EY710949

Overview
NameEY710949
Unique NameEY710949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 3.113e-23
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 2
Query:  425 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            L PVD FV+T D   EPP+IT NTVLS+LAVDYPV K++CYVSDD  + L F SL E ++FA+ W PFCKKY++  RAP  YF
Sbjct:  264 LAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYF 346          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.524e-23
Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 2
Query:  422 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            +LP +D+FV+TAD E EPP++T NT+LS+LAVDYPV KLACY+SDD  + L F +L + + FA  W PFC+K+N+  R P  YF
Sbjct:  398 DLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYF 481          

HSP 2 Score: 21.1718 bits (43), Expect = 8.524e-23
Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 3
Query:  189 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 302
            W ++  CE  F   W+L    K  P+   T    L+ER
Sbjct:  347 WGMSTTCELWFALSWLLDQLPKLCPVNRLTDLGVLKER 384          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 8.528e-23
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 2
Query:  422 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            +LP +D+FV+TAD E EP + T  T+LS+LAVDYPV KLACYVSDD  + L F ++ EA+ FA +W PFCKK+++  R P  YF
Sbjct:  377 DLPGLDVFVSTADPEKEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYF 460          

HSP 2 Score: 26.1794 bits (56), Expect = 8.528e-23
Identity = 12/38 (31.58%), Postives = 20/38 (52.63%), Query Frame = 3
Query:  189 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 302
            W ++ +CE  F F W+L +  K  P+   T    L+E+
Sbjct:  326 WGMSIVCELWFAFSWLLDMLPKVNPVNRSTDLAVLKEK 363          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.057e-23
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 2
Query:  425 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L + ++FA+ W PFCKK+N+  RAP  YF
Sbjct:  353 LAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSDTAEFARKWVPFCKKFNIEPRAPEWYF 435          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.183e-22
Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 2
Query:  425 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            L PVD+FV+T D   EPP++T NTVLS+LA+DYPV K++CYVSDD  S L F SL E ++FA+ W PFCKK+++  RAP  YF
Sbjct:  314 LAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYF 396          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.545e-22
Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 2
Query:  422 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            +LP +D+FVT+AD E EPP++T NT+LS+LA DYPV KLACY+SDD  + L+F +L E + FA+ W PFC+K+ V  R P  YF
Sbjct:  407 DLPGIDVFVTSADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYF 490          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.545e-22
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 2
Query:  425 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L E ++FA+ W PFCKKY +  RAP  YF
Sbjct:  352 LSPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYCIEPRAPEWYF 434          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.878e-22
Identity = 45/84 (53.57%), Postives = 62/84 (73.81%), Query Frame = 2
Query:  422 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            +LP  D+FV+TAD E EPP++T NT+LS+LA +YPV KL+CYVSDD  + L F ++ EA+ FA +W PFC+K+ +  R P  YF
Sbjct:  377 DLPGFDVFVSTADPEKEPPLVTANTILSILAAEYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHAIEPRNPDSYF 460          

HSP 2 Score: 24.6386 bits (52), Expect = 1.878e-22
Identity = 12/38 (31.58%), Postives = 19/38 (50.00%), Query Frame = 3
Query:  189 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 302
            W ++ +CE  F   W+L    K  P+   T  Q L+E+
Sbjct:  326 WGMSVVCELWFALSWLLDQLPKLCPINRATDLQVLKEK 363          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.018e-22
Identity = 46/84 (54.76%), Postives = 65/84 (77.38%), Query Frame = 2
Query:  422 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            +LP +D+FV+TADAE EPP++T NT+LS+L+VDYPV KL+ Y+SDD  S + F ++ EA+ FAK+W PFC+K+ +  R P  YF
Sbjct:  202 DLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYF 285          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.018e-22
Identity = 47/88 (53.41%), Postives = 65/88 (73.86%), Query Frame = 2
Query:  410 NRIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            N   +LP +D+FV+TAD E EPP++T NT+LS+LA DYPV KL+CYVSDD  + L F ++ EA+ FA +W PFC+K+++  R P  YF
Sbjct:  392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYF 479          
The following BLAST results are available for this feature:
BLAST of EY710949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA4_ORYSI3.113e-2361.45Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CSLD5_ARATH8.524e-2355.95Cellulose synthase-like protein D5 OS=Arabidopsis ... [more]
CSLD3_ORYSJ8.528e-2355.95Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CESA2_ARATH9.057e-2360.24Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA7_ARATH1.183e-2259.04Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CSLD4_ORYSJ1.545e-2255.95Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CESA6_ARATH1.545e-2261.45Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CSLD2_ARATH1.878e-2253.57Cellulose synthase-like protein D2 OS=Arabidopsis ... [more]
CSLD6_ARATH2.018e-2254.76Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLD2_ORYSJ2.018e-2253.41Cellulose synthase-like protein D2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-A03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710949 ID=EY710949; Name=EY710949; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGCGGACGCGTGGGTTGTTTTTCAAGCTCATGGCCAATACA
AAGTCGTCATGTCTCCCTCTATACGAAAAAGTTTTTCATAAAAACACATA
TCATAGGGCTTTAGATGTTATCATCTTGTTCCTTCTTCTATGTCTGCTCT
TCTATCGGCTCTCAACGTTGAAGAATCATGGATTTGCTTGGTTTCTTGCT
TTTCTATGTGAGTCTTGTTTTACTTTCATCTGGATTCTCATCGTCAACTG
CAAGTGGACTCCTTTGACCTACAAAACATATCCCCAACGTCTCCAAGAAA
GGTAACAAATCAAATAACGTTAGCATTAATAATTTCCGCATCATTTGCAA
TTGTCTTTGTCATTTTGCAAGTTACTACACACACACACACACACACATGT
GTACGACTCAACAGGATACAGGAGCTGCCCCCAGTGGACATGTTTGTGAC
AACTGCTGATGCTGAACTCGAGCCGCCAATCATCACTGTAAACACAGTGC
TGTCTTTGTTGGCAGTTGATTATCCAGTTCACAAGCTCGCTTGCTATGTT
TCTGATGATGCCTGCTCACCTCTCAATTTCTACTCTCTTGTTGAAGCTTC
TAAATTCGCTAAGCTTTGGGGTCCATTCTGTAAAAAGTATAATGTTCNAA
TTAGAGCTCCCTTTAGATACTTCCCAGATAGTGAGCCGTCCGATTCCAGN
TCAGGGGGACTCCCTGCAGACTGGAAAAAACATGAAGANGAATGACTGNT
TTCTCCATACAGAACGCATGAATCATCCCAACATAGTGAAGGTATATNCN
GAGAACAAGGAAGTCTCTCGATGAGATAACACATTTAGTTACTATTCAGA
GAGAAAAGCCAAGCATCCCCTCACTACAAGCAGGGCCATGAATGNATGAC
TGCGACTGNATGCCCACATCCAGAGATGGTCTTCAGCTTTG
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