EY710989

Overview
NameEY710989
Unique NameEY710989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_ECO27 (Inner membrane protein oxaA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=oxaA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.149e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  Y LA+GQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG----------------------SAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALAR (Inner membrane protein oxaA OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=oxaA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.787e-21
Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      LI VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKLITVKTDVLDLTINTRGGDVEQALLPAYPKELGSSE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y2437_NITOC (UPF0161 protein Noc_2437 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=Noc_2437 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.252e-21
Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = -2
Query:  524 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPTSRSSS 757
            M+ + L  I FYRYA+SP M NHCR+YPSCS Y  EAI+ +G  RGGWL  RRL RCHP+ PGG D VP I   RS S
Sbjct:    1 MKNILLSLIIFYRYALSPFMGNHCRYYPSCSVYTQEAIQRYGGFRGGWLGLRRLLRCHPFCPGGIDQVPEIAKWRSKS 78          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALTY (Inner membrane protein oxaA OS=Salmonella typhimurium GN=oxaA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.252e-21
Identity = 62/170 (36.47%), Postives = 86/170 (50.59%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E++ + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALSV (Inner membrane protein oxaA OS=Salmonella schwarzengrund (strain CVM19633) GN=oxaA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.252e-21
Identity = 62/170 (36.47%), Postives = 86/170 (50.59%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E++ + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALHS (Inner membrane protein oxaA OS=Salmonella heidelberg (strain SL476) GN=oxaA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.252e-21
Identity = 62/170 (36.47%), Postives = 86/170 (50.59%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E++ + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALDC (Inner membrane protein oxaA OS=Salmonella dublin (strain CT_02021853) GN=oxaA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.252e-21
Identity = 62/170 (36.47%), Postives = 86/170 (50.59%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E++ + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKEAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALTI (Inner membrane protein oxaA OS=Salmonella typhi GN=oxaA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.165e-21
Identity = 62/170 (36.47%), Postives = 86/170 (50.59%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q + T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTMQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALPK (Inner membrane protein oxaA OS=Salmonella paratyphi A (strain AKU_12601) GN=oxaA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/170 (36.47%), Postives = 85/170 (50.00%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALPC (Inner membrane protein oxaA OS=Salmonella paratyphi C (strain RKS4594) GN=oxaA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/170 (36.47%), Postives = 85/170 (50.00%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNEL 147          
The following BLAST results are available for this feature:
BLAST of EY710989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OXAA_ECO272.149e-2137.06Inner membrane protein oxaA OS=Escherichia coli O1... [more]
OXAA_SALAR4.787e-2137.06Inner membrane protein oxaA OS=Salmonella arizonae... [more]
Y2437_NITOC6.252e-2160.26UPF0161 protein Noc_2437 OS=Nitrosococcus oceani (... [more]
OXAA_SALTY6.252e-2136.47Inner membrane protein oxaA OS=Salmonella typhimur... [more]
OXAA_SALSV6.252e-2136.47Inner membrane protein oxaA OS=Salmonella schwarze... [more]
OXAA_SALHS6.252e-2136.47Inner membrane protein oxaA OS=Salmonella heidelbe... [more]
OXAA_SALDC6.252e-2136.47Inner membrane protein oxaA OS=Salmonella dublin (... [more]
OXAA_SALTI8.165e-2136.47Inner membrane protein oxaA OS=Salmonella typhi GN... [more]
OXAA_SALPK1.066e-2036.47Inner membrane protein oxaA OS=Salmonella paratyph... [more]
OXAA_SALPC1.066e-2036.47Inner membrane protein oxaA OS=Salmonella paratyph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710989 ID=EY710989; Name=EY710989; organism=Citrus sinensis; type=EST; length=914bp
TTCAACTGGTTCTGGCCGTCAGCCAGTTGATAAGTCTTCTGTTCGGTCGA
ATAAACCGGACGACCGGTAGCACGAGCATCCGGACCGTCAGTACCGGTCA
GGCCACTTTGTGCCAGATATACACGTTCGCCGCCGTTATCGAACAGCTGG
AACGGAACATCCGGGTGGTCTTGGCGACGTGGATACAGCGGCAGTTTCAG
CTGGGCGATGTCACCACCCTGTGGATCGATTGCCAGGTCCAGTACATCCG
TTTTTACATGGATGAGGTCTTTATTGGTGACGACCGGGGTTTCTACCGGG
GTGCTGGTATCGGCATTCGCGCTGGGTACATCGGCACTGGCGGCAGCATT
GTTACCCAGTGGCGTATCCGGAATAGCCGGCGCCGACTGATTGGTAGCAA
CATTCTGAGTCGGCAGGGCAGCTTGGCCATAATCCTGGTTCCACTTAAGA
ACCATAGAGTAGGACACGATTGCCAGGGCGACGATCAGGATCGTGCGTTT
AATATCCATGATTACTCGGCCATCGAAGAAGAACGGGAGGTAGGGATAGG
TGGAACCGGGTCATAACCACCGGGATTCCACGGATGACAGCGACCTAAAC
GACGAAAGGTCAGCCAGCCACCGCGCAGAAGGCCATGATTTTCTATGGCT
TCCAACGCGTAGCAGGAACAACTGGGGTAGAAACGACAGTGATTTGCCAT
CAGGGGACTAATGGCATAGCGGTAAAACTGGATCGGAACGAGGGCCAGTT
TACGCATCAGTACTGTCTACCCCTACAGTTTCNGTGCTGACAGCTGGTGC
TGGCTTGTTTGTACAAGCAAACGTTTCCAGAGCTTGCCGAATCGCTGATC
AATCCGGGGTTTCTACGTCCCCCAGCCTTGCGCGCGACGAAACAATTCCC
ACCACCAGAGTGTC
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