EY710982

Overview
NameEY710982
Unique NameEY710982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.139e-25
Identity = 68/190 (35.79%), Postives = 100/190 (52.63%), Query Frame = 3
Query:    3 YCTLPAFCLLT-----NKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--------ASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVA---GVSW----AINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNR 512
            YC  PA  L+      N    P    F +     L +++ A  +LE RWSG+ + +WWRNEQFW++  TSA+L AV Q  LKV  G + +F +TSK         +  D  +AELY  +WT+L+ P    L VN+  + A   G  W    A ++   +   L   + F +WV+ HLYPF  GL+GR+++
Sbjct:  618 YCLFPAIPLIAGGGGWNAAPTPTYVAFLAA----LMVTLAAVAVLETRWSGIALGEWWRNEQFWMVSATSAYLAAVAQVALKVATGKEISFKLTSKHLASSATPVAGKDRQYAELYAVRWTALMAPTAAALAVNVASMAAAGGGGRWWWWDAPSAAAAAAAAL--PVAFNVWVVVHLYPFALGLMGRRSK 801          
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.683e-24
Identity = 60/196 (30.61%), Postives = 108/196 (55.10%), Query Frame = 3
Query:    3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK-ASDDDGD-FAELYVFKWTSLLIPPTTVLIVNL--VGIVAG--VSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLW 572
            Y   P   L++ ++ I +      ++ + +   I   G+ E++WSG+ + DW RNEQF++IG T  +  AV    LK+  G   +F +TSK  +   GD FA+LY  +W  LLIP   VL VN+  VG+  G   +W + +    +  L   + F +W++A LYPF  G++G++ + P ++ V +++  +  ++++
Sbjct:  675 YNLFPVMWLISEQYYIQQPFGEYLLYLVAIIAMIHVIGMFEVKWSGITVLDWCRNEQFYMIGSTGVYPTAVLYMALKLFTGKGIHFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVVLAVNVGAVGVAVGKAAAWGLLTEQGRFAVL--GMVFNVWILALLYPFALGIMGQRGKRPAVLFVATVMAVAAVAIMY 868          
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.966e-23
Identity = 63/214 (29.44%), Postives = 102/214 (47.66%), Query Frame = 3
Query:    3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKV--LAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGY--QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTXSHFNXQCG 632
            Y   P   +    F I +      ++ +++       G++EI+W+G+ + DW RNEQF++IG T+ +  AV   +LK   L G+    T    AS     FAELY  +W  LL P   V+ VN+  I A +  A+  G+     G     L F +W++  +YPF  G++GR ++ P I+ V  ++   I +L  + +    S     HF    G
Sbjct:  664 YLLFPVIWIFRGIFYIQKPFPTYVLYLVIVIFMSEMIGMVEIKWAGLTLLDWIRNEQFYIIGATAVYPLAVLHIVLKCFGLKGVSFKLTAKQVASSTSEKFAELYDVQWAPLLFPTIVVIAVNICAIGAAIGKALFGGWSLMQMGDASLGLVFNVWILLLIYPFALGIMGRWSKRPYILFVLIVISFVIIALADIAIQAMRSGSVRLHFRRSGG 877          
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.609e-23
Identity = 57/200 (28.50%), Postives = 101/200 (50.50%), Query Frame = 3
Query:    3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGK-------LFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWV 575
            Y   P   L++ ++ I        ++ + +   I   G+ E++W+G+ + DW RNEQF++IG T  +  AV    LK++ G    F +TSK  A+     FA+LY  +W  LLIP   +++VN+  +   V  A      +WGPL          + F +W++  LYPF  G++G+  + P ++ V   +  +  + ++V
Sbjct:  636 YNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTAASSGDKFADLYTVRWVPLLIPTIVIMVVNVAAVGVAVGKA-----AAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYV 830          
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.127e-22
Identity = 58/200 (29.00%), Postives = 102/200 (51.00%), Query Frame = 3
