EY710982
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.139e-25 Identity = 68/190 (35.79%), Postives = 100/190 (52.63%), Query Frame = 3 Query: 3 YCTLPAFCLLT-----NKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--------ASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVA---GVSW----AINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNR 512 YC PA L+ N P F + L +++ A +LE RWSG+ + +WWRNEQFW++ TSA+L AV Q LKV G + +F +TSK + D +AELY +WT+L+ P L VN+ + A G W A ++ + L + F +WV+ HLYPF GL+GR+++ Sbjct: 618 YCLFPAIPLIAGGGGWNAAPTPTYVAFLAA----LMVTLAAVAVLETRWSGIALGEWWRNEQFWMVSATSAYLAAVAQVALKVATGKEISFKLTSKHLASSATPVAGKDRQYAELYAVRWTALMAPTAAALAVNVASMAAAGGGGRWWWWDAPSAAAAAAAAL--PVAFNVWVVVHLYPFALGLMGRRSK 801
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.683e-24 Identity = 60/196 (30.61%), Postives = 108/196 (55.10%), Query Frame = 3 Query: 3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK-ASDDDGD-FAELYVFKWTSLLIPPTTVLIVNL--VGIVAG--VSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLW 572 Y P L++ ++ I + ++ + + I G+ E++WSG+ + DW RNEQF++IG T + AV LK+ G +F +TSK + GD FA+LY +W LLIP VL VN+ VG+ G +W + + + L + F +W++A LYPF G++G++ + P ++ V +++ + ++++ Sbjct: 675 YNLFPVMWLISEQYYIQQPFGEYLLYLVAIIAMIHVIGMFEVKWSGITVLDWCRNEQFYMIGSTGVYPTAVLYMALKLFTGKGIHFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVVLAVNVGAVGVAVGKAAAWGLLTEQGRFAVL--GMVFNVWILALLYPFALGIMGQRGKRPAVLFVATVMAVAAVAIMY 868
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.966e-23 Identity = 63/214 (29.44%), Postives = 102/214 (47.66%), Query Frame = 3 Query: 3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKV--LAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGY--QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTXSHFNXQCG 632 Y P + F I + ++ +++ G++EI+W+G+ + DW RNEQF++IG T+ + AV +LK L G+ T AS FAELY +W LL P V+ VN+ I A + A+ G+ G L F +W++ +YPF G++GR ++ P I+ V ++ I +L + + S HF G Sbjct: 664 YLLFPVIWIFRGIFYIQKPFPTYVLYLVIVIFMSEMIGMVEIKWAGLTLLDWIRNEQFYIIGATAVYPLAVLHIVLKCFGLKGVSFKLTAKQVASSTSEKFAELYDVQWAPLLFPTIVVIAVNICAIGAAIGKALFGGWSLMQMGDASLGLVFNVWILLLIYPFALGIMGRWSKRPYILFVLIVISFVIIALADIAIQAMRSGSVRLHFRRSGG 877
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.609e-23 Identity = 57/200 (28.50%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGK-------LFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWV 575 Y P L++ ++ I ++ + + I G+ E++W+G+ + DW RNEQF++IG T + AV LK++ G F +TSK A+ FA+LY +W LLIP +++VN+ + V A +WGPL + F +W++ LYPF G++G+ + P ++ V + + + ++V Sbjct: 636 YNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTAASSGDKFADLYTVRWVPLLIPTIVIMVVNVAAVGVAVGKA-----AAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYV 830
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.127e-22 Identity = 58/200 (29.00%), Postives = 102/200 (51.00%), Query Frame = 3 Query: 3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK-ASDDDGD-FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGK-------LFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWV 575 Y P L++ ++ I ++ + + I G+ E++W+G+ + DW RNEQF++IG T + AV LK++ G F +TSK + GD FA+LY +W LLIP +++VN+ + V A +WGPL + F +W++ LYPF G++G+ + P ++ V + + + ++V Sbjct: 666 YNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVIIVVNVAAVGVAVGKA-----AAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYV 860
