EY710939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFN_ARATH (Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 2.117e-16 Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 3 Query: 105 SPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKL 419 SP E QS+Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++FD++G L + +W++ + W +FC+ V+KIFIY+ EEVK L + L Sbjct: 497 SPTEIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQL-QARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSRKSL 603
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 2.764e-16 Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 3 Query: 105 SPQES-QSRQIRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPK 410 SP+E Q RS KV MQG AVGRAVDLT Y++L+K+LE+MF+IEG+L KW +V+ W++FC +K+FIY ++EVKK+ K Sbjct: 500 SPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKKMRSK 601
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFI_ARATH (Auxin response factor 9 OS=Arabidopsis thaliana GN=ARF9 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.764e-16 Identity = 45/104 (43.27%), Postives = 67/104 (64.42%), Query Frame = 3 Query: 105 SPQESQSRQ---IRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSP 407 SP+E QS+Q RS TKV MQG+ VGRAVDL Y +L+ +E++FDI+G+L S +W++V+ W +FC+ V++IFI++ EEVKK++P Sbjct: 510 SPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGEL-RSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTP 612
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFU_ARATH (Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15 Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 105 SPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKL 419 SP E QS+Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++FDI+G L + +W++ + W +FC V+KI IY+ EEVK L L Sbjct: 498 SPIEIQSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL-QTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSKSL 604
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFT_ARATH (Auxin response factor 20 OS=Arabidopsis thaliana GN=ARF20 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 5.213e-15 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 3 Query: 105 SPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKL 419 SP E QS+Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++FD++G L + +W++ + W +FC V+KI IY+ EEVK L L Sbjct: 482 SPIEIQSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQL-QTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSKSL 588
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFM_ARATH (Auxin response factor 13 OS=Arabidopsis thaliana GN=ARF13 PE=2 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 8.892e-15 Identity = 43/107 (40.19%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 105 SPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVK 416 SP+E QS + RS KVHMQG+A+ RAVDLT Y L++KLEE+FD++ +L + +W++V+ W +FC+ ++IFI + EE+KK+ K K Sbjct: 495 SPKEVQSTEFNFTRSRIKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDEL-RTRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKNK 600
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFA_ORYSJ (Auxin response factor 1 OS=Oryza sativa subsp. japonica GN=ARF1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.379e-14 Identity = 49/108 (45.37%), Postives = 61/108 (56.48%), Query Frame = 3 Query: 105 SPQESQSRQ---IRSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIYTAEEVKKLSPKVKL 419 SPQE QS Q R+ KV M G AVGRAVDL D YE L+ +LEEMF+I+ DL +KW+V + W +FC VRKI +Y E+ KK+ P KL Sbjct: 582 SPQEIQSHQNYTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIK-DL---KQKWKVAFTDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKIEPHPKL 685
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFL_ARATH (Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12 Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 3 Query: 105 SPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFI 374 SP E Q++Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++FDI+G L + +W++ + W +FC+ V+KIFI Sbjct: 498 SPTEIQNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL-QTRNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFV_ARATH (Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 36/94 (38.30%), Postives = 57/94 (60.64%), Query Frame = 3 Query: 105 SPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFIY 377 SP E QS+Q R+CTKV MQG+ + RAVDL+ + Y+ L+ +LEE+FD++G L + +W++ + W +FC+ V+KI I+ Sbjct: 496 SPTEIQSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQL-QTRNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIF 588
BLAST of EY710939 vs. ExPASy Swiss-Prot
Match: ARFO_ARATH (Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 34/93 (36.56%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 105 SPQESQSRQI---RSCTKVHMQGIAVGRAVDLTRFDCYEDLLKKLEEMFDIEGDLCGSTKKWQVVYFXXXXXXXXXXXXLWHDFCSGVRKIFI 374 SP + QS+Q R+CTKV MQG+ +GRAVDL+ + Y+ L+ +LE++FD++G L + +W++++ W +FC+ V++I+I Sbjct: 498 SPTKIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQL-QTRNQWKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 589 The following BLAST results are available for this feature:
BLAST of EY710939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710939 ID=EY710939; Name=EY710939; organism=Citrus sinensis; type=EST; length=929bpback to top |