Query:    3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK-ASDDDGD-FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGK-------LFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWV 575
            Y   P   L++ ++ I        ++ + +   I   G+ E++W+G+ + DW RNEQF++IG T  +  AV    LK++ G    F +TSK  +   GD FA+LY  +W  LLIP   +++VN+  +   V  A      +WGPL          + F +W++  LYPF  G++G+  + P ++ V   +  +  + ++V
Sbjct:  666 YNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVIIVVNVAAVGVAVGKA-----AAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYV 860          
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.284e-22
Identity = 64/198 (32.32%), Postives = 108/198 (54.55%), Query Frame = 3
Query:    3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNL--VGIVAG---VSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWV 575
            Y   P   L+ ++  I        ++ +++ + I   G LEI+W+G+   D+WRNEQF++IG TSA+  AV   ++ +L     +F VTSK   +D +  FA+LY  +W  +LIP   VL+ N+  +G+  G   V   + +  Q    + G L F +WV+  LYPF   ++GR  + P I++V   ++  I +L++V
Sbjct:  660 YAISPVMWLIPDEVYIQRPFTRYVVYLLMIILMIHMIGWLEIKWAGITWLDYWRNEQFFMIGSTSAYPTAVLHMVVNLLTKKGIHFRVTSKQTTADTNDKFADLYEMRWVPMLIPTMVVLVANIGAIGVAIGKMAVYMGVWTIAQKRHAIMG-LLFNMWVMFLLYPFALAIMGRWAKRPIILVVLLPIIFVIVALVYV 856          
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.736e-21
Identity = 59/153 (38.56%), Postives = 86/153 (56.21%), Query Frame = 3
Query:   78 WFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGI-DTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGY---QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTP 518
            + + +   I   G++EI+W+G+ + DWWRNEQF++IG T  +L AV   +LK L G+    F +T+K  A      FAELY   W+ LL P   V+ VN+  I A    A+  G+   Q  G   G L F +WV+  LYPF  G++GR ++ P
Sbjct:  678 YLVAVIAMIEVIGLVEIKWAGLTLLDWWRNEQFYMIGATGVYLAAVLHIVLKRLLGLKGVRFKLTAKQLAGGARERFAELYDVHWSPLLAPTVVVMAVNVTAIGAAAGKAVVGGWTPAQVAGASAG-LVFNVWVLVLLYPFALGIMGRWSKRP 829          
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.079e-21
Identity = 63/202 (31.19%), Postives = 107/202 (52.97%), Query Frame = 3
Query:    3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNL--VGIVAGVS------WAI-NSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWV 575
            Y   P   L+ ++  I        ++ +++ + I   G LEI+W+G+   D+WRNEQF++IG TSA+  AV   ++ +L     +F VTSK   +D +  FA+LY  +W  +LIP   VL+ N+  +G+  G +      W I    + + G     L F +WV+  LYPF   ++GR  +   I++V   ++  I +L++V
Sbjct:  660 YAISPVMWLIPDEVYIQRPFTRYVVYLLVIILMIHMIGWLEIKWAGITWLDYWRNEQFFMIGSTSAYPTAVLHMVVNLLTKKGIHFRVTSKQTTADTNDKFADLYEMRWVPMLIPTMVVLVANIGAIGVAIGKTAVYMGVWTIAQKRHAAMG-----LLFNMWVMFLLYPFALAIMGRWAKRSIILVVLLPIIFVIVALVYV 856          
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.783e-13
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 3
Query:    3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFA--ELYVFKW---TSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGP-LFGKLFFAIWVIAHLYPFLKGLLGR 503
            Y  LP   LL    + P+ S+     +I+LF+  +   +L+    G     WW +++ W I G S+HLF   +  LK L      F VTSKA+DD+      E  +F++   +S+ +P TTV IVNL+  V G+      G  +WG  L  +L  A + + +  P  + ++ R