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.284e-22 Identity = 64/198 (32.32%), Postives = 108/198 (54.55%), Query Frame = 3 Query: 3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNL--VGIVAG---VSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWV 575 Y P L+ ++ I ++ +++ + I G LEI+W+G+ D+WRNEQF++IG TSA+ AV ++ +L +F VTSK +D + FA+LY +W +LIP VL+ N+ +G+ G V + + Q + G L F +WV+ LYPF ++GR + P I++V ++ I +L++V Sbjct: 660 YAISPVMWLIPDEVYIQRPFTRYVVYLLMIILMIHMIGWLEIKWAGITWLDYWRNEQFFMIGSTSAYPTAVLHMVVNLLTKKGIHFRVTSKQTTADTNDKFADLYEMRWVPMLIPTMVVLVANIGAIGVAIGKMAVYMGVWTIAQKRHAIMG-LLFNMWVMFLLYPFALAIMGRWAKRPIILVVLLPIIFVIVALVYV 856
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.736e-21 Identity = 59/153 (38.56%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 78 WFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGI-DTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGY---QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTP 518 + + + I G++EI+W+G+ + DWWRNEQF++IG T +L AV +LK L G+ F +T+K A FAELY W+ LL P V+ VN+ I A A+ G+ Q G G L F +WV+ LYPF G++GR ++ P Sbjct: 678 YLVAVIAMIEVIGLVEIKWAGLTLLDWWRNEQFYMIGATGVYLAAVLHIVLKRLLGLKGVRFKLTAKQLAGGARERFAELYDVHWSPLLAPTVVVMAVNVTAIGAAAGKAVVGGWTPAQVAGASAG-LVFNVWVLVLLYPFALGIMGRWSKRP 829
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.079e-21 Identity = 63/202 (31.19%), Postives = 107/202 (52.97%), Query Frame = 3 Query: 3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNL--VGIVAGVS------WAI-NSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWV 575 Y P L+ ++ I ++ +++ + I G LEI+W+G+ D+WRNEQF++IG TSA+ AV ++ +L +F VTSK +D + FA+LY +W +LIP VL+ N+ +G+ G + W I + + G L F +WV+ LYPF ++GR + I++V ++ I +L++V Sbjct: 660 YAISPVMWLIPDEVYIQRPFTRYVVYLLVIILMIHMIGWLEIKWAGITWLDYWRNEQFFMIGSTSAYPTAVLHMVVNLLTKKGIHFRVTSKQTTADTNDKFADLYEMRWVPMLIPTMVVLVANIGAIGVAIGKTAVYMGVWTIAQKRHAAMG-----LLFNMWVMFLLYPFALAIMGRWAKRSIILVVLLPIIFVIVALVYV 856
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.783e-13 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFA--ELYVFKW---TSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGP-LFGKLFFAIWVIAHLYPFLKGLLGR 503 Y LP LL + P+ S+ +I+LF+ + +L+ G WW +++ W I G S+HLF + LK L F VTSKA+DD+ E +F++ +S+ +P TTV IVNL+ V G+ G +WG L +L A + + + P + ++ R Sbjct: 554 YGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDFVLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPSSSMFLPLTTVAIVNLLAFVWGL-----YGLFAWGEGLVLELMLASFAVVNCLPIYEAMVLR 721
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.804e-12 Identity = 58/201 (28.86%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK---ASDDDGDFAEL----YVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQS--WGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSI-LLASIFSLLWV 575 Y L +CLLTN+ + + S + LF++ +E G+ + WW N + I SA L A F LLK + +T F VT K SD +G E+ + F + + IP T + ++N+V I G A+ + GP + W++ L PF++GL+G+ + I WS+ L AS+ L++ Sbjct: 590 YELLVPYCLLTNQSFLSKASENCFNITLALFLTYNTYNFVEYMECGLSVRAWWNNHRMQRIISASAWLLAFFTVLLKTIGLSETVFEVTRKEKSTSDGNGQNDEVDPERFTFDASPVFIPVTALTMLNIVAITIGTWRAVFGTTEDVPGGPGISEFMSCGWLLLCLLPFVRGLVGK----GSYGIPWSVKLKASLLVALFL 786 The following BLAST results are available for this feature:
BLAST of EY710982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710982 ID=EY710982; Name=EY710982; organism=Citrus sinensis; type=EST; length=910bpback to top |