein oxaA OS=Escherichia coli (strain SE11) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOLU (Inner membrane protein oxaA OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOLI (Inner membrane protein oxaA OS=Escherichia coli (strain K12) GN=oxaA PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOLC (Inner membrane protein oxaA OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOL6 (Inner membrane protein oxaA OS=Escherichia coli O6 GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOL5 (Inner membrane protein oxaA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOK1 (Inner membrane protein oxaA OS=Escherichia coli O1:K1 / APEC GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

The following BLAST results are available for this feature:

BLAST of EY710989 vs. ExPASy Swiss-Prot

BLAST of EY710989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
OXAA_ESCF3	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia ferguso...	[more]
OXAA_ECOUT	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli (s...	[more]
OXAA_ECOSM	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli (s...	[more]
OXAA_ECOSE	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli (s...	[more]
OXAA_ECOLU	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O1...	[more]
OXAA_ECOLI	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli (s...	[more]
OXAA_ECOLC	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli (s...	[more]
OXAA_ECOL6	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O6...	[more]
OXAA_ECOL5	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O6...	[more]
OXAA_ECOK1	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O1...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-702-002-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY710989 ID=EY710989; Name=EY710989; organism=Citrus sinensis; type=EST; length=914bp
TTCAACTGGTTCTGGCCGTCAGCCAGTTGATAAGTCTTCTGTTCGGTCGA
ATAAACCGGACGACCGGTAGCACGAGCATCCGGACCGTCAGTACCGGTCA
GGCCACTTTGTGCCAGATATACACGTTCGCCGCCGTTATCGAACAGCTGG
AACGGAACATCCGGGTGGTCTTGGCGACGTGGATACAGCGGCAGTTTCAG
CTGGGCGATGTCACCACCCTGTGGATCGATTGCCAGGTCCAGTACATCCG
TTTTTACATGGATGAGGTCTTTATTGGTGACGACCGGGGTTTCTACCGGG
GTGCTGGTATCGGCATTCGCGCTGGGTACATCGGCACTGGCGGCAGCATT
GTTACCCAGTGGCGTATCCGGAATAGCCGGCGCCGACTGATTGGTAGCAA
CATTCTGAGTCGGCAGGGCAGCTTGGCCATAATCCTGGTTCCACTTAAGA
ACCATAGAGTAGGACACGATTGCCAGGGCGACGATCAGGATCGTGCGTTT
AATATCCATGATTACTCGGCCATCGAAGAAGAACGGGAGGTAGGGATAGG
TGGAACCGGGTCATAACCACCGGGATTCCACGGATGACAGCGACCTAAAC
GACGAAAGGTCAGCCAGCCACCGCGCAGAAGGCCATGATTTTCTATGGCT
TCCAACGCGTAGCAGGAACAACTGGGGTAGAAACGACAGTGATTTGCCAT
CAGGGGACTAATGGCATAGCGGTAAAACTGGATCGGAACGAGGGCCAGTT
TACGCATCAGTACTGTCTACCCCTACAGTTTCNGTGCTGACAGCTGGTGC
TGGCTTGTTTGTACAAGCAAACGTTTCCAGAGCTTGCCGAATCGCTGATC
AATCCGGGGTTTCTACGTCCCCCAGCCTTGCGCGCGACGAAACAATTCCC
ACCACCAGAGTGTC