EY710989 | Citrus Genome Database

Overview


Name	EY710989
Unique Name	EY710989
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	914

Libraries


Library Name	Type
Sweet orange fruit, development stadium (3 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOHS (Inner membrane protein oxaA OS=Escherichia coli O9:H4 (strain HS) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECODH (Inner membrane protein oxaA OS=Escherichia coli (strain K12 / DH10B) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECOBW (Inner membrane protein oxaA OS=Escherichia coli (strain K12 / BW2952) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECO8A (Inner membrane protein oxaA OS=Escherichia coli O8 (strain IAI1) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECO81 (Inner membrane protein oxaA OS=Escherichia coli O81 (strain ED1a) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECO7I (Inner membrane protein oxaA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECO5E (Inner membrane protein oxaA OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECO57 (Inner membrane protein oxaA OS=Escherichia coli O157:H7 GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECO55 (Inner membrane protein oxaA OS=Escherichia coli (strain 55989 / EAEC) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

[Close]

BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECO45 (Inner membrane protein oxaA OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1

Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147

The following BLAST results are available for this feature:

BLAST of EY710989 vs. ExPASy Swiss-Prot

BLAST of EY710989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
OXAA_ECOHS	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O9...	[more]
OXAA_ECODH	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli (s...	[more]
OXAA_ECOBW	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli (s...	[more]
OXAA_ECO8A	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O8...	[more]
OXAA_ECO81	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O8...	[more]
OXAA_ECO7I	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O7...	[more]
OXAA_ECO5E	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O1...	[more]
OXAA_ECO57	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O1...	[more]
OXAA_ECO55	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli (s...	[more]
OXAA_ECO45	2.149e-21	37.06	Inner membrane protein oxaA OS=Escherichia coli O4...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-702-002-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY710989 ID=EY710989; Name=EY710989; organism=Citrus sinensis; type=EST; length=914bp
TTCAACTGGTTCTGGCCGTCAGCCAGTTGATAAGTCTTCTGTTCGGTCGA
ATAAACCGGACGACCGGTAGCACGAGCATCCGGACCGTCAGTACCGGTCA
GGCCACTTTGTGCCAGATATACACGTTCGCCGCCGTTATCGAACAGCTGG
AACGGAACATCCGGGTGGTCTTGGCGACGTGGATACAGCGGCAGTTTCAG
CTGGGCGATGTCACCACCCTGTGGATCGATTGCCAGGTCCAGTACATCCG
TTTTTACATGGATGAGGTCTTTATTGGTGACGACCGGGGTTTCTACCGGG
GTGCTGGTATCGGCATTCGCGCTGGGTACATCGGCACTGGCGGCAGCATT
GTTACCCAGTGGCGTATCCGGAATAGCCGGCGCCGACTGATTGGTAGCAA
CATTCTGAGTCGGCAGGGCAGCTTGGCCATAATCCTGGTTCCACTTAAGA
ACCATAGAGTAGGACACGATTGCCAGGGCGACGATCAGGATCGTGCGTTT
AATATCCATGATTACTCGGCCATCGAAGAAGAACGGGAGGTAGGGATAGG
TGGAACCGGGTCATAACCACCGGGATTCCACGGATGACAGCGACCTAAAC
GACGAAAGGTCAGCCAGCCACCGCGCAGAAGGCCATGATTTTCTATGGCT
TCCAACGCGTAGCAGGAACAACTGGGGTAGAAACGACAGTGATTTGCCAT
CAGGGGACTAATGGCATAGCGGTAAAACTGGATCGGAACGAGGGCCAGTT
TACGCATCAGTACTGTCTACCCCTACAGTTTCNGTGCTGACAGCTGGTGC
TGGCTTGTTTGTACAAGCAAACGTTTCCAGAGCTTGCCGAATCGCTGATC
AATCCGGGGTTTCTACGTCCCCCAGCCTTGCGCGCGACGAAACAATTCCC
ACCACCAGAGTGTC