EY710868

Overview
NameEY710868
Unique NameEY710868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4)

HSP 1 Score: 154.836 bits (390), Expect = 5.627e-37
Identity = 92/207 (44.44%), Postives = 118/207 (57.00%), Query Frame = 3
Query:   66 EPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNYM----LDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGE 674
            EP+RVLVTGAA QI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A PLLK V AT     A   +++A++VG  PR+ GM+RKD++  NV I+K   +AL+ +A  + KV+VV NPAN                N+     LD   +   I   +  T     D KNVIIWGNHSS+QYPDVN   V     E
Sbjct:    3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTS---DDVKNVIIWGNHSSTQYPDVNHAKVKLQAKE 206          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_STRCO (Malate dehydrogenase OS=Streptomyces coelicolor GN=mdh PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.349e-37
Identity = 93/213 (43.66%), Postives = 119/213 (55.87%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            M + PV V VTGAA QIGYAL+  IA G +LG D PV L +L+I PA +A  G  MEL D AFPLL+G++ T D   A  G N+A++VG  PR +GM+R D++  N  I+K    A+  HAA + KVLVV NPAN             P   F    R   L  N  L Q+           +T   V+D K + IWGNHS++QYPD+   TV
Sbjct:    1 MTRTPVNVTVTGAAGQIGYALLFRIASGQLLGADVPVKLRLLEITPALKAAEGTAMELDDCAFPLLQGIEITDDPNVAFDGANVALLVGARPRTKGMERGDLLEANGGIFKPQGKAINDHAADDIKVLVVGNPANTNALIAQAAAPDVPAERFTAMTR---LDHNRALTQLAK---------KTGSTVADIKRLTIWGNHSATQYPDIFHATV 201          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_RALME (Malate dehydrogenase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=mdh PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.349e-37
Identity = 91/205 (44.39%), Postives = 119/205 (58.05%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F----*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            MAK P+RV VTGAA QIGY+L+  IA G MLG DQPVIL +LD+P A  A+ GV MEL D AFPLL GV  T D   A    ++A++VG  PR +GM+RKD++  N  I+     AL+  A+ + KVLVV NPAN           NL+ ++      LD   +   I     +T  PVS  + + +WGNHS + Y D    TV+
Sbjct:    1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLEANAQIFTVQGKALDEVASRDVKVLVVGNPANTNAYIAMKSAPNLKRENFTAMLRLDHNRALSQIAA---KTGKPVSSIEKMFVWGNHSPTMYADYRYATVD 202          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 7.349e-37
Identity = 91/201 (45.27%), Postives = 117/201 (58.21%), Query Frame = 3
Query:   66 EPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNYM----LDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            EP+RVLVTGAA QI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A PLLK V AT     A   +++A++VG  PR+ GM+RKD++  NV I+K   +AL+ +A  + KV+VV NPAN                N+     LD   +   I   +  T     D KNVIIWGNHSS+QYPDVN   V
Sbjct:    3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTS---DDVKNVIIWGNHSSTQYPDVNHAKV 200          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_BURP8 (Malate dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=mdh PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.254e-36
Identity = 98/222 (44.14%), Postives = 124/222 (55.86%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLS 683
