EY710949

Overview
NameEY710949
Unique NameEY710949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.018e-22
Identity = 47/88 (53.41%), Postives = 65/88 (73.86%), Query Frame = 2
Query:  410 NRIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            N   +LP +D+FV+TAD E EPP++T NT+LS+LA DYPV KL+CYVSDD  + L F ++ EA+ FA +W PFC+K+++  R P  YF
Sbjct:  392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYF 479          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.870e-22
Identity = 49/83 (59.04%), Postives = 62/83 (74.70%), Query Frame = 2
Query:  425 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            L  VD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  S L F SL E ++FA+ W PFCKK+++  RAP  YF
Sbjct:  343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYF 425          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.870e-22
Identity = 49/83 (59.04%), Postives = 62/83 (74.70%), Query Frame = 2
Query:  425 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            L  VD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  S L F SL E ++FA+ W PFCKK+++  RAP  YF
Sbjct:  343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYF 425          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.667e-22
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 2
Query:  422 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            +LP +D+FV+TAD E EP ++T NT+LS+LA DYPV KLACYVSDD  + L F ++ EA+ FA LW PFC+K+ +  R P  YF
Sbjct:  347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYF 430          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 7.667e-22
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 2
Query:  422 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            +LP +D+FV+TAD E EP ++T NT+LS+LA DYPV KLACYVSDD  + L F ++ EA+ FA LW PFC+K+ +  R P  YF
Sbjct:  347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYF 430          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.308e-21
Identity = 49/83 (59.04%), Postives = 61/83 (73.49%), Query Frame = 2
Query:  425 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            L P+D FV+T D   EPPIIT NTVLS+LAVDYPV +++CYVSDD  S L F +L E ++FA+ W PFCKK+ +  RAP  YF
Sbjct:  289 LAPIDFFVSTVDPLKEPPIITANTVLSILAVDYPVDRVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKFTIEPRAPEFYF 371          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.913e-21
Identity = 45/84 (53.57%), Postives = 64/84 (76.19%), Query Frame = 2
Query:  422 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            +LP VD+FV+TAD E EPP++T NT+LS+LAVDYP+ KL+ Y+SDD  + L F ++ EA +FA+ W PFC+K+++  R P  YF
Sbjct:  263 DLPGVDVFVSTADPEKEPPLVTANTLLSILAVDYPIEKLSAYISDDGGAILTFEAMAEAVRFAEYWVPFCRKHDIEPRNPDSYF 346          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.107e-20
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 2
Query:  422 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            ELP VD+FV TAD   EPP++ ++TVLS++A DY   KL  Y+SDDA S L FY L EAS+FAK W PFCKKY V  R+P  YF
Sbjct:  110 ELPSVDIFVCTADPTAEPPMLVISTVLSVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCKKYKVEPRSPAAYF 193          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.446e-20
Identity = 52/115 (45.22%), Postives = 71/115 (61.74%), Query Frame = 2
Query:  344 FAIVFVILQVXXXXXXXXCVRLNRIQE-----LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            FA+ +VI Q             NR+ E     LP VD+FV TAD   EPP + ++T+LS++A +YP  K++ Y+SDD  S L FY+L EAS FAK W PFC++YN+  R+P  YF
Sbjct:   65 FAVYWVITQSVRWCPVRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYF 179          
BLAST of EY710949 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.466e-20
Identity = 51/113 (45.13%), Postives = 72/113 (63.72%), Query Frame = 2
Query:  344 FAIVFVILQVXXXXXXXXCVRLNRIQE---LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWGPFCKKYNVXIRAPFRYF 673
            FA ++V+ Q+         V +  + +   LP +D+FVTTAD + EPP+ T NTVLS+LA  YP  K+ CYVSDDA + +   ++VEA++FA LW PFC+K+ V  R P  YF
Sbjct:  112 FAFMWVLDQLPKTMPVRRAVDVTALNDDTLLPAMDVFVTTADPDKEPPLATANTVLSILAAGYPAGKVTCYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPRNPEAYF 224          
The following BLAST results are available for this feature:
BLAST of EY710949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLD2_ORYSI2.018e-2253.41Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CESA9_ORYSJ5.870e-2259.04Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI5.870e-2259.04Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CSLD1_ORYSJ7.667e-2255.95Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI7.667e-2255.95Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CESA7_ORYSJ1.308e-2159.04Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CSLD1_ARATH2.913e-2153.57Cellulose synthase-like protein D1 OS=Arabidopsis ... [more]
CSLE2_ORYSJ1.107e-2059.52Cellulose synthase-like protein E2 OS=Oryza sativa... [more]
CSLE6_ORYSJ1.446e-2045.22Cellulose synthase-like protein E6 OS=Oryza sativa... [more]
CSLF7_ORYSJ2.466e-2045.13Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-002-A03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710949 ID=EY710949; Name=EY710949; organism=Citrus sinensis; type=EST; length=941bp
CCACGCGTCCGCGGACGCGTGGGTTGTTTTTCAAGCTCATGGCCAATACA
AAGTCGTCATGTCTCCCTCTATACGAAAAAGTTTTTCATAAAAACACATA
TCATAGGGCTTTAGATGTTATCATCTTGTTCCTTCTTCTATGTCTGCTCT
TCTATCGGCTCTCAACGTTGAAGAATCATGGATTTGCTTGGTTTCTTGCT
TTTCTATGTGAGTCTTGTTTTACTTTCATCTGGATTCTCATCGTCAACTG
CAAGTGGACTCCTTTGACCTACAAAACATATCCCCAACGTCTCCAAGAAA
GGTAACAAATCAAATAACGTTAGCATTAATAATTTCCGCATCATTTGCAA
TTGTCTTTGTCATTTTGCAAGTTACTACACACACACACACACACACATGT
GTACGACTCAACAGGATACAGGAGCTGCCCCCAGTGGACATGTTTGTGAC
AACTGCTGATGCTGAACTCGAGCCGCCAATCATCACTGTAAACACAGTGC
TGTCTTTGTTGGCAGTTGATTATCCAGTTCACAAGCTCGCTTGCTATGTT
TCTGATGATGCCTGCTCACCTCTCAATTTCTACTCTCTTGTTGAAGCTTC
TAAATTCGCTAAGCTTTGGGGTCCATTCTGTAAAAAGTATAATGTTCNAA
TTAGAGCTCCCTTTAGATACTTCCCAGATAGTGAGCCGTCCGATTCCAGN
TCAGGGGGACTCCCTGCAGACTGGAAAAAACATGAAGANGAATGACTGNT
TTCTCCATACAGAACGCATGAATCATCCCAACATAGTGAAGGTATATNCN
GAGAACAAGGAAGTCTCTCGATGAGATAACACATTTAGTTACTATTCAGA
GAGAAAAGCCAAGCATCCCCTCACTACAAGCAGGGCCATGAATGNATGAC
TGCGACTGNATGCCCACATCCAGAGATGGTCTTCAGCTTTG
back to top