EY710866

Overview
NameEY710866
Unique NameEY710866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.370e-68
Identity = 124/242 (51.24%), Postives = 173/242 (71.49%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            GDN++++S  + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPVGRVETG LK G VV F P+       +   VKS+EMHHE LQEALPGDN+GFNV+ V+  D+KRG VA ++   P   R    F +Q+I++NHP  I  GY+PVL  HT+ I V+F +++ K+D R+G  +E+ P+F+K GD+ +V + P KP+V+E   + P LGRFA+RDM  T+A G++ S++K
Sbjct:  185 GDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHTDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGDSAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQK 426          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.370e-68
Identity = 122/228 (53.51%), Postives = 167/228 (73.25%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGV 718
            GDN+  +S N  WYKG TL++ALD++  P++P D PLR+P+QDVY I G+GTVPVGRVETGVLK G  V F P+G++  VKS+EMHHE +++A PGDN+GFNV+ V   D++RG VA +  D+P + A  FT+Q++++ HPG I  GY PV  CHT+ +A  F ELV K++  +G+  E+ P FLK G+A +VK+ PTKP+V+E   D P +GRFA+RDM QTVA G+
Sbjct:  179 GDNITSKSENTPWYKGKTLVEALDDLEAPEKPVDLPLRIPIQDVYSITGVGTVPVGRVETGVLKKGENVIFEPAGVSGEVKSIEMHHEMIEQAEPGDNIGFNVRGVGKNDIRRGDVAGH-LDNPPKVAKEFTAQIVVLQHPGVITVGYTPVFHCHTAQVACTFLELVQKMNPATGQVEEENPDFLKTGNAAVVKVKPTKPLVIEKIKDIPHMGRFAIRDMGQTVAAGM 405          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.370e-68
Identity = 127/246 (51.63%), Postives = 169/246 (68.70%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*-------VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAA---NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 742
            GDN++E+S N  WY GPTLL+ALDN+  P++P+DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G  V F P+   T        V+S+EMHHE ++ A PGDN+GFNVK V   D+ RG VA +  D+PA        F +Q++++ HP  I  GY PV  CHT+ +A KF EL+ KID  +G+ +E+ P FLK G+A  V++ PTKPMV+E     P LGRFA+RDM QTVA G+   +EK++
Sbjct:  179 GDNVVEKSDNTPWYDGPTLLEALDNLEPPEKPTDKPLRIPIQDVYSITGVGTVPVGRVETGVLEVGDTVRFEPAYTATGGRKGEGEVRSIEMHHEEIERAEPGDNIGFNVKGVGKNDISRGDVACHP-DEPATVVTPDDTFIAQIVVLQHPSAITAGYTPVFHCHTAQVACKFEELIEKIDPATGEVIEENPDFLKTGEAAKVRIRPTKPMVIEEVSFIPQLGRFAIRDMGQTVAAGMCVKIEKEE 423          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_METHJ (Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=tuf PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.370e-68
Identity = 122/235 (51.91%), Postives = 165/235 (70.21%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEKK 739
            GDN+ + S  + WYKG TL   LD +  P +P++KPLR+P+QD Y I GIGTVPVGRVETG+LK GM VTF P+  +  VKS+EMHHE + +A+PGDN+GFNV+ +   D++RG V   S D+P   A  FT+Q++++ HP  I  GY PV  CHT+  A  F+ELV K+D R+G+ LE+ P FLK GDA ++K  PTKP+ +E   ++P LGRFA+RDM QT+A G+  +V KK
Sbjct:  189 GDNITKNSDKMPWYKGKTLFGLLDELEVPDKPTEKPLRVPIQDAYSISGIGTVPVGRVETGILKKGMNVTFMPANKSGEVKSIEMHHEEIPQAVPGDNIGFNVRGIGKDDVRRGDVCGAS-DNPPAVAEEFTAQIVVLQHPSAITVGYTPVFHCHTAQTACTFTELVKKLDPRTGQTLEENPTFLKAGDAAIIKCHPTKPLCLENAKEFPQLGRFAIRDMGQTIAAGMCINVVKK 422          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 3.096e-68
Identity = 121/229 (52.84%), Postives = 167/229 (72.93%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVI 721
            GDN+ ++S    WY GPTLL+A D +  P++  DKPLR+P+QDVY I G+GTVPVGRVE+GVL+ G  V F P+G++  VKS+EMHHE +QEA PGDN+GFNV+ V+ KD++RG VA +  D+P     +FT+Q++++ HP  I  GY PV+  HT+ IA +F EL  KID R+G+  E+ P+FLK GDA +VK+ PT+PMV+E   D PP+GRFA+RDM  T+  G++
Sbjct:  189 GDNVAKKSDKTPWYNGPTLLEAFDLLKPPEKLVDKPLRIPIQDVYSISGVGTVPVGRVESGVLRVGDKVVFEPAGVSGEVKSIEMHHEPIQEAYPGDNIGFNVRGVSKKDIRRGDVAGH-PDNPPTVVKDFTAQLVVLQHPTAITVGYTPVVHAHTAQIACRFVELQKKIDPRTGQVKEENPQFLKTGDAAIVKLEPTRPMVIERVKDIPPMGRFAIRDMGMTIGAGMV 416          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 4.043e-68
Identity = 125/242 (51.65%), Postives = 171/242 (70.66%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            GDN++++S  + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPVGRVETG LK G VV F P+       +   VKS+EMHHE LQEALPGDN+GFNV+ V+  D+KRG VA +    P   R    F +Q+I++NHP  I  GY+PVL  HT+ + V+F +L+ KID R+G   E+ P+F+K GD+ +V + P KP+V+E   + P LGRFA+RDM  T+A G++ S++K
Sbjct:  185 GDNIVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHPDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKIDPRTGNITEENPQFIKTGDSAIVVLRPMKPVVLEPVKELPQLGRFAIRDMGMTIAAGMVISIQK 426          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 1.536e-67
Identity = 125/235 (53.19%), Postives = 164/235 (69.79%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEKK 739
            GDN+ + S N+ WYKGPTLL ALD    P++P +KPLR+P++DVY I GIGTVPVGRVETGVLKPG  V F P+     VKS+EMHHE LQ+A PGDN+GFNV+ +A  D+KRG V  +  D P      FT+Q+I++NHP  I  GY PV   HT+ +A +  E+V  ++ + G  L+++P F+KNGD  +VK+IP KP+V+E   + P LGRFAVRDM QTVA G    +EK+
Sbjct:  191 GDNVTKPSPNMPWYKGPTLLQALDAFKVPEKPINKPLRIPVEDVYSITGIGTVPVGRVETGVLKPGDKVIFLPADKQGDVKSIEMHHEPLQQAEPGDNIGFNVRGIAKNDIKRGDVCGH-LDTPPTVVKAFTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRIDEIVKTLNPKDGTTLKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3)

HSP 1 Score: 256.144 bits (653), Expect = 2.007e-67
Identity = 121/233 (51.93%), Postives = 166/233 (71.24%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVE 733
            GDN+  RS N+ WY GPTL + LD +  P +P DKPLR+P+QDVY I G+GTVPVGRVE+GVLK G  + F P+G    V+S+E HH  + +A PGDN+GFNV+ V  KD+KRG V  +  ++P   A  FT+++I++ HP  + NGY PV+  HT+ +A + SELV+K+D R+G+E EK P+FLK GD  +VK  P KP+ VE + ++PPLGRFA+RDM +TV VG+I  V+
Sbjct:  197 GDNITHRSENMKWYNGPTLEEYLDQLELPPKPVDKPLRIPIQDVYSISGVGTVPVGRVESGVLKVGDKIVFMPAGKVGEVRSIETHHTKMDKAEPGDNIGFNVRGVEKKDIKRGDVVGH-PNNPPTVADEFTARIIVVWHPTALANGYTPVIHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPLGRFAMRDMGKTVGVGIIVDVK 428          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.470e-67
Identity = 120/233 (51.50%), Postives = 169/233 (72.53%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVE 733
            GDN+IERS N+ WY GPTL++ALD++  P +P DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G  V F P      V+S+E HH  +++A PGDN+GFNV+ V+ +D++RG VA +  D+P   A  FT++V I+ HP  I  GY PV+  HT+ +A +  E+  K+D R+GK +E+ P+F+K GDA +V+  P KP+VVE + D+PPLGRFA+RDM +T+ +GV+  V+
Sbjct:  198 GDNLIERSPNMPWYNGPTLVEALDSLEPPPKPIDKPLRIPIQDVYAISGVGTVPVGRVETGVLRVGDKVVFMPPAKVGEVRSIETHHVRIEKAEPGDNIGFNVRGVSKRDIRRGDVAGH-LDNPPTVAEEFTARVFIIWHPTAITVGYTPVIHIHTASVASRIVEIKAKLDPRTGKVVEENPQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVK 429          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.470e-67
Identity = 120/242 (49.59%), Postives = 174/242 (71.90%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            G+N++++S  + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPVGRVETG L+ G VV F P+       +   VKS+EMHHE L+EALPGDN+GFNV+ V+  D+KRG VA ++ + P   R    F +Q+I++NHP  I  GY+PVL  HT+ + V+F +L+ K+D ++G  +E+ P+F+K GDA +V + P KP+V+E   + P LGRFA+RDM  T+A G++ S+++
Sbjct:  187 GENVVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLRVGEVVIFEPASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 428          
The following BLAST results are available for this feature:
BLAST of EY710866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_PYRHO2.370e-6851.24Elongation factor 1-alpha OS=Pyrococcus horikoshii... [more]
EF1A_METTH2.370e-6853.51Elongation factor 1-alpha OS=Methanobacterium ther... [more]
EF1A_METKA2.370e-6851.63Elongation factor 1-alpha OS=Methanopyrus kandleri... [more]
EF1A_METHJ2.370e-6851.91Elongation factor 1-alpha OS=Methanospirillum hung... [more]
EF1A_ARCFU3.096e-6852.84Elongation factor 1-alpha OS=Archaeoglobus fulgidu... [more]
EF1A_PYRAB4.043e-6851.65Elongation factor 1-alpha OS=Pyrococcus abyssi GN=... [more]
EF1A_THEAC1.536e-6753.19Elongation factor 1-alpha OS=Thermoplasma acidophi... [more]
EF1A_SULSO2.007e-6751.93Elongation factor 1-alpha OS=Sulfolobus solfataric... [more]
EF1A_STAMF4.470e-6751.50Elongation factor 1-alpha OS=Staphylothermus marin... [more]
EF1A_PYRWO4.470e-6749.59Elongation factor 1-alpha OS=Pyrococcus woesei GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710866 ID=EY710866; Name=EY710866; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCCCACGCGTCCTCCCACGCGTCCGGTGACAACATGATTG
AGAGGTCTACCAACCTTGACTGGTACAAGGGTCCAACCCTGCTGGATGCT
CTTGACAATATCAATGAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCT
GCCACTCCAGGACGTGTACAAGATTGGTGGCATTGGAACCGTCCCAGTGG
GTCGCGTTGAGACCGGTGTGCTCAAGCCTGGTATGGTGGTGACATTTGGT
CCCTCTGGATTGACAACTTAGGTTAAGTCTGTTGAGATGCACCACGAAGC
TCTGCAGGAGGCCCTTCCGGGTGACAATGTTGGCTTCAACGTGAAGAACG
TTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGAT
GATCCGGCCAGGGAAGCTGCCAACTTCACTTCACAGGTCATCATCATGAA
CCATCCTGGCCAGATTGGAAATGGATATGCCCCAGTGCTTGACTGCCACA
CCTCCCACATTGCTGTCAAGTTTTCTGAGCTTGTGACCAAGATTGACAGG
CGATCTGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGAGA
TGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACCT
TTCTCGACTACCCACCCCTTGGTCGTTTTGCTGTTAGGGACATGCGTCAG
ACTGTAGCTGTTGGTGTGATCAAGAGTGTTGAAAAGAAGGATCCATCGGG
TGGCAAAGGCACCAAGTCTGCTGCCAAGAAAAGTGAGGAGTTTTTTTGGG
ATCATCTGCTATAGGTAGCCTTTATTTTCCCGGGTTAGGCAATTTTGCCA
GGTTTAGTTGTTTACGGGAAACTCATTTTAATTCTCGAATTGGGTTTAAA
TCATGAGTTTTTTTGGAAGTGGAAAA
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