Sbjct:  554 YGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDFVLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPSSSMFLPLTTVAIVNLLAFVWGL-----YGLFAWGEGLVLELMLASFAVVNCLPIYEAMVLR 721          
BLAST of EY710982 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.804e-12
Identity = 58/201 (28.86%), Postives = 94/201 (46.77%), Query Frame = 3
Query:    3 YCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK---ASDDDGDFAEL----YVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQS--WGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSI-LLASIFSLLWV 575
            Y  L  +CLLTN+  + + S       + LF++      +E    G+ +  WW N +   I   SA L A F  LLK +   +T F VT K    SD +G   E+    + F  + + IP T + ++N+V I  G   A+    +    GP   +     W++  L PF++GL+G+     +  I WS+ L AS+   L++
Sbjct:  590 YELLVPYCLLTNQSFLSKASENCFNITLALFLTYNTYNFVEYMECGLSVRAWWNNHRMQRIISASAWLLAFFTVLLKTIGLSETVFEVTRKEKSTSDGNGQNDEVDPERFTFDASPVFIPVTALTMLNIVAITIGTWRAVFGTTEDVPGGPGISEFMSCGWLLLCLLPFVRGLVGK----GSYGIPWSVKLKASLLVALFL 786          
The following BLAST results are available for this feature:
BLAST of EY710982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CSLF7_ORYSJ4.139e-2535.79Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]
CSLF4_ORYSJ2.683e-2430.61Mixed-linked glucan synthase 4 OS=Oryza sativa sub... [more]
CSLF8_ORYSJ2.966e-2329.44Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]
CSLF1_ORYSJ6.609e-2328.50Putative mixed-linked glucan synthase 1 OS=Oryza s... [more]
CSLF2_ORYSJ1.127e-2229.00Mixed-linked glucan synthase 2 OS=Oryza sativa sub... [more]
CSLF3_ORYSI4.284e-2232.32Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLF9_ORYSJ4.736e-2138.56Probable mixed-linked glucan synthase 9 OS=Oryza s... [more]
CSLF3_ORYSJ8.079e-2131.19Probable mixed-linked glucan synthase 3 OS=Oryza s... [more]
CSLG3_ARATH2.783e-1330.64Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]
CSLH3_ORYSJ1.804e-1228.86Putative cellulose synthase-like protein H3 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-D02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710982 ID=EY710982; Name=EY710982; organism=Citrus sinensis; type=EST; length=910bp
CTTACTGCACGCTTCCTGCTTTTTGCCTTCTTACTAATAAATTCATCATT
CCAGAGATAAGCAACTTTGCTAGCATGTGGTTTATTCTACTTTTCATTTC
CATTTTTGCTACTGGAATACTGGAGATTAGATGGAGTGGGGTTGGTATTG
AGGACTGGTGGAGGAATGAACAGTTCTGGGTCATTGGTGGAACATCGGCA
CATCTATTTGCTGTTTTCCAAGGTCTCTTGAAAGTGCTTGCTGGGATTGA
TACCAACTTTACTGTCACTTCAAAGGCTTCTGATGATGATGGAGATTTTG
CAGAGCTTTATGTATTCAAATGGACATCTCTTCTCATCCCTCCAACTACA
GTCCTGATTGTGAACTTGGTGGGTATTGTAGCTGGTGTATCATGGGCCAT
AAACAGTGGTTACCAATCATGGGGTCCACTCTTTGGCAAGCTATTCTTTG
CCATATGGGTCATTGCCCATCTGTATCCTTTCCTGAAGGGTCTGTTGGGT
CGTCAAAACCGCACACCAACAATTGTCATTGTGTGGTCTATCCTACTTGC
TTCCATTTTCTCCTTGCTGTGGGTGCGTGTTGATCCCTTTACCTCTGATG
ACACCNNAAGCCATTTCAACNGTCAATGTGGCATTCATTGCTAGTGCATG
TNGNATGATTATTTGTGGCTTCAAATGCCATTCTTCCTTTCAGCTCTCAT
CAGTGTATATAAGAAGAAATTATGTCATTGGGAAATGATCGTAAGTTATT
TACTTNCTCGTCGGCTGGAGAAAGAGTTTGATGATATGGATCTTTTCTTT
GTCCCGGAGCTACCTAGGAGACTTGAGGCTTTANAAACCCCTTTTGATCC
TATTAAAATTATTCTTATATCGTTTGTAACTCACTACGNATGCTGATGTT
GNCCCTACCT
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