            MAK   RV VTGAA QIGY+L+  IA G MLG DQPVIL +LD+P A  A+ GV MEL D AFPLL GV  T D   A    ++A++VG  PR +GM+RKD++S N  I+     AL   A+ + KVLVV NPAN             P   F   LR   L  N  L Q+ +  G          PVS  + +++WGNHS + YPD     V TA G++L+
Sbjct:    1 MAKPAKRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVVTDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLR---LDHNRALSQLAAKSG---------KPVSSIEKLVVWGNHSPTMYPDFR---VATAEGQDLT 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_BDEBA (Malate dehydrogenase OS=Bdellovibrio bacteriovorus GN=mdh PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.254e-36
Identity = 97/216 (44.91%), Postives = 122/216 (56.48%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANP----------MH*F*KNLRHQSLLR---NYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTA 665
            K PVRV VTGAA QIGYAL+  IA G MLG DQPVIL +L+IP   A +AL GV MEL D AFPLL  + AT D   A    ++A++VG  PR  GM+RKD+++ N  I+     A+  +A PN KVLVV NPAN            H   K     ++LR   N  L Q+ +         +T  PV+  K V +WGNHS + YPDV   T + A
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGAMLGADQPVILQLLEIPDEKAQKALKGVMMELEDCAFPLLHSMIATGDPAVAFKDADVALLVGARPRGPGMERKDLLTANGQIFTVQGEAIGKYANPNVKVLVVGNPANTNAYIAMKSAMKHGRVKAKNFTAMLRLDHNRALSQLAT---------KTGKPVASFKKVAVWGNHSPTMYPDVRFATADGA 208          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_HALHL (Malate dehydrogenase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mdh PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.637e-36
Identity = 85/199 (42.71%), Postives = 118/199 (59.30%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            K PVRV VTGAA QIGY+L+  IA G MLG DQPV L +L+IP A EAL G  MEL D AFPL+ G+ AT  A EA    +  ++VG  PR  GM+RKD++  N +I+ A   AL   A  + KVL V NPAN      +        RN+  + ++   + +     +  C  ++ + + +WGNHS++QYPD++ CT+
Sbjct:    2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVTLQLLEIPQAQEALQGTVMELEDCAFPLVDGIIATDSAEEAFRDADYVLLVGAKPRGPGMERKDLLEANAAIFSAQGQALNAVAKRDVKVLAVGNPANTNALITQRNAPDLDPRNFTAMTRLDHNRALAQLSNKVGCHSTEIRGLAVWGNHSATQYPDISHCTI 200          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC_FELCA (Malate dehydrogenase, cytoplasmic OS=Felis catus GN=MDH1 PE=2 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.637e-36
Identity = 94/210 (44.76%), Postives = 120/210 (57.14%), Query Frame = 3
Query:   66 EPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            EP+RVLVTGAA QI Y+L+  I  G + G DQP+IL +LDI P    L+GV MEL D A PLLK V AT     A   +++A++VG  PR+ GM+RKD++  NV I+K   +ALE +A  + KV+VV NPAN             P   F    R   L  N    QI    G+ ++         D KNVIIWGNHSS+QYPDV+   V
Sbjct:    3 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEDVAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALEKYAKKSVKVIVVGNPANTNCLTACKSAPSIPKENFSCLTR---LDHNRAKAQIALKLGVTSD---------DVKNVIIWGNHSSTQYPDVSHAKV 200          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.138e-36
Identity = 94/214 (43.93%), Postives = 120/214 (56.07%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            MAK PV V VTGAA QIGYAL+  IA G +LG D PV L +L+IP A +A  G  MEL D AFPLL GVD   D  +A  GVN+A++VG  PR +GM+R+D++  N  I+    +A+   AA + +VLVV NPAN             P   F    R   L  N  L Q+ +         +    VSD K + IWGNHS++QYPD+    VN
Sbjct:    1 MAKAPVNVTVTGAAGQIGYALLFRIASGQLLGVDTPVRLRLLEIPQAIKAAEGTAMELDDCAFPLLAGVDIYDDPRKAFDGVNVALLVGARPRTKGMERRDLLEANGGIFGPQGAAINDGAADDVRVLVVGNPANTNALIAQAHAPDIPADRFTAMTR---LDHNRALSQLAA---------KLNVSVSDIKKLTIWGNHSATQYPDIFHAEVN 202          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_RALPJ (Malate dehydrogenase OS=Ralstonia pickettii (strain 12J) GN=mdh PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.138e-36
Identity = 97/216 (44.91%), Postives = 123/216 (56.94%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            MAK P+RV VTGAA QIGYAL+  IA G MLG DQPVIL +L+IP   A +AL GV ME+ D AFPLL G+ A +D + A   V++A++VG  PR  GM+R D++S N  I+ A   AL   A+ N KVLVV NPAN             P   F   LR   L  N  L QI +         +T  PVS  + + +WGNHS + Y D    T++
Sbjct:    1 MAKAPMRVAVTGAAGQIGYALLFRIAAGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEIEDCAFPLLAGMQAHSDPMTAFKDVDVALLVGARPRGPGMERADLLSANAQIFTAQGRALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPRENFTAMLR---LDHNRALSQIAA---------KTGKPVSSIEKLFVWGNHSPTMYADYRYATID 204          
The following BLAST results are available for this feature:
BLAST of EY710868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MDHC_PIG5.627e-3744.44Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN... [more]
MDH_STRCO7.349e-3743.66Malate dehydrogenase OS=Streptomyces coelicolor GN... [more]
MDH_RALME7.349e-3744.39Malate dehydrogenase OS=Ralstonia metallidurans (s... [more]
MDHC_BOVIN7.349e-3745.27Malate dehydrogenase, cytoplasmic OS=Bos taurus GN... [more]
MDH_BURP81.254e-3644.14Malate dehydrogenase OS=Burkholderia phymatum (str... [more]
MDH_BDEBA1.254e-3644.91Malate dehydrogenase OS=Bdellovibrio bacteriovorus... [more]
MDH_HALHL1.637e-3642.71Malate dehydrogenase OS=Halorhodospira halophila (... [more]
MDHC_FELCA1.637e-3644.76Malate dehydrogenase, cytoplasmic OS=Felis catus G... [more]
MDH_THEFY2.138e-3643.93Malate dehydrogenase OS=Thermobifida fusca (strain... [more]
MDH_RALPJ2.138e-3644.91Malate dehydrogenase OS=Ralstonia pickettii (strai... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710868 ID=EY710868; Name=EY710868; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGGAAAAATCTTTTCGTTTCCTGTGATACATCTCTGATCC
GAACTAATGGCCAAGGAACCAGTTCGCGTTCTCGTCACCGGCGCCGCAAG
GCAAATTGGATATGCACTTGTCCCCATGATTGCTAGGGGAGTGATGTTGG
GTACTGACCAGCCTGTGATTCTGCACATGCTTGATATCCCACCTGCAGCA
GAGGCATTGAATGGTGTGAAGATGGAGTTGGTTGATGCTGCATTCCCTCT
TCTTAAAGGTGTTGATGCTACAACTGATGCTGTTGAGGCATGCACTGGGG
TCAATATTGCCGTTATGGTTGGTGGCTTTCCAAGAAAACAAGGAATGGAT
AGAAAAGATGTGATGTCAAAGAACGTTTCAATCTACAAGGCTCATGCTTC
TGCCCTGGAGCATCACGCAGCTCCGAACTGCAAGGTTCTAGTTGTCGCTA
ACCCTGCAAACCCAATGCATTGATTCTGAAAGAATTTGCGCCATCAATCC
CTGCTAAGAAATTACATGCTTGACCAGATTGGATCATAACAGGGCATTGG
GACAAATATCTGAGAAACTGAATGTCCAGTATCTGATGCTAAGAATGTGA
TTATTTGGGGAAATCATTCATCATCTCAGTACCCTGATGTCAACCAGTGC
ACTGTCAATACTGCCACTGGGGAAAACCTGTCCATGAGCTTGTCAGGATT
ATGCATCGTTGAATGGAGATTCATAACCACAGCCAACAACGTGGTGCTGC
ATCATCAACTCCAAAAGCTCCCAAGGGTCTGCTGCTGCAATTCCGCTTTG
ACCTACCCGGATTGGGTTCTTGAACCCTTAGGACCTGGGCCCCAGGGGGT
TACCTGATGGTC
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