EY710989

Overview
NameEY710989
Unique NameEY710989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALPB (Inner membrane protein oxaA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=oxaA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/170 (36.47%), Postives = 85/170 (50.00%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALPA (Inner membrane protein oxaA OS=Salmonella paratyphi A GN=oxaA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/170 (36.47%), Postives = 85/170 (50.00%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALG2 (Inner membrane protein oxaA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=oxaA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/170 (36.47%), Postives = 85/170 (50.00%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALEP (Inner membrane protein oxaA OS=Salmonella enteritidis PT4 (strain P125109) GN=oxaA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/170 (36.47%), Postives = 85/170 (50.00%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALA4 (Inner membrane protein oxaA OS=Salmonella agona (strain SL483) GN=oxaA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.066e-20
Identity = 62/170 (36.47%), Postives = 85/170 (50.00%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALCH (Inner membrane protein oxaA OS=Salmonella choleraesuis GN=oxaA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.393e-20
Identity = 62/170 (36.47%), Postives = 84/170 (49.41%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+  GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG DGPD  A G RP+Y+ E+  + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTHGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAFVLADGQNEL 147          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y2472_SYNP6 (UPF0161 protein syc2472_c OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc2472_c PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.819e-20
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = -2
Query:  539 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPT 757
            M+ L L  IQFYR  ISPL    CRFYP+CS Y LEAI+  G L+G WLT  R+ RCHP++PGGYDPVPP+P+
Sbjct:    1 MKLLLLALIQFYRRWISPLTPASCRFYPTCSQYGLEAIDRFGPLKGSWLTLCRILRCHPFHPGGYDPVPPLPS 73          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y1968_DESDA (UPF0161 protein Ddes_1968 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=Ddes_1968 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.819e-20
Identity = 39/71 (54.93%), Postives = 52/71 (73.24%), Query Frame = -2
Query:  548 LMRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPP 760
            ++R + + PI+ Y+  ISP++   CR+YP+CS YA EA+  HG+LRGGWL  +RL RCHPW   GYDPVPP
Sbjct:    4 MLRVICVFPIRVYQRCISPVLPPACRYYPTCSAYAAEAVMTHGVLRGGWLALKRLARCHPWGGSGYDPVPP 74          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: Y1486_SYNE7 (UPF0161 protein Synpcc7942_1486 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_1486 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.819e-20
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = -2
Query:  539 MRKLALVPIQFYRYAISPLMANHCRFYPSCSCYALEAIENHGLLRGGWLTFRRLGRCHPWNPGGYDPVPPIPT 757
            M+ L L  IQFYR  ISPL    CRFYP+CS Y LEAI+  G L+G WLT  R+ RCHP++PGGYDPVPP+P+
Sbjct:    1 MKLLLLALIQFYRRWISPLTPASCRFYPTCSQYGLEAIDRFGPLKGSWLTLCRILRCHPFHPGGYDPVPPLPS 73          
BLAST of EY710989 vs. ExPASy Swiss-Prot
Match: OXAA_SALNS (Inner membrane protein oxaA OS=Salmonella newport (strain SL254) GN=oxaA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.052e-20
Identity = 61/170 (35.88%), Postives = 85/170 (50.00%), Query Frame = -1
Query:    3 MDIKRTILIVALAIVSYSMVLKWNQDYGQAALPTQNVATNQSAPAIPDTPLGXXXXXXXXXXXXXXDTSTPVETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPFQLFDNGGERVYLAQSGLTGTDGPDARATG-RPVYSTEQKTYQLADGQNQL 509
            MD +R +L++AL  VS+ +   W QD        Q   T  +A                        ++     P      +I VKTDVLDL I+ +GGD+ Q  LP YP+     + PFQL +   + +Y AQSGLTG  GPD  A G RP+Y+ E++ + LADGQN+L
Sbjct:    1 MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQTQQTTQTTTTAAG----------------------SAADQGVPASGQGKMITVKTDVLDLTINTRGGDVEQALLPAYPKELGSNE-PFQLLETTPQFIYQAQSGLTGRGGPDNPANGPRPLYNVEKEAFVLADGQNEL 147          
The following BLAST results are available for this feature:
BLAST of EY710989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OXAA_SALPB1.066e-2036.47Inner membrane protein oxaA OS=Salmonella paratyph... [more]
OXAA_SALPA1.066e-2036.47Inner membrane protein oxaA OS=Salmonella paratyph... [more]
OXAA_SALG21.066e-2036.47Inner membrane protein oxaA OS=Salmonella gallinar... [more]
OXAA_SALEP1.066e-2036.47Inner membrane protein oxaA OS=Salmonella enteriti... [more]
OXAA_SALA41.066e-2036.47Inner membrane protein oxaA OS=Salmonella agona (s... [more]
OXAA_SALCH1.393e-2036.47Inner membrane protein oxaA OS=Salmonella cholerae... [more]
Y2472_SYNP61.819e-2061.64UPF0161 protein syc2472_c OS=Synechococcus sp. (st... [more]
Y1968_DESDA1.819e-2054.93UPF0161 protein Ddes_1968 OS=Desulfovibrio desulfu... [more]
Y1486_SYNE71.819e-2061.64UPF0161 protein Synpcc7942_1486 OS=Synechococcus e... [more]
OXAA_SALNS4.052e-2035.88Inner membrane protein oxaA OS=Salmonella newport ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-D10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710989 ID=EY710989; Name=EY710989; organism=Citrus sinensis; type=EST; length=914bp
TTCAACTGGTTCTGGCCGTCAGCCAGTTGATAAGTCTTCTGTTCGGTCGA
ATAAACCGGACGACCGGTAGCACGAGCATCCGGACCGTCAGTACCGGTCA
GGCCACTTTGTGCCAGATATACACGTTCGCCGCCGTTATCGAACAGCTGG
AACGGAACATCCGGGTGGTCTTGGCGACGTGGATACAGCGGCAGTTTCAG
CTGGGCGATGTCACCACCCTGTGGATCGATTGCCAGGTCCAGTACATCCG
TTTTTACATGGATGAGGTCTTTATTGGTGACGACCGGGGTTTCTACCGGG
GTGCTGGTATCGGCATTCGCGCTGGGTACATCGGCACTGGCGGCAGCATT
GTTACCCAGTGGCGTATCCGGAATAGCCGGCGCCGACTGATTGGTAGCAA
CATTCTGAGTCGGCAGGGCAGCTTGGCCATAATCCTGGTTCCACTTAAGA
ACCATAGAGTAGGACACGATTGCCAGGGCGACGATCAGGATCGTGCGTTT
AATATCCATGATTACTCGGCCATCGAAGAAGAACGGGAGGTAGGGATAGG
TGGAACCGGGTCATAACCACCGGGATTCCACGGATGACAGCGACCTAAAC
GACGAAAGGTCAGCCAGCCACCGCGCAGAAGGCCATGATTTTCTATGGCT
TCCAACGCGTAGCAGGAACAACTGGGGTAGAAACGACAGTGATTTGCCAT
CAGGGGACTAATGGCATAGCGGTAAAACTGGATCGGAACGAGGGCCAGTT
TACGCATCAGTACTGTCTACCCCTACAGTTTCNGTGCTGACAGCTGGTGC
TGGCTTGTTTGTACAAGCAAACGTTTCCAGAGCTTGCCGAATCGCTGATC
AATCCGGGGTTTCTACGTCCCCCAGCCTTGCGCGCGACGAAACAATTCCC
ACCACCAGAGTGTC
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