EY710936

Overview
NameEY710936
Unique NameEY710936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length954
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: E4PD_PSYIN (D-erythrose-4-phosphate dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=epd PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.531e-25
Identity = 68/203 (33.50%), Postives = 94/203 (46.31%), Query Frame = 1
Query:   31 TEPGKGDIP-TYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            + P   D+  T V G+N      DE  IS ASCTTNC+ P +  LD+ F I  GT+TT HS   DQ                  +I+P  T                   IA+RVPT NV+ +DL I VSK    +E+N    ++++  LK IL   + PLVS+DF                   ++VK++ W DNEWG++ R
Sbjct:  123 SHPADPDVDATVVYGINHQQLTGDETFISGASCTTNCMVPVIDTLDKHFAIKCGTITTIHSAMNDQPVIDAYHSDLRRTRAASQSIIPVDTKLAAGIERILPKFANKFEAIAVRVPTINVTAMDLSITVSKDVTIQEINDCLLKASETNLKDILGYTEAPLVSIDFNHDPRSCIIDGTQTRVSDGNLVKLLVWCDNEWGFANR 325          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P_BUCBP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=gapA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.999e-25
Identity = 65/205 (31.71%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   25 LTTEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            + T P K + P +V GVN       + I+SNASCTTNCLAP  KV++ +F I++G MTT H+ T  Q                   NI+P++T                  GIA R+PT NVSVVDL ++  K    E++    + ++++++K ++   ++ +VS DF                +  + +K+++WYDNE GYS +
Sbjct:  118 IITSPPKDNTPMFVRGVNF-NEYVGQKIVSNASCTTNCLAPLAKVINDEFEIVEGLMTTVHATTATQKTVDGVSYKDWRGGRSALQNIIPSTTGAARAVGKVLPELNGKLTGIAFRIPTANVSVVDLTVRNKKIATYEDICQIIKYASNHDMKEVIGYTEDHVVSSDFNGNTLTSIFDAKAGLSLNNNFIKLVSWYDNECGYSSK 321          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: E4PD_ALISL (D-erythrose-4-phosphate dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=epd PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.999e-25
Identity = 62/205 (30.24%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   25 LTTEPGKGDIP-TYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L + PG  D+  T + GVN     P+  ++SN SCTTNC+ P +K +D  FGI  GT+TT HS   DQ                  +I+P  T                   I++RVPT NV+ +DL + ++      ++N     ++   L  I+   + PLVS+DF                   H+VK++ W DNEWG++ R
Sbjct:  125 LFSHPGSADLDNTIIYGVNHDTLLPEHRVVSNGSCTTNCIIPVIKAIDDAFGIESGTITTIHSAMNDQPVIDAYHTDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASQCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANR 329          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P_ONCMY (Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorhynchus mykiss GN=gapdh PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.454e-25
Identity = 70/208 (33.65%), Postives = 98/208 (47.12%), Query Frame = 1
Query:   19 ERLTTEPGKGDIPTYVVGVNVVAPKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            +R+       D P +V+GVN     P    I+SNASCTTNCLAP  KV+   FGI +  MTT H+YT  Q                   NI+P ST                  G+A RVP  +VSVV+L  ++S+     E+  A +++A+  +KG +   +  +VS DF                   + VK+I+WYDNE+GYS R
Sbjct:  116 KRVVVSAPSPDAPMFVMGVNEDKFDPSSMTIVSNASCTTNCLAPLAKVIHDNFGIEEALMTTVHAYTATQKTVDGPSAKAWRDGRGAHQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPVADVSVVELTCRLSRPGSYAEIKGAVKKAAEGPMKGYVGYTEYSVVSSDFIGDTHSSMFDAGAGISFNDNFVKLISWYDNEFGYSHR 323          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: E4PD_VIBFM (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=epd PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.454e-25
Identity = 63/205 (30.73%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   25 LTTEPGKGDIP-TYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L + PG  D+  T + GVN     P+  I+SN SCTTNC+ P +K +D  FGI  GT+TT HS   DQ                  +I+P  T                   I++RVPT NV+ +DL + ++      ++N     ++   L  I+   + PLVS+DF                   H+VK++ W DNEWG++ R
Sbjct:  125 LFSHPGGSDLDNTIIYGVNHDTLLPEHRIVSNGSCTTNCIIPVIKAIDDAFGIDSGTITTIHSSMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANR 329          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: E4PD_VIBF1 (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=epd PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.454e-25
Identity = 63/205 (30.73%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   25 LTTEPGKGDIP-TYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGRHMVKVIAWYDNEWGYSQR 636
            L + PG  D+  T + GVN     P+  I+SN SCTTNC+ P +K +D  FGI  GT+TT HS   DQ                  +I+P  T                   I++RVPT NV+ +DL + ++      ++N     ++   L  I+   + PLVS+DF                   H+VK++ W DNEWG++ R
Sbjct:  125 LFSHPGGSDLDNTIIYGVNHDTLLPEHRIVSNGSCTTNCIIPVIKAIDDAFGIDSGTITTIHSSMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDFNHDPHSAIVDGSQTRVSNGHLVKMLVWCDNEWGFANR 329          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P_STRP8 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M18 GN=gap PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.296e-24
