EY710868

Overview
NameEY710868
Unique NameEY710868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_DELAS (Malate dehydrogenase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=mdh PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.033e-35
Identity = 97/228 (42.54%), Postives = 126/228 (55.26%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLSMSLS 695
            M+K+PVRV VTGAA QIGYAL+  IA G MLG DQPVIL +L+IP   A  AL GV MEL D AFPLL G++A +D ++A    + A++VG  PR  GM+R D+++ N  I+ A   AL   A+ N KVLVV NPAN             P   F   LR   L  N    Q+ +  G           V D + + +WGNHS + Y D    TVN   GE++   ++
Sbjct:    1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPLQAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRAASQLAAKAGF---------KVGDIRKLTVWGNHSPTMYADYRFATVN---GESVKAKIN 213          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_COXBU (Malate dehydrogenase OS=Coxiella burnetii GN=mdh PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.033e-35
Identity = 89/202 (44.06%), Postives = 117/202 (57.92%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            MAK  V+V VTGAA QIGYAL+  +A G   G D  V LH+L+I PA  AL GV MEL D AFPLL+ +  T+D   A   VN A++VG  PRK GM+RKD++ KN SI+     A+  +AA + ++ VV NP N        N       R Y + ++   + IG    +    V   KN+IIWGNHSS+QYPD    T++
Sbjct:    1 MAKH-VKVAVTGAAGQIGYALLFRLASGQAFGLDTTVDLHLLEIEPALPALKGVVMELEDCAFPLLRNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKNGSIFAGQGKAINENAASDVRIFVVGNPCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATID 201          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_COXBR (Malate dehydrogenase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=mdh PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.033e-35
Identity = 89/202 (44.06%), Postives = 117/202 (57.92%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            MAK  V+V VTGAA QIGYAL+  +A G   G D  V LH+L+I PA  AL GV MEL D AFPLL+ +  T+D   A   VN A++VG  PRK GM+RKD++ KN SI+     A+  +AA + ++ VV NP N        N       R Y + ++   + IG    +    V   KN+IIWGNHSS+QYPD    T++
Sbjct:    1 MAKH-VKVAVTGAAGQIGYALLFRLASGQAFGLDTTVDLHLLEIEPALPALKGVVMELEDCAFPLLRNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKNGSIFAGQGKAINENAASDVRIFVVGNPCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATID 201          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_COXB2 (Malate dehydrogenase OS=Coxiella burnetii (strain CbuG_Q212) GN=mdh PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.033e-35
Identity = 89/202 (44.06%), Postives = 117/202 (57.92%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            MAK  V+V VTGAA QIGYAL+  +A G   G D  V LH+L+I PA  AL GV MEL D AFPLL+ +  T+D   A   VN A++VG  PRK GM+RKD++ KN SI+     A+  +AA + ++ VV NP N        N       R Y + ++   + IG    +    V   KN+IIWGNHSS+QYPD    T++
Sbjct:    1 MAKH-VKVAVTGAAGQIGYALLFRLASGQAFGLDTTVDLHLLEIEPALPALKGVVMELEDCAFPLLRNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKNGSIFAGQGKAINENAASDVRIFVVGNPCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATID 201          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_COXB1 (Malate dehydrogenase OS=Coxiella burnetii (strain CbuK_Q154) GN=mdh PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.033e-35
Identity = 89/202 (44.06%), Postives = 117/202 (57.92%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            MAK  V+V VTGAA QIGYAL+  +A G   G D  V LH+L+I PA  AL GV MEL D AFPLL+ +  T+D   A   VN A++VG  PRK GM+RKD++ KN SI+     A+  +AA + ++ VV NP N        N       R Y + ++   + IG    +    V   KN+IIWGNHSS+QYPD    T++
Sbjct:    1 MAKH-VKVAVTGAAGQIGYALLFRLASGQAFGLDTTVDLHLLEIEPALPALKGVVMELEDCAFPLLRNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKNGSIFAGQGKAINENAASDVRIFVVGNPCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATID 201          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHC_XENLA (Malate dehydrogenase, cytoplasmic OS=Xenopus laevis GN=mdh1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.033e-35
Identity = 86/198 (43.43%), Postives = 118/198 (59.60%), Query Frame = 3
Query:   66 EPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNYM-LDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            EPV+VLVTGAA QI Y+L+  IA+G + G DQP+IL +LDI P    L GV MEL D A PLLK V AT     A   +++A++VG  PR++GM+RKD++  NV I+K+  +AL  ++  + KV+VV NPAN                N+  L ++   +       +      D KNVIIWGNHSS+QYPD +  +V
Sbjct:    3 EPVKVLVTGAAGQIAYSLLFGIAKGDVFGKDQPLILVLLDITPMMTVLEGVVMELQDCALPLLKEVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALNKYSKKSVKVIVVGNPANTNCLTALKSAPSIPKENFSCLTRLDHNRAKAQIALKLNVASDDVKNVIIWGNHSSTQYPDASHASV 200          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_STRMK (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=mdh PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.879e-35
Identity = 91/208 (43.75%), Postives = 122/208 (58.65%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F----*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTAT 668
            K PVRV VTGAA QIGYAL+  IA G MLG DQPVIL +L++P   A  AL GV MEL D AFPLL G+  T DA  A    +IA++VG  PR  GM+RKD++ +N  I+ A  +AL   A+ + KVLVV NPAN           +L+ ++      LD   +   + T + +   PV   + +++WGNHS + YPD    T + A+
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPVDKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDADIALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVASRDVKVLVVGNPANTNAYIAMKSAPDLKPENFTAMLRLDHNRALSQLSTKLGK---PVGGMEKLVVWGNHSPTMYPDYRFATADGAS 206          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.879e-35
Identity = 85/194 (43.81%), Postives = 115/194 (59.28%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F*KNLRHQSLLRNY-MLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDV 641
            K PVRV VTGAA QI Y+L+  IA G MLG DQPVIL ML+I PA EAL GV MEL D AFPLL G+  + D   A    + A++VG  PR  GM+RKD++  N +I+     A+  HA+ + KVLVV NPAN      +        R +  + ++   +G+     + +  + D   + IWGNHS++QYPD+
Sbjct:    2 KAPVRVAVTGAAGQISYSLLFRIAAGEMLGKDQPVILQMLEITPALEALKGVAMELDDCAFPLLAGMVCSDDPNVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSVQGKAINDHASRDIKVLVVGNPANTNALIAQRNAPDINPRQFTAMMRLDHNRGLSQLAAKLDVTLEDITKMTIWGNHSATQYPDL 195          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_METPP (Malate dehydrogenase OS=Methylibium petroleiphilum (strain PM1) GN=mdh PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.879e-35
Identity = 97/223 (43.50%), Postives = 127/223 (56.95%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            M+K+PVRV VTGAA QIGYAL+  IA G MLG DQPVIL +L+IP   A +AL GV MEL D AFPLL G++A  D + A    + A++VG  PR  GM+R +++S N +I+ A   AL   A+ N KVLVV NPAN             P   F   LR   L  N    QI +         +T  PVS  K + +WGNHS + Y D    T++ A+ +++
Sbjct:    1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMELEDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLSINGAIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKAAPDLPRKNFTAMLR---LDHNRAASQIAA---------KTGKPVSSIKQLAVWGNHSPTMYADYRFATIDGASVKDM 211          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH1_RHOFD (Malate dehydrogenase 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh1 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.879e-35
Identity = 93/216 (43.06%), Postives = 125/216 (57.87%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            M+K+PVRV VTGAA QIGYA++  IA G MLG DQPVIL +L++P   A +AL GV MEL D AFPLL G++A +D + A   V+ A+++G  PR  GM+R ++++ N +I+ A   AL   A+ N KVLVV NPAN             P   F   LR   L  N  L Q+ S         +T   V+D + + +WGNHS + Y D    T+N
Sbjct:    1 MSKKPVRVAVTGAAGQIGYAILFRIASGEMLGKDQPVILQLLEVPVEKAQQALQGVMMELQDCAFPLLAGMEAHSDPMTAFKDVDYALLIGSRPRGPGMERAELLAVNGAIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRALSQLAS---------KTGKAVADIEKMAVWGNHSPTMYADYRFATIN 204          
The following BLAST results are available for this feature:
BLAST of EY710868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MDH_DELAS4.033e-3542.54Malate dehydrogenase OS=Delftia acidovorans (strai... [more]
MDH_COXBU4.033e-3544.06Malate dehydrogenase OS=Coxiella burnetii GN=mdh P... [more]
MDH_COXBR4.033e-3544.06Malate dehydrogenase OS=Coxiella burnetii (strain ... [more]
MDH_COXB24.033e-3544.06Malate dehydrogenase OS=Coxiella burnetii (strain ... [more]
MDH_COXB14.033e-3544.06Malate dehydrogenase OS=Coxiella burnetii (strain ... [more]
MDHC_XENLA4.033e-3543.43Malate dehydrogenase, cytoplasmic OS=Xenopus laevi... [more]
MDH_STRMK6.879e-3543.75Malate dehydrogenase OS=Stenotrophomonas maltophil... [more]
MDH_SACD26.879e-3543.81Malate dehydrogenase OS=Saccharophagus degradans (... [more]
MDH_METPP6.879e-3543.50Malate dehydrogenase OS=Methylibium petroleiphilum... [more]
MDH1_RHOFD6.879e-3543.06Malate dehydrogenase 1 OS=Rhodoferax ferrireducens... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710868 ID=EY710868; Name=EY710868; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGGAAAAATCTTTTCGTTTCCTGTGATACATCTCTGATCC
GAACTAATGGCCAAGGAACCAGTTCGCGTTCTCGTCACCGGCGCCGCAAG
GCAAATTGGATATGCACTTGTCCCCATGATTGCTAGGGGAGTGATGTTGG
GTACTGACCAGCCTGTGATTCTGCACATGCTTGATATCCCACCTGCAGCA
GAGGCATTGAATGGTGTGAAGATGGAGTTGGTTGATGCTGCATTCCCTCT
TCTTAAAGGTGTTGATGCTACAACTGATGCTGTTGAGGCATGCACTGGGG
TCAATATTGCCGTTATGGTTGGTGGCTTTCCAAGAAAACAAGGAATGGAT
AGAAAAGATGTGATGTCAAAGAACGTTTCAATCTACAAGGCTCATGCTTC
TGCCCTGGAGCATCACGCAGCTCCGAACTGCAAGGTTCTAGTTGTCGCTA
ACCCTGCAAACCCAATGCATTGATTCTGAAAGAATTTGCGCCATCAATCC
CTGCTAAGAAATTACATGCTTGACCAGATTGGATCATAACAGGGCATTGG
GACAAATATCTGAGAAACTGAATGTCCAGTATCTGATGCTAAGAATGTGA
TTATTTGGGGAAATCATTCATCATCTCAGTACCCTGATGTCAACCAGTGC
ACTGTCAATACTGCCACTGGGGAAAACCTGTCCATGAGCTTGTCAGGATT
ATGCATCGTTGAATGGAGATTCATAACCACAGCCAACAACGTGGTGCTGC
ATCATCAACTCCAAAAGCTCCCAAGGGTCTGCTGCTGCAATTCCGCTTTG
ACCTACCCGGATTGGGTTCTTGAACCCTTAGGACCTGGGCCCCAGGGGGT
TACCTGATGGTC
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