EY710868

Overview
NameEY710868
Unique NameEY710868
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_HERAR (Malate dehydrogenase OS=Herminiimonas arsenicoxydans GN=mdh PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.984e-35
Identity = 95/216 (43.98%), Postives = 122/216 (56.48%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            MAK P+RV VTGAA QIGY+L+  IA G +LG DQPVIL +L+I    A  AL GV ME+ D AFPLL GV A +D + A   V+IA++VG  PR  GM+RKD++  N  I+     AL+  A+ N KVLVV NPAN             P   F   LR   L  N  L QI +         +T  PV+  + + +WGNHS + YPD    T++
Sbjct:    1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIDNEKAQNALKGVIMEIDDCAFPLLAGVSAHSDPMTAFKDVDIALLVGARPRGPGMERKDLLEANAQIFTVQGKALDAVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLR---LDHNRALSQIAA---------KTGKPVTAIEKLTVWGNHSPTMYPDYRFATID 204          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_LEPCP (Malate dehydrogenase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=mdh PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.173e-34
Identity = 94/215 (43.72%), Postives = 120/215 (55.81%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            M+K PVRV VTGAA QIGYAL+  IA G MLG DQPVIL +L++P   A EAL GV MEL D AFPLL G++A +D + A    + A++VG  PR  GM+R D+++ N  I+ A   AL   A+ N KVLVV NPAN             P   F   LR   L  N    QI +         +T  PV+  + + +WGNHS + Y D    T+
Sbjct:    1 MSKSPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPVEKAQEALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRAASQIAA---------KTGKPVASIEKLAVWGNHSPTMYADYRFATI 203          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_AZOSE (Malate dehydrogenase OS=Azoarcus sp. (strain EbN1) GN=mdh PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.173e-34
Identity = 91/214 (42.52%), Postives = 118/214 (55.14%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-----------PMH*F*KNLRHQSLL--RNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            M+K PVRV VTGAA QIGY+L+  IA G MLG DQPVIL +LD+P A +A+ GV MEL D AFPLL G+ AT D   A    +  ++VG  PR  GM+R D+++ N +I+     A+  +A  N KVLVV NP N            +     N  H  L    N  L Q+ +         +T  PVS  K +++WGNHS + Y D   CT N
Sbjct:    1 MSKAPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLDLPQAQKAVKGVMMELEDCAFPLLAGMVATDDPNVAFKDADYCLLVGARPRGPGMERADLLTANGAIFTVQGKAIAENANENVKVLVVGNPCNTNAYIAGAAARKVGRTNPNNYHGMLRLDHNRALSQLAA---------KTGRPVSSLKKMVVWGNHSPTMYADYRFCTSN 205          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_BURXL (Malate dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=mdh PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.532e-34
Identity = 95/222 (42.79%), Postives = 122/222 (54.95%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLS 683
            MAK   RV VTGAA QI Y+L+  IA G +LG DQPVIL +LD+P A  A+ GV MEL D AFPLL GV  T D   A    ++A++VG  PR +GM+RKD++S N  I+     AL   A+ + KVLVV NPAN             P   F   LR   L  N  L Q+ +  G          PV+  + + +WGNHS + YPD     V TA G++L+
Sbjct:    1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLSGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLR---LDHNRALSQLAAKSG---------KPVASIEKLAVWGNHSPTMYPDFR---VATAEGQDLT 207          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDHB_DICDI (Probable malate dehydrogenase 2, mitochondrial OS=Dictyostelium discoideum GN=mdhB PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.532e-34
Identity = 90/225 (40.00%), Postives = 128/225 (56.89%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHA-APNCKVLVVANPANPMH*F-*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENLSMSLSGLCIVEWRFITT 731
            K PVRV +TGA+ QIGY L+  IA G MLG DQP+IL  L++P A  +L GV MEL D AFPLLKG+  +    EA  G + A++VG  PR +GM+R D++  N  I+     AL+  A     +VLVV NPAN       +N  +    R   + ++   +G+     +T   V+D +   IWGNHS++QYPD+N     T  G++L  +++    V+  FI T
Sbjct:   22 KAPVRVAITGASGQIGYQLLFRIASGDMLGKDQPIILQCLELPGAMNSLKGVSMELDDCAFPLLKGIVQSDKPEEAFAGADYALLVGARPRSKGMERGDLLKANAEIFSVQGKALDKSANRDTLRVLVVGNPANTNALIAARNAPNIDPKRFSAMTRLDHNRGLAQLADKTGSAVTDIEKFCIWGNHSATQYPDIN---FGTVKGKSLVDTINDQKWVKDNFIPT 243          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_BORPD (Malate dehydrogenase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=mdh PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.001e-34
Identity = 96/215 (44.65%), Postives = 121/215 (56.28%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTV 656
            M+K  +RV VTGAA QIGYAL+  IA G MLG DQPVIL +L+IP   A +AL GV MEL D AFPLL+ V A +D   A    ++A++VG  PR  GM+RKD++S N  I+ A   AL   A+ N KVLVV NPAN             P   F   LR   L  N  L Q+ +  G           V+D + +++WGNHS + YPD    TV
Sbjct:    1 MSKPAMRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELDDCAFPLLQEVTAHSDPRTAFKDADVALLVGARPRGPGMERKDLLSVNAQIFTAQGKALNDVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRALSQLAAKSGKA---------VADIEKLVVWGNHSPTMYPDYRFATV 203          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH2_BURVG (Malate dehydrogenase 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh2 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.001e-34
Identity = 94/221 (42.53%), Postives = 122/221 (55.20%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            MAK   RV VTGAA QI Y+L+  IA G +LG DQPVIL +LD+P A  A+ GV MEL D AFPLL GV  T D   A    ++A++VG  PR +GM+RKD++S N  I+    +AL   A+ + KVLVV NPAN             P   F   LR   L  N  L Q+ +         +T  PV+  + + +WGNHS + YPD       TA GE++
Sbjct:    1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLR---LDHNRALSQLAA---------KTGKPVASIEKLAVWGNHSPTMYPDFR---FATAEGESM 206          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_STRM5 (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=mdh PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34
Identity = 90/208 (43.27%), Postives = 121/208 (58.17%), Query Frame = 3
Query:   63 KEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPANPMH*F----*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTAT 668
            K PVRV VTGAA QIGYAL+  IA G MLG DQPVIL +L++P   A  AL GV MEL D AFPLL G+  T DA  A    +IA++VG  PR  GM+RKD++ +N  I+ A  +AL   A+ + KVLVV NPAN           +L+ ++      LD   +   +   + +   PV   + +++WGNHS + YPD    T + A+
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPVDKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDADIALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVASRDVKVLVVGNPANTNAYIAMKSAPDLKPENFTAMLRLDHNRALSQLSAKLGK---PVGGMEKLVVWGNHSPTMYPDYRFATADGAS 206          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_DIAST (Malate dehydrogenase OS=Diaphorobacter sp. (strain TPSY) GN=mdh PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34
Identity = 95/216 (43.98%), Postives = 119/216 (55.09%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVN 659
            M+K+PVRV VTGAA QIGYAL+  IA G MLG DQPVIL +L+IP   A  AL GV MEL D AFPLL G++A +D + A    + A++VG  PR  GM+R D+++ N  I+ A   AL   A+ N KVLVV NPAN             P   F   LR   L  N    Q+ +  G           V D K + +WGNHS + Y D    TV+
Sbjct:    1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLR---LDHNRAASQLAAKGGF---------KVGDIKKLTVWGNHSPTMYADYRFATVD 204          
BLAST of EY710868 vs. ExPASy Swiss-Prot
Match: MDH_BURS3 (Malate dehydrogenase OS=Burkholderia sp. (strain 383) GN=mdh PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.614e-34
Identity = 95/221 (42.99%), Postives = 121/221 (54.75%), Query Frame = 3
Query:   57 MAKEPVRVLVTGAARQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVDATTDAVEACTGVNIAVMVGGFPRKQGMDRKDVMSKNVSIYKAHASALEHHAAPNCKVLVVANPAN-------------PMH*F*KNLRHQSLLRNYMLDQIGS*QGIGTNI*ETECPVSDAKNVIIWGNHSSSQYPDVNQCTVNTATGENL 680
            MAK   RV VTGAA QI Y+L+  IA G +LG DQPVIL +LD+P A  A+ GV MEL D AFPLL GV  T D   A    ++A++VG  PR +GM+RKD++S N  I+    +AL   A+ + KVLVV NPAN             P   F   LR   L  N  L Q+ +  G          PV+  + + +WGNHS + YPD       TA GE+L
Sbjct:    1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLSGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLR---LDHNRALSQLAAKSG---------KPVASIEKLAVWGNHSPTMYPDFR---FATAEGESL 206          
The following BLAST results are available for this feature:
BLAST of EY710868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MDH_HERAR8.984e-3543.98Malate dehydrogenase OS=Herminiimonas arsenicoxyda... [more]
MDH_LEPCP1.173e-3443.72Malate dehydrogenase OS=Leptothrix cholodnii (stra... [more]
MDH_AZOSE1.173e-3442.52Malate dehydrogenase OS=Azoarcus sp. (strain EbN1)... [more]
MDH_BURXL1.532e-3442.79Malate dehydrogenase OS=Burkholderia xenovorans (s... [more]
MDHB_DICDI1.532e-3440.00Probable malate dehydrogenase 2, mitochondrial OS=... [more]
MDH_BORPD2.001e-3444.65Malate dehydrogenase OS=Bordetella petrii (strain ... [more]
MDH2_BURVG2.001e-3442.53Malate dehydrogenase 2 OS=Burkholderia vietnamiens... [more]
MDH_STRM52.614e-3443.27Malate dehydrogenase OS=Stenotrophomonas maltophil... [more]
MDH_DIAST2.614e-3443.98Malate dehydrogenase OS=Diaphorobacter sp. (strain... [more]
MDH_BURS32.614e-3442.99Malate dehydrogenase OS=Burkholderia sp. (strain 3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710868 ID=EY710868; Name=EY710868; organism=Citrus sinensis; type=EST; length=862bp
CCACGCGTCCGGGAAAAATCTTTTCGTTTCCTGTGATACATCTCTGATCC
GAACTAATGGCCAAGGAACCAGTTCGCGTTCTCGTCACCGGCGCCGCAAG
GCAAATTGGATATGCACTTGTCCCCATGATTGCTAGGGGAGTGATGTTGG
GTACTGACCAGCCTGTGATTCTGCACATGCTTGATATCCCACCTGCAGCA
GAGGCATTGAATGGTGTGAAGATGGAGTTGGTTGATGCTGCATTCCCTCT
TCTTAAAGGTGTTGATGCTACAACTGATGCTGTTGAGGCATGCACTGGGG
TCAATATTGCCGTTATGGTTGGTGGCTTTCCAAGAAAACAAGGAATGGAT
AGAAAAGATGTGATGTCAAAGAACGTTTCAATCTACAAGGCTCATGCTTC
TGCCCTGGAGCATCACGCAGCTCCGAACTGCAAGGTTCTAGTTGTCGCTA
ACCCTGCAAACCCAATGCATTGATTCTGAAAGAATTTGCGCCATCAATCC
CTGCTAAGAAATTACATGCTTGACCAGATTGGATCATAACAGGGCATTGG
GACAAATATCTGAGAAACTGAATGTCCAGTATCTGATGCTAAGAATGTGA
TTATTTGGGGAAATCATTCATCATCTCAGTACCCTGATGTCAACCAGTGC
ACTGTCAATACTGCCACTGGGGAAAACCTGTCCATGAGCTTGTCAGGATT
ATGCATCGTTGAATGGAGATTCATAACCACAGCCAACAACGTGGTGCTGC
ATCATCAACTCCAAAAGCTCCCAAGGGTCTGCTGCTGCAATTCCGCTTTG
ACCTACCCGGATTGGGTTCTTGAACCCTTAGGACCTGGGCCCCAGGGGGT
TACCTGATGGTC
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