Identity = 72/205 (35.12%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   31 TEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXM---GRHMVKVIAWYDNEWGYS 630
            T PG  D+ T V   N       E +IS ASCTTNCLAP  K L   FGI KG MTT H+YTGDQ                    NIVP ST                 +G A RVP P  SV +LV+ + K    +E+NAA + ++++         ++P+VS D                 M   G  +VKV++WYDNE  Y+
Sbjct:  121 TAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVVTLDKNVSVDEINAAMKAASNDS----FGYTEDPIVSSDIVGVSYGSLFDATQTKVMEVDGSQLVKVVSWYDNEMSYT 321          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P_STRP6 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M6 GN=gap PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 1.296e-24
Identity = 72/205 (35.12%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   31 TEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXM---GRHMVKVIAWYDNEWGYS 630
            T PG  D+ T V   N       E +IS ASCTTNCLAP  K L   FGI KG MTT H+YTGDQ                    NIVP ST                 +G A RVP P  SV +LV+ + K    +E+NAA + ++++         ++P+VS D                 M   G  +VKV++WYDNE  Y+
Sbjct:  121 TAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVVTLDKNVSVDEINAAMKAASNDS----FGYTEDPIVSSDIVGVSYGSLFDATQTKVMEVDGSQLVKVVSWYDNEMSYT 321          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P_STRP3 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M3 GN=gap PE=3 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 1.296e-24
Identity = 72/205 (35.12%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   31 TEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXM---GRHMVKVIAWYDNEWGYS 630
            T PG  D+ T V   N       E +IS ASCTTNCLAP  K L   FGI KG MTT H+YTGDQ                    NIVP ST                 +G A RVP P  SV +LV+ + K    +E+NAA + ++++         ++P+VS D                 M   G  +VKV++WYDNE  Y+
Sbjct:  121 TAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVVTLDKNVSVDEINAAMKAASNDS----FGYTEDPIVSSDIVGVSYGSLFDATQTKVMEVDGSQLVKVVSWYDNEMSYT 321          
BLAST of EY710936 vs. ExPASy Swiss-Prot
Match: G3P_STRP1 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M1 GN=gap PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.296e-24
Identity = 72/205 (35.12%), Postives = 93/205 (45.37%), Query Frame = 1
Query:   31 TEPGKGDIPTYVVGVNVVAPKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNVSVVDLVIQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXM---GRHMVKVIAWYDNEWGYS 630
            T PG  D+ T V   N       E +IS ASCTTNCLAP  K L   FGI KG MTT H+YTGDQ                    NIVP ST                 +G A RVP P  SV +LV+ + K    +E+NAA + ++++         ++P+VS D                 M   G  +VKV++WYDNE  Y+
Sbjct:  121 TAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVVTLDKNVSVDEINAAMKAASNDS----FGYTEDPIVSSDIVGVSYGSLFDATQTKVMEVDGSQLVKVVSWYDNEMSYT 321          
The following BLAST results are available for this feature:
BLAST of EY710936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
E4PD_PSYIN1.531e-2533.50D-erythrose-4-phosphate dehydrogenase OS=Psychromo... [more]
G3P_BUCBP1.999e-2531.71Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
E4PD_ALISL1.999e-2530.24D-erythrose-4-phosphate dehydrogenase OS=Aliivibri... [more]
G3P_ONCMY4.454e-2533.65Glyceraldehyde-3-phosphate dehydrogenase OS=Oncorh... [more]
E4PD_VIBFM4.454e-2530.73D-erythrose-4-phosphate dehydrogenase OS=Vibrio fi... [more]
E4PD_VIBF14.454e-2530.73D-erythrose-4-phosphate dehydrogenase OS=Vibrio fi... [more]
G3P_STRP81.296e-2435.12Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_STRP61.296e-2435.12Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_STRP31.296e-2435.12Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_STRP11.296e-2435.12Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-H02-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710936 ID=EY710936; Name=EY710936; organism=Citrus sinensis; type=EST; length=954bp
AAACACGGGCTTCCGCAAGAAAGACTTACTACAGAACCGGGTAAGGGTGA
CATCCCAACCTACGTTGTTGGTGTCAATGTTGTTGCTCCCAAACCAGATG
AGCCCATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTC
GTCAAGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCAC
CACACACTCGTACACTGGCGACCAAAGGCTACTCGATGCTAGCCACCGTG
ACCTCAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACT
GGTGCGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACT
AAACGGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATC
TTGTCATTCAGGTGTCGAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCT
TTCAGAGAAAGCGCTGACAATGAACTGAAAGGGATCCTCTCCGTGTGCGA
CGAGCCCCTCGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCAACCG
TTGATTCATCTCTCACACTTGTCATGGGAAGACACATGGTTAAGGTGATT
GCATGGTATGACAATGAATGGGGTTACTCTCAAAGGGGTGGGGGATCTGG
CCGACTTGGTTGGCCAACACTGGGAGTGGAAGTGAATACTAAATCCGGAA
ACTCGGCGGTAATCGGCACCAACAAGGTCCTTGTTGTTCATTTTTGGGTC
CCCCCATTTATTGTACCGGGCCTTAAAATTGGGAGAAGGGTGACACTATC
TTTTTTAGGGAACGCTTGTCCGCTTGCCTGGCATCAACCAATAAGGATAA
AATTCCTTCCATTCAAAAAACAAGAATAAAAAGGGCGGGCGCCTCTAAGG
GTACGCACCTACGATTCGGGGCGGCGGGGCGGATACTCTTCTTAAGTGCC
ACCC
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