EY710955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710955 vs. ExPASy Swiss-Prot
Match: COPB_DROME (Coatomer subunit beta OS=Drosophila melanogaster GN=betaCop PE=1 SV=2) HSP 1 Score: 250.751 bits (639), Expect = 8.386e-66 Identity = 128/194 (65.98%), Postives = 148/194 (76.29%), Query Frame = 3 Query: 12 QNLCSELATMGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGFLAANLYAKSVFGEDALVNVSIEK---QTDGKLSGYIRIRSKTQGIALSLGDKITLKQK 584 QN ELAT+GDLKLVERP LAP IKAN+KVSSTE G+IFGNIVYET+ L VVVLN IHIDIMDYI PA CTD FR MW +FEWENKV VNT D E+L H++KSTNMKCLT AL G CGF+AAN+YAKS+FGE+AL N+SIEK D K++G+IRIR+K+QG+ALSLGDKI+ QK Sbjct: 767 QNCTLELATLGDLKLVERPHPVVLAPHDFCNIKANVKVSSTENGIIFGNIVYETA--LNTNVVVLNTIHIDIMDYIIPASCTDTEFRQMWQDFEWENKVTVNTSFTDLHEYLKHLLKSTNMKCLTPEKALSGQCGFMAANMYAKSIFGENALANLSIEKPVDDPDSKVTGHIRIRAKSQGMALSLGDKISSSQK 958
BLAST of EY710955 vs. ExPASy Swiss-Prot
Match: COPB_SCHPO (Coatomer subunit beta OS=Schizosaccharomyces pombe GN=sec26 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 6.234e-53 Identity = 106/187 (56.68%), Postives = 137/187 (73.26%), Query Frame = 3 Query: 3 TRPQNLCSELATMGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAAFRTMWAEFEWENKVAVNTVIQ-DEKEFLDHIIKSTNMKCLTAPSALDGDCGFLAANLYAKSVFGEDALVNVSIEKQTDGKLSGYIRIRSKTQGIALSLG 560 T QNL +LAT+GDLK+VERP L P + K ++A +KVSSTE+ VIFGNIVY E +VVLN I ++I+DYI PA ++ FR+MW EFEWENKV +++ +FL I+K TNM CLT ++L GDCGFL+ANLYA S+FGEDAL+++S+EK G +SG++RIRSKTQGIALSLG Sbjct: 751 TTLQNLSVDLATLGDLKVVERPPPMNLGPHAFKSVQATVKVSSTESAVIFGNIVYGGKASDEDKIVVLNGIPVNIIDYIKPAFIPESQFRSMWTEFEWENKVDISSNEDISLYDFLHKIMKKTNMNCLTPDASLRGDCGFLSANLYACSIFGEDALMSLSVEKSVSGPISGHVRIRSKTQGIALSLG 937
BLAST of EY710955 vs. ExPASy Swiss-Prot
Match: COPB_DICDI (Coatomer subunit beta OS=Dictyostelium discoideum GN=copb PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 1.300e-50 Identity = 104/192 (54.17%), Postives = 133/192 (69.27%), Query Frame = 3 Query: 12 QNLCSELATMGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYE----TSNVLERTVVVLNDIHIDIMDYISPA--VCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSALDGDCGFLAANLYAKSVFGEDALVNVSIEKQTDGKLSGYIRIRSKTQGIALSLGDKI 569 QN+ EL T+GDLK+ ER +T+AP KA+IKVSST+ GVI G I ++ S++ ++ V+LN++HID++DYI PA TD FR W EFEWENK+ VNT I D +++ HI K TNM LT L D G L+ANL AKSVFGEDAL N+ IEKQ DGK+SGYIRIR+K Q IA++LG+KI Sbjct: 714 QNVTLELVTLGDLKICERVPPFTMAPREKTSAKASIKVSSTDNGVIMGTIAFDIAGSVSSMSDKNCVILNELHIDVIDYILPANHQYTDVLFRNHWLEFEWENKIPVNTNITDLVKYVHHISKVTNMGILTPEVHLSNDTGILSANLCAKSVFGEDALANICIEKQADGKISGYIRIRAKVQSIAVTLGEKI 905
BLAST of EY710955 vs. ExPASy Swiss-Prot
Match: COPB_YEAST (Coatomer subunit beta OS=Saccharomyces cerevisiae GN=SEC26 PE=1 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 6.038e-48 Identity = 95/193 (49.22%), Postives = 130/193 (67.36%), Query Frame = 3 Query: 12 QNLCSELATMGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAAFRTMWAEFEWENKVAVNTVIQDEKEFLDHIIKSTNMKCLTAPSAL-DGDCGFLAANLYAKSVFGEDALVNVSIEKQT-DGKLSGYIRIRSKTQGIALSLGDKITLKQK 584 +NL + AT+GDLK+++ PQ + P + +KVSS +TGVIFGNI+Y+ ++ + V+LND+H+DIMDYI PA D FRTMW FEWENK++V + + +L ++K TNM LT +L + DC FL+ NLYAKS FGEDAL N+ IEK + + GY+RIRSK QG+ALSLGD++ L K Sbjct: 771 KNLHVQFATLGDLKIIDTPQKTNVIPHGFHKFTVTVKVSSADTGVIFGNIIYDGAHGEDARYVILNDVHVDIMDYIKPATADDEHFRTMWNAFEWENKISVKSQLPTLHAYLRELVKGTNMGILTPSESLGEDDCRFLSCNLYAKSSFGEDALANLCIEKDSKTNDVIGYVRIRSKGQGLALSLGDRVALIAK 963 The following BLAST results are available for this feature:
BLAST of EY710955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710955 ID=EY710955; Name=EY710955; organism=Citrus sinensis; type=EST; length=923bpback to top |