EY710868

Overview
NameEY710868
Unique NameEY710868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_POLSQ (Malate dehydrogenase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=mdh PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.793e-36
Identity = 94/216 (43.52%), Postives = 124/216 (57.41%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            MAK P+RV VTGAA QIGY+L+  IA G +LG DQPVIL +L+IP   A +AL GV MEL D AFPLL G+ A +D + A   +++A++VG  PR  GM+RKD++S N  I+ A   AL   A    KVLVV NPAN             P   F   LR   L  N  L Q+ +         +   PV+D + +++WGNHS + YPD    T++
Sbjct:    1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALTGVMMELEDCAFPLLAGMTAHSDPMTAFKDIDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALNAVAKKTVKVLVVGNPANTNAYIAMKSAPDIPAKNFTAMLR---LDHNRALSQLAN---------KLNKPVADIEKLVVWGNHSPTMYPDYRFATID 204          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_CELJU (Malate dehydrogenase OS=Cellvibrio japonicus (strain Ueda107) GN=mdh PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.764e-36
Identity = 87/200 (43.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            K PVRV VTGAA QI Y+L+  IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPLL G+  T D   A    + A++VG  PR  GM+RKD+++ N +I+     A+  HA+ N KVLVV NPAN       +N    S  +   + ++   + +     +T   +++    +IWGNHSS+QYPD++   V+
Sbjct:    2 KAPVRVTVTGAAGQISYSLLFRIAAGDMLGKDQPVILQLLEITPALKALQGVAMELDDCAFPLLAGIVTTDDPSVAFKDSDYALLVGARPRGPGMERKDLLAANAAIFSVQGKAINDHASKNIKVLVVGNPANTNALIAQRNAPDISPRQFTAMTRLDHNRALSQLATKTGTSINNITKALIWGNHSSTQYPDLHNTLVD 201          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_STRAW (Malate dehydrogenase OS=Streptomyces avermitilis GN=mdh PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.222e-36
Identity = 91/213 (42.72%), Postives = 119/213 (55.87%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            M + PV V VTGAA QIGYAL+  IA G +LG D PV L +L+I PA +A  G  MEL D AFPLL+G+D T D   A  G N+ ++VG  PR +GM+R D++S N  I+K    A+  +AA + K+LVV NPAN             P   F    R   L  N  L Q+           +T   V+D K + IWGNHS++QYPD+   +V
Sbjct:    1 MTRTPVNVTVTGAAGQIGYALLFRIASGQLLGADVPVKLRLLEITPALKAAEGTAMELDDCAFPLLQGIDITDDPNVAFDGTNVGLLVGARPRTKGMERGDLLSANGGIFKPQGKAINDNAADDVKILVVGNPANTNALIAQAAAPDVPAERFTAMTR---LDHNRALTQLAK---------KTGSTVADIKRLTIWGNHSATQYPDIFHASV 201          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_POLNS (Malate dehydrogenase OS=Polynucleobacter necessarius (strain STIR1) GN=mdh PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.222e-36
Identity = 94/216 (43.52%), Postives = 124/216 (57.41%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            MAK P+RV VTGAA QIGY+L+  IA G +LG DQPVIL +L+IP   A +AL GV MEL D AFPLL G+ A +D + A   +++A++VG  PR  GM+RKD++S N  I+ A   AL   A    KVLVV NPAN             P   F   LR   L  N  L Q+ +         +   PV+D + +++WGNHS + YPD    T++
Sbjct:    1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALAGVMMELEDCAFPLLAGMTAHSDPMTAFKDIDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALNVVAKKTVKVLVVGNPANTNAYIAMKSAPDIPAKNFTAMLR---LDHNRALSQLAN---------KLNKPVADIEKLVVWGNHSPTMYPDYRFATID 204          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_STRGG (Malate dehydrogenase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=mdh PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.126e-36
Identity = 84/196 (42.86%), Postives = 115/196 (58.67%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNYM-LDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDV 641
            M + PV V VTGAA QIGYAL+  IA G +LG D PV L +L+IP   +A  G  MEL D AFPLL+G++ T D      G N+A++VG  PR +GM+R D+++ N  I+K    A+  HAA + KVLVV NPAN      +          +  + ++   + I     +T   VSD K + IWGNHS++QYPD+
Sbjct:    1 MTRTPVNVTVTGAAGQIGYALLFRIASGHLLGPDVPVNLRLLEIPQGLKAAEGTAMELDDCAFPLLRGIEITDDPNVGFAGANVALLVGARPRTKGMERGDLLAANGGIFKPQGKAINDHAADDIKVLVVGNPANTNALIAQAAAPDVPAERFTAMTRLDHNRAISQLAAKTGAAVSDIKKLTIWGNHSATQYPDI 196          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_SACEN (Malate dehydrogenase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=mdh PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.061e-35
Identity = 91/214 (42.52%), Postives = 118/214 (55.14%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            M + PV V VTGAA QIGYAL+  IA G ++G D PV L +L+IP A +A  G  MEL D AFPLL+G++ T DA  A  G N+A++VG  PR +GM+R D++  N  I+K    A+   AA + +VLVV NPAN             P   F    R   L  N  L Q+    G+  N         D K + IWGNHS++QYPD+    VN
Sbjct:    1 MTQAPVTVTVTGAAGQIGYALLFRIASGQLIGPDTPVRLRLLEIPQAVKAAEGTAMELDDCAFPLLQGIEVTDDARTAFDGTNVALLVGARPRTKGMERGDLLEANGGIFKPQGEAINAGAADDVRVLVVGNPANTNALIAQAHAPDVPAERFTAMTR---LDHNRALTQLAQKLGVSVN---------DIKKLTIWGNHSATQYPDLFHAEVN 202          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_FRASC (Malate dehydrogenase OS=Frankia sp. (strain CcI3) GN=mdh PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.061e-35
Identity = 91/218 (41.74%), Postives = 119/218 (54.59%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATG 671
            M+  PV V VTGAA QIGYAL+  IA G +LG D PV L +L+IP A  A  G  +EL D+AFPLL GVD   DA  A  G N+A++VG  PR +GM+R D++S N  I+K    A+   AA + +VLVV NPAN             P   F    R   L  N  + Q+    G+         P ++ K + IWGNHS++QYPD+    V   +G
Sbjct:    1 MSSTPVNVTVTGAAGQIGYALLFRIASGQLLGADTPVKLRLLEIPQAVRAAEGTALELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSANGGIFKPQGEAINSGAAEDIRVLVVGNPANTNALIAQTHAPDVPAERFTAMTR---LDHNRAIAQLAKKLGV---------PSAEIKKITIWGNHSATQYPDIFHAEVGGRSG 206          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_NITEC (Malate dehydrogenase OS=Nitrosomonas eutropha (strain C91) GN=mdh PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.364e-35
Identity = 91/217 (41.94%), Postives = 123/217 (56.68%), Query Frame = 3
Query:   69 PVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            PVR+ VTGAA QI Y+L+  IA G MLG++QPVIL +LDIP + + L+GV MEL D AFPLL G+ AT D + A    +IA++VG  PR++GM+RKD++  N  I++     L   A  + K+LVV NPAN             P   F   LR   L  N  L Q+           +   PVS+ K +I+WGNHSS+Q+PD+    +      NL
Sbjct:    4 PVRITVTGAAGQISYSLLFRIAAGDMLGSNQPVILQLLDIPESRKILDGVVMELQDCAFPLLAGIIATHDPMMAFDQTDIAILVGARPRRKGMERKDLLQTNGEIFRNQGKILNQVAKRDAKILVVGNPANTNTLITMKNAPDLPAENFSGMLR---LDHNRALSQVAM---------KLNQPVSNIKKMIVWGNHSSTQFPDLYHAEIGDTKVINL 208          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_FRAAA (Malate dehydrogenase OS=Frankia alni (strain ACN14a) GN=mdh PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.364e-35
Identity = 90/218 (41.28%), Postives = 119/218 (54.59%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATG 671
            M+  PV V VTGAA QIGYAL+  IA G +LG D PV L +L+IP A  A  G  +EL D+AFPLL GVD   DA  A  G N+A++VG  PR +GM+R D++S N  I+K    A+   AA + +VLVV NPAN             P   F    R   L  N  + Q+    G+         P ++ + + IWGNHS++QYPD+    V   +G
Sbjct:    1 MSSTPVNVTVTGAAGQIGYALLFRIASGQLLGADTPVRLRLLEIPQAVRAAEGTALELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSANGGIFKPQGEAINSGAAEDIRVLVVGNPANTNALIAQTHAPDVPAERFTAMTR---LDHNRAIAQLAKKLGV---------PSAEIRKITIWGNHSATQYPDIFHAQVGGRSG 206          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.088e-35
Identity = 87/199 (43.72%), Postives = 115/199 (57.79%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            K PVRV VTGAA QI Y+L+  IA G MLG DQPVIL ML+I PA EAL GV MEL D AFPLL  +  T DA  A    + A++VG  PR  GM+R D++  N +I+     A+  HA+   KVLVV NPAN      +        R +  + ++   +G+     + +  ++D   + IWGNHSS+QYPD+    V
Sbjct:    2 KAPVRVTVTGAAGQISYSLLFRIAAGEMLGADQPVILQMLEITPALEALKGVAMELDDCAFPLLHSMVCTDDANVAFKDSDYALLVGARPRGPGMERNDLLEANAAIFSVQGKAINDHASRGIKVLVVGNPANTNALIAQRNAPDIDPRQFTAMTRLDHNRGMSQLASKLDVSINDITKMTIWGNHSSTQYPDLYHALV 200          
The following BLAST results are available for this feature:
BLAST of EY710868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MDH_POLSQ2.793e-3643.52Malate dehydrogenase OS=Polynucleobacter sp. (stra... [more]
MDH_CELJU4.764e-3643.50Malate dehydrogenase OS=Cellvibrio japonicus (stra... [more]
MDH_STRAW6.222e-3642.72Malate dehydrogenase OS=Streptomyces avermitilis G... [more]
MDH_POLNS6.222e-3643.52Malate dehydrogenase OS=Polynucleobacter necessari... [more]
MDH_STRGG8.126e-3642.86Malate dehydrogenase OS=Streptomyces griseus subsp... [more]
MDH_SACEN1.061e-3542.52Malate dehydrogenase OS=Saccharopolyspora erythrae... [more]
MDH_FRASC1.061e-3541.74Malate dehydrogenase OS=Frankia sp. (strain CcI3) ... [more]
MDH_NITEC2.364e-3541.94Malate dehydrogenase OS=Nitrosomonas eutropha (str... [more]
MDH_FRAAA2.364e-3541.28Malate dehydrogenase OS=Frankia alni (strain ACN14... [more]
MDH_TERTT3.088e-3543.72Malate dehydrogenase OS=Teredinibacter turnerae (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710868 ID=EY710868; Name=EY710868; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGGAAAAATCTTTTCGTTTCCTGTGATACATCTCTGATCC
GAACTAATGGCCAAGGAACCAGTTCGCGTTCTCGTCACCGGCGCCGCAAG
GCAAATTGGATATGCACTTGTCCCCATGATTGCTAGGGGAGTGATGTTGG
GTACTGACCAGCCTGTGATTCTGCACATGCTTGATATCCCACCTGCAGCA
GAGGCATTGAATGGTGTGAAGATGGAGTTGGTTGATGCTGCATTCCCTCT
TCTTAAAGGTGTTGATGCTACAACTGATGCTGTTGAGGCATGCACTGGGG
TCAATATTGCCGTTATGGTTGGTGGCTTTCCAAGAAAACAAGGAATGGAT
AGAAAAGATGTGATGTCAAAGAACGTTTCAATCTACAAGGCTCATGCTTC
TGCCCTGGAGCATCACGCAGCTCCGAACTGCAAGGTTCTAGTTGTCGCTA
ACCCTGCAAACCCAATGCATTGATTCTGAAAGAATTTGCGCCATCAATCC
CTGCTAAGAAATTACATGCTTGACCAGATTGGATCATAACAGGGCATTGG
GACAAATATCTGAGAAACTGAATGTCCAGTATCTGATGCTAAGAATGTGA
TTATTTGGGGAAATCATTCATCATCTCAGTACCCTGATGTCAACCAGTGC
ACTGTCAATACTGCCACTGGGGAAAACCTGTCCATGAGCTTGTCAGGATT
ATGCATCGTTGAATGGAGATTCATAACCACAGCCAACAACGTGGTGCTGC
ATCATCAACTCCAAAAGCTCCCAAGGGTCTGCTGCTGCAATTCCGCTTTG
ACCTACCCGGATTGGGTTCTTGAACCCTTAGGACCTGGGCCCCAGGGGGT
TACCTGATGGTC
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