EY710868

Overview
NameEY710868
Unique NameEY710868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.098e-32
Identity = 88/226 (38.94%), Postives = 125/226 (55.31%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLSMSLSGLCIVEWRFITT 731
            M+  P++V VTGAA QIGY+L+  +A G +LG D+P+ L +L+I PA +AL GV MEL D AFPLL GV+   D  +   G N+A++VG  PR  GM+R D++  N +I+ A   AL   AA + +V V  NPAN        N       R   L ++   + I     +T   V+D   + IWGNHS++QYPD+    V    G+N +  +     +E  FI T
Sbjct:    1 MSASPLKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALKALEGVVMELDDCAFPLLSGVEIGADPNKIFDGANLALLVGARPRGPGMERSDLLEANGAIFTAQGKALNEVAADDIRVGVTGNPANTNALIAMSNAPDIPRERFSALTRLDHNRAISQLAKKTGAKVTDITKMTIWGNHSATQYPDIFHAEVK---GKNAAEVVGDQNWIENDFIPT 223          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_DESPS (Malate dehydrogenase OS=Desulfotalea psychrophila GN=mdh PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.098e-32
Identity = 84/208 (40.38%), Postives = 112/208 (53.85%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*-KNLRH---------QSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            K PVRV +TGAA  + Y+L+  IA G MLG DQPVIL +L+IP A + L GV +EL D AFPLL G+  + D   A    + A++VG  PR  GM+R D++  N  I+     AL   A P  KVLVV NPAN       KN  +           L  N  L Q+    G         C  SD + +++WGNHS+SQ+PD++   +
Sbjct:    2 KPPVRVAITGAAGHVSYSLIFRIAAGHMLGKDQPVILQLLEIPQAMDVLKGVVLELEDCAFPLLHGLVCSDDVHVAFKDADYAILVGARPRGPGMERSDLIQANGPIFTTQGEALSAEANPEVKVLVVGNPANTNALILLKNAPYINPRNITAMMRLDHNRALFQVAKKMG---------CHCSDVEKMVVWGNHSASQFPDISYAEI 200          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.098e-32
Identity = 86/222 (38.74%), Postives = 122/222 (54.95%), Query Frame = 3
Query:   69 PVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLSMSLSGLCIVEWRFITT 731
            P+++ VTGAA QIGY+L+  IA G + G D PV L +L+I PA +AL GV MEL D AFP L  V+   DA     GV +A++VG  PR +GM+R D++S N +I+ A   AL   AA + ++ V  NPAN        N       R   L ++   + IG    +T   V D + + +WGNHS++QYPD+    V    G N +  ++    +E  FI T
Sbjct:    4 PIKIAVTGAAGQIGYSLLFRIASGALFGGDTPVQLRLLEITPALKALEGVVMELDDCAFPALDSVEIGDDADHIFDGVTLALLVGARPRSKGMERGDLLSANGAIFTAQGKALNRVAADDVRIGVTGNPANTNALIAMSNAPDIPASRFSALTRLDHNRAIGQLAAKTHARVGDIRKMTVWGNHSATQYPDIFHAEV---AGRNAAEVVNDQDWIENEFIPT 222          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_XANOP (Malate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=mdh PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.434e-32
Identity = 88/208 (42.31%), Postives = 118/208 (56.73%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F----*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTAT 668
            K PVRV VTGAA QIGYAL+  IA G MLG DQPVIL +L++    A  AL GV MEL D AFPLL G+  T DA  A   +++A++VG  PR  GM+RKD++ +N  I+ A  +AL   A  + KVLVV NPAN           +L   +      LD   +   +   + +   PV   + +++WGNHS + YPD    T + A+
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLNPNNFTAMLRLDHNRALSQLALKLGK---PVGGIEKLVVWGNHSPTMYPDYRFATSDGAS 206          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_NITEU (Malate dehydrogenase OS=Nitrosomonas europaea GN=mdh PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.434e-32
Identity = 80/198 (40.40%), Postives = 117/198 (59.09%), Query Frame = 3
Query:   69 PVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            P+R+ VTGAA QI Y+L+  IA G MLG+ QPVIL +LDIP + + L+GV MEL D AFPLL  +  T D + A    +IA++VG  PR +GM+RKD++  N  I++    AL      + K+LVV NPAN       KN    S      + ++   + +     +   PVS  + +I+WGNHSS+Q+PD++   ++
Sbjct:    4 PIRIAVTGAAGQISYSLLFRIAAGDMLGSSQPVILQLLDIPESGKVLDGVLMELQDCAFPLLTDIIVTHDPMIAFDQADIAILVGARPRGKGMERKDLLQTNGEIFREQGRALNQVVKRDAKILVVGNPANTNTLITMKNAPDLSPENFSGMLRLDHNRALSQVAMKLNQPVSHIRKMIVWGNHSSTQFPDLSHAEID 201          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_LARHH (Malate dehydrogenase OS=Laribacter hongkongensis (strain HLHK9) GN=mdh PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.434e-32
Identity = 86/210 (40.95%), Postives = 117/210 (55.71%), Query Frame = 3
Query:   69 PVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNL----------RHQSLLR---NYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            PVRV VTGAA QIGY+L+  IA G MLG +QPVIL +LD+P A  A+ GV MEL D AFPLL G+ AT D   A    +I ++VG  PR +GM+R D++  N +I+     A+  +A  + KVLVV NPAN      +             + ++LR   N  L Q+ +         +T   V+  +N+ +WGNHS + Y D    TVN
Sbjct:    4 PVRVAVTGAAGQIGYSLLFRIASGEMLGQNQPVILQLLDLPQAQNAVKGVMMELEDCAFPLLAGMVATDDPNVAFKDADICLLVGARPRSKGMERADLLEANGAIFTVQGKAIAENAKEDVKVLVVGNPANTNAYIARKAAEKVGRTNPANYTAMLRLDHNRALSQLAA---------KTGKAVASIENMAVWGNHSPTMYADYRFATVN 204          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_NOCSJ (Malate dehydrogenase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=mdh PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.447e-32
Identity = 90/226 (39.82%), Postives = 126/226 (55.75%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLSMSLSGLCIVEWRFITT 731
            M+  P++V VTGAA QIGY+L+  +A G +LG D+P+ L +L+I PA +AL GV MEL D AFP L GV    DA +   GVN+A++VG  PR  GM+R D++S N +I+ A   AL   AA + ++ V  NPAN        N       R   L ++   + I     +T   V+D K + IWGNHS++QYPDV    +    G N +  +     +E  FI T
Sbjct:    1 MSSTPLKVAVTGAAGQIGYSLLFRLASGSLLG-DRPIELRLLEITPALKALEGVVMELDDCAFPNLAGVQIGDDAEQIFDGVNLALLVGARPRGPGMERGDLLSANGAIFTAQGKALNKVAADDVRIGVTGNPANTNALIAMTNAPDIPQARFSALTRLDHNRAISQLAAKTGAAVTDIKKMTIWGNHSATQYPDVFHAEIG---GRNAAEVVGDQDWIESTFIPT 222          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_RUBXD (Malate dehydrogenase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=mdh PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.450e-32
Identity = 80/201 (39.80%), Postives = 111/201 (55.22%), Query Frame = 3
Query:   78 VLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDV 641
            V VTGAA  IGYA++  IA G MLG DQ + L +L+I PA +A  G  MEL D AFPLL+ VD T D  EA  G N+ +++G  PR++GM+R D++  N  I+K    A+  HAA + +VLVV NPAN             P   F    R   L  N  +  +    G+G         V D +++++WGNHS + +PD+
Sbjct:    5 VTVTGAAGAIGYAILFRIASGQMLGPDQKLRLKLLEIEPALKAAEGTAMELYDCAFPLLEAVDITADPKEAFDGANVCLLIGARPRQRGMERADLLEANGQIFKPQGRAINDHAADDVRVLVVGNPANTNCLIAMNNAPDVPRERFSAMTR---LDENRAVSMLAQKLGVG---------VEDVRDLVVWGNHSPTMFPDL 193          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_MYCVP (Malate dehydrogenase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mdh PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.450e-32
Identity = 81/208 (38.94%), Postives = 110/208 (52.88%), Query Frame = 3
Query:   69 PVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLL-------RNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATG 671
            PV V VTGAA  IGYA +  IA G MLG   PV L +L++P A  A  GV MEL D AFPLL G +   D   A  GV++A+++G  PR +GM+R D++  N  I+     AL   A+P+ +VLVV NPAN       N    S         R   L ++   + +      +  PV++   + IWGNHS +QYPD+    V   +G
Sbjct:    8 PVTVAVTGAAGHIGYAALFRIAAGAMLGHTTPVTLRLLELPDAVRAAEGVVMELEDGAFPLLAGTEIYDDPTRAFDGVDVALLIGARPRTKGMERADLLGANAEIFATSGKALNAGASPDVRVLVVGNPAN------TNALVASAHAPDIPADRFTALTRLDHNRAVAATARHSGVPVTEISRMTIWGNHSPTQYPDIFHAVVGGRSG 209          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_MYCLE (Malate dehydrogenase OS=Mycobacterium leprae GN=mdh PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.450e-32
Identity = 88/226 (38.94%), Postives = 126/226 (55.75%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLSMSLSGLCIVEWRFITT 731
            M+  P++V VTGAA QIGY+L+  +A G +LG D+P+ L +L+I PA +AL GV MEL D AF LL GV+   D  +   GVN+A++VG  PR  GM+R D++  N +I+ A   AL   AA + +V V  NPAN        N       R   L ++   + I     +T   V+D + + IWGNHS++QYPDV    +    G+N +  +     +E  FI T
Sbjct:    1 MSPRPLKVAVTGAAGQIGYSLLFRLASGSLLGLDRPIELRLLEIEPALKALEGVVMELDDCAFLLLAGVEIGADPNKVFDGVNLALLVGARPRGPGMERGDLLEANGAIFTAQGKALNAVAAADIRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAIAQLATKTGSAVTDIRKMTIWGNHSATQYPDVFHAEIG---GKNAAEVVGDQAWIEDYFIPT 223          
The following BLAST results are available for this feature:
BLAST of EY710868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MDH_MYCA11.098e-3238.94Malate dehydrogenase OS=Mycobacterium avium (strai... [more]
MDH_DESPS1.098e-3240.38Malate dehydrogenase OS=Desulfotalea psychrophila ... [more]
MDH_ARTAT1.098e-3238.74Malate dehydrogenase OS=Arthrobacter aurescens (st... [more]
MDH_XANOP1.434e-3242.31Malate dehydrogenase OS=Xanthomonas oryzae pv. ory... [more]
MDH_NITEU1.434e-3240.40Malate dehydrogenase OS=Nitrosomonas europaea GN=m... [more]
MDH_LARHH1.434e-3240.95Malate dehydrogenase OS=Laribacter hongkongensis (... [more]
MDH_NOCSJ2.447e-3239.82Malate dehydrogenase OS=Nocardioides sp. (strain B... [more]
MDH_RUBXD5.450e-3239.80Malate dehydrogenase OS=Rubrobacter xylanophilus (... [more]
MDH_MYCVP5.450e-3238.94Malate dehydrogenase OS=Mycobacterium vanbaalenii ... [more]
MDH_MYCLE5.450e-3238.94Malate dehydrogenase OS=Mycobacterium leprae GN=md... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710868 ID=EY710868; Name=EY710868; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGGAAAAATCTTTTCGTTTCCTGTGATACATCTCTGATCC
GAACTAATGGCCAAGGAACCAGTTCGCGTTCTCGTCACCGGCGCCGCAAG
GCAAATTGGATATGCACTTGTCCCCATGATTGCTAGGGGAGTGATGTTGG
GTACTGACCAGCCTGTGATTCTGCACATGCTTGATATCCCACCTGCAGCA
GAGGCATTGAATGGTGTGAAGATGGAGTTGGTTGATGCTGCATTCCCTCT
TCTTAAAGGTGTTGATGCTACAACTGATGCTGTTGAGGCATGCACTGGGG
TCAATATTGCCGTTATGGTTGGTGGCTTTCCAAGAAAACAAGGAATGGAT
AGAAAAGATGTGATGTCAAAGAACGTTTCAATCTACAAGGCTCATGCTTC
TGCCCTGGAGCATCACGCAGCTCCGAACTGCAAGGTTCTAGTTGTCGCTA
ACCCTGCAAACCCAATGCATTGATTCTGAAAGAATTTGCGCCATCAATCC
CTGCTAAGAAATTACATGCTTGACCAGATTGGATCATAACAGGGCATTGG
GACAAATATCTGAGAAACTGAATGTCCAGTATCTGATGCTAAGAATGTGA
TTATTTGGGGAAATCATTCATCATCTCAGTACCCTGATGTCAACCAGTGC
ACTGTCAATACTGCCACTGGGGAAAACCTGTCCATGAGCTTGTCAGGATT
ATGCATCGTTGAATGGAGATTCATAACCACAGCCAACAACGTGGTGCTGC
ATCATCAACTCCAAAAGCTCCCAAGGGTCTGCTGCTGCAATTCCGCTTTG
ACCTACCCGGATTGGGTTCTTGAACCCTTAGGACCTGGGCCCCAGGGGGT
TACCTGATGGTC
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