EY710936

Overview
NameEY710936
Unique NameEY710936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PB_ARATH (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Arabidopsis thaliana GN=GAPB PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.420e-55
Identity = 121/207 (58.45%), Postives = 132/207 (63.77%), Query Frame = 1
Query:   25 LTTEPGKG-DIPTYVVGVNVVAPKPDEP-IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            + T P KG DIPTYV+GVN      D   IISNASCTTNCLAPF KVLD++FGI+KGTMTTTHSYTGDQ                  NIVPTST                 NGIALRVPTPNVSVVDLVI V KK   AE+VN AFR++A+  +KGIL VCD PLVSVDFRC              MG  MVKV+AWYDNEWGYSQR
Sbjct:  200 IITAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVLDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVINVEKKGLTAEDVNEAFRKAANGPMKGILDVCDAPLVSVDFRCSDVSTTIDSSLTMVMGDDMVKVVAWYDNEWGYSQR 406          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.677e-54
Identity = 126/232 (54.31%), Postives = 140/232 (60.34%), Query Frame = 1
Query:   25 LTTEPGKG-DIPTYVVGVNVVAPKPDEP-IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKK-TFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQRGGGSGRL---GWPTLGVEVNTKSGN 702
            + T P KG DIPTYVVGVN      D   IISNASCTTNCLAPFVKVLD++ GI+KGTMTTTHSYTGDQ                  NIVPTST                 NGIALRVPTPNVSVVDLV+ + K    AE+VN AFR++A   LKG+L VCD PLVSVDFRC              MG  MVKV+AWYDNEWGYSQR      L    WP  G+E +  SG+
Sbjct:  203 IITAPAKGSDIPTYVVGVNEKDYGHDVANIISNASCTTNCLAPFVKVLDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKWP--GLEGSVASGD 432          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3)

HSP 1 Score: 203.756 bits (517), Expect = 1.244e-51
Identity = 115/206 (55.83%), Postives = 126/206 (61.17%), Query Frame = 1
Query:   25 LTTEPGKG-DIPTYVVGVNVVAPKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T PGKG +I TYVVGVN    K +E  +ISNASCTTNCLAPF KV++  FGIIKGTMTTTHSYTGDQ                  NIVPTST                 NGIALRVPTPNVSVVDLV+QV K T AE+VN   +E+A+  LKG+L   D  LVS DFR               MG  MVKVIAWYDNEWGYSQR
Sbjct:  119 LITAPGKGPNIGTYVVGVNAHEYKHEEYEVISNASCTTNCLAPFGKVINDNFGIIKGTMTTTHSYTGDQRILDASHRDLRRARAAAVNIVPTSTGAAKAVALVIPELQGKLNGIALRVPTPNVSVVDLVVQVEKNTIAEQVNGVLKEAANTSLKGVLEYTDLELVSSDFRGTDCSSTVDGSLTMVMGGDMVKVIAWYDNEWGYSQR 324          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.796e-50
Identity = 107/206 (51.94%), Postives = 129/206 (62.62%), Query Frame = 1
Query:   25 LTTEPGKGD-IPTYVVGVNVVAPKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T PGKG+ + T+VVGVN      D+  I+SNASCTTNC+APF+KVLD +FG+++G MTTTHSYTGDQ                  NIVPT+T                 NGIALRVPTPNVSV D+V+QVSKKTF EEVN A  ++A+  +KGI+   DEPLVS D+R               MG  M+KV+AWYDNEWGYSQR
Sbjct:  198 LITAPGKGEGVGTFVVGVNDHLYSHDKFDIVSNASCTTNCMAPFMKVLDDEFGVVRGMMTTTHSYTGDQRLLDAGHRDLRRARSAALNIVPTTTGAAKAVALVVPTLAGKLNGIALRVPTPNVSVCDVVMQVSKKTFKEEVNGALLKAANGSMKGIIKYSDEPLVSCDYRGTDESTIIDSSLTMVMGDDMLKVVAWYDNEWGYSQR 403          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 3.063e-50
Identity = 107/206 (51.94%), Postives = 128/206 (62.14%), Query Frame = 1
Query:   25 LTTEPGKGD-IPTYVVGVNVVAPKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T PGKGD I T+VVGVN      D+  I+SNASCTTNC+APF+KVLD +FG+++G MTTTHSYTGDQ                  NIVPT+T                 NGIALRVPTPNVSV D+V+QV+KKTF EEVN A  ++++  +KGI+   DEPLVS D R               MG  M+KV+AWYDNEWGYSQR
Sbjct:  196 LITAPGKGDGIGTFVVGVNEKDYSHDKYDIVSNASCTTNCMAPFMKVLDDEFGVVRGMMTTTHSYTGDQRLLDAGHRDLRRARSAALNIVPTTTGAAKAVALVVPSLKGKLNGIALRVPTPNVSVCDVVMQVNKKTFKEEVNGALLKASEGAMKGIIKYSDEPLVSCDHRGTDESTIIDSSLTMVMGDDMIKVVAWYDNEWGYSQR 401          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 2.055e-46
Identity = 102/205 (49.76%), Postives = 122/205 (59.51%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVAPKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T PGK +  T+V+GVN      +   IISNASCTTNCLAP  KVL+ KFGIIKG+MTTTHSYTGDQ                  NIVPTST                 NG+ALRVPTPNVS+VD V+QV K+T  EEVN A +++++  LKGIL   +  LVS D++               MG  +VKV+AWYDNEWGYSQR
Sbjct:  120 LITAPGKNEDGTFVIGVNHHDYDHNVHHIISNASCTTNCLAPIAKVLNDKFGIIKGSMTTTHSYTGDQRLLDASHRDLRRARAAAINIVPTSTGAAKAVALVIPELKGKLNGVALRVPTPNVSMVDFVVQVEKRTITEEVNQALKDASEGPLKGILDYSELQLVSSDYQGTDASSIVDASLTLVMGNDLVKVMAWYDNEWGYSQR 324          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.505e-46
Identity = 102/205 (49.76%), Postives = 122/205 (59.51%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVAPKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L T PGK +  T+V+GVN      +   IISNASCTTNCLAP  KVL+ KFGIIKG+MTTTHSYTGDQ                  NIVPTST                 NG+ALRVPTPNVS+VD V+QV K+T  EEVN A +++++  LKGIL   +  LVS D++               MG  +VKV+AWYDNEWGYSQR
Sbjct:  120 LITAPGKNEDGTFVMGVNHHDYDHNLHNIISNASCTTNCLAPIAKVLNDKFGIIKGSMTTTHSYTGDQRLLDASHRDLRRARAAAINIVPTSTGAAKAVALVIPELKGKLNGVALRVPTPNVSMVDFVVQVEKRTITEEVNQALKDASEGPLKGILDYSELQLVSSDYQGTDASSIVDANLTLVMGNDLVKVMAWYDNEWGYSQR 324          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P_BACST (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus stearothermophilus GN=gap PE=1 SV=5)

HSP 1 Score: 166.007 bits (419), Expect = 2.874e-40
Identity = 91/205 (44.39%), Postives = 117/205 (57.07%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVAPKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            + + P K +  T V+GVN     P    +ISNASCTTNCLAPF KVL ++FGI++G MTT HSYT DQ                  +I+PT+T                 NG+A+RVPTPNVSVVDLV ++ K+   EEVNAA + +A+ ELKGIL+  +EPLVS D+                +   MVKV++WYDNE GYS R
Sbjct:  118 IISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHR 322          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 1.092e-39
Identity = 90/211 (42.65%), Postives = 120/211 (56.87%), Query Frame = 1
Query:    7 GLPQERLTTEPGKGDIPTYVVGVNVVA-PKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            G  ++ + + P   +  T V+GVN       +  ++SNASCTTNCLAPF KVL++KFG+ +G MTT HSYT DQ                  N++PTST                 NG A+RVPT NVS+VDLV+++ K+   EEVNAAF+ +A+ ELKGIL   +EPLVS+D+                M  +MVKV++WYDNE GYS R
Sbjct:  111 GSVKKVIISAPASDEDITVVMGVNHEQYDAANHNVVSNASCTTNCLAPFAKVLNEKFGVKRGMMTTIHSYTNDQQILDLPHKDLRRARAAAENMIPTSTGAAKAVALVLPELKGKLNGGAVRVPTANVSLVDLVVELDKEVTVEEVNAAFKAAAEGELKGILGYSEEPLVSIDYNGCTASSTIDALSTMVMEGNMVKVLSWYDNETGYSNR 321          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P1_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus subtilis GN=gapA PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 1.426e-39
Identity = 93/205 (45.37%), Postives = 116/205 (56.59%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVA-PKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            + + P   +  T V+GVN       +  +ISNASCTTNCLAPF KVL+ KFGI +G MTT HSYT DQ                  NI+PTST                 NG A+RVPTPNVS+VDLV +++++  AEEVNAA +E+A+ +LKGIL   +EPLVS D+                M   MVKVI+WYDNE GYS R
Sbjct:  118 IISAPANEEDITIVMGVNEDKYDAANHDVISNASCTTNCLAPFAKVLNDKFGIKRGMMTTVHSYTNDQQILDLPHKDYRRARAAAENIIPTSTGAAKAVSLVLPELKGKLNGGAMRVPTPNVSLVDLVAELNQEVTAEEVNAALKEAAEGDLKGILGYSEEPLVSGDYNGNKNSSTIDALSTMVMEGSMVKVISWYDNESGYSNR 322          
The following BLAST results are available for this feature:
BLAST of EY710936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3PB_ARATH1.420e-5558.45Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PB_SPIOL2.677e-5454.31Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3P2_SYNY31.244e-5155.83Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Syne... [more]
G3PA_GRAVE1.796e-5051.94Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]
G3PA_CHOCR3.063e-5051.94Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]
G3P2_ANAVT2.055e-4649.76Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anab... [more]
G3P2_ANASP3.505e-4649.76Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anab... [more]
G3P_BACST2.874e-4044.39Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3P1_BACCE1.092e-3942.65Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Baci... [more]
G3P1_BACSU1.426e-3945.37Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-H02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710936 ID=EY710936; Name=EY710936; organism=Citrus sinensis; type=EST; length=954bp
AAACACGGGCTTCCGCAAGAAAGACTTACTACAGAACCGGGTAAGGGTGA
CATCCCAACCTACGTTGTTGGTGTCAATGTTGTTGCTCCCAAACCAGATG
AGCCCATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTC
GTCAAGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCAC
CACACACTCGTACACTGGCGACCAAAGGCTACTCGATGCTAGCCACCGTG
ACCTCAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACT
GGTGCGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACT
AAACGGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATC
TTGTCATTCAGGTGTCGAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCT
TTCAGAGAAAGCGCTGACAATGAACTGAAAGGGATCCTCTCCGTGTGCGA
CGAGCCCCTCGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCAACCG
TTGATTCATCTCTCACACTTGTCATGGGAAGACACATGGTTAAGGTGATT
GCATGGTATGACAATGAATGGGGTTACTCTCAAAGGGGTGGGGGATCTGG
CCGACTTGGTTGGCCAACACTGGGAGTGGAAGTGAATACTAAATCCGGAA
ACTCGGCGGTAATCGGCACCAACAAGGTCCTTGTTGTTCATTTTTGGGTC
CCCCCATTTATTGTACCGGGCCTTAAAATTGGGAGAAGGGTGACACTATC
TTTTTTAGGGAACGCTTGTCCGCTTGCCTGGCATCAACCAATAAGGATAA
AATTCCTTCCATTCAAAAAACAAGAATAAAAAGGGCGGGCGCCTCTAAGG
GTACGCACCTACGATTCGGGGCGGCGGGGCGGATACTCTTCTTAAGTGCC
ACCC
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