EY710866

Overview
NameEY710866
Unique NameEY710866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.784e-66
Identity = 120/236 (50.85%), Postives = 163/236 (69.07%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 742
            GDN+ ++S N  WY GPTL   +D    P++P+  PLRLP+QDVY I G+GTVPVGRVETG++KPG  V F P+G    +K+VEMHHE L  A PGDN+GFNV+ V  KD+KRG V  ++ + P   AA+FT+Q++++ HP  +  GY PV   HT+ IA  F EL  K++  +G+ LE+ P FLK GDA +VK++PTKP+V+E+  + P LGRFA+RDM  TVA G+   V  K+
Sbjct:  193 GDNVFKKSENTPWYNGPTLAQVIDGFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVVFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPT-VAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.101e-65
Identity = 119/228 (52.19%), Postives = 160/228 (70.18%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGV 718
            GDN+ E+S+N  WYKG TL+  LD ++EP +P D PLRLP+QDVY I G+GTVPVGR+ETG+LK    + F P+G+T  VKS+EMHHE L +A PGDNVGFNV+ V   D+KRG VA  +++ P+  A  F +Q++++ HPG +  GY PV   HT+ +A  F  L  K+D  +G+  E+ P FLK GDA +V + PTKPMV+E   + P +GRFA+RDM QTVA G+
Sbjct:  179 GDNISEKSSNTPWYKGNTLVQELDALDEPDKPVDLPLRLPIQDVYSITGVGTVPVGRIETGILKTAENIAFEPAGVTGEVKSIEMHHEVLDKAEPGDNVGFNVRGVGKNDIKRGDVAGTTQNPPS-VAKEFKAQIVVLQHPGVMTVGYTPVFHAHTAQVACTFLSLDVKLDPATGQPKEENPDFLKTGDAALVTIKPTKPMVIENIKEIPHMGRFAIRDMGQTVAAGM 405          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.438e-65
Identity = 117/236 (49.58%), Postives = 166/236 (70.34%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 742
            GDN +++S  + WYKGPTL++ +D  N P++P++ PLR+P+QDVY I G+GTVPVGRVETGV+KPG  V F P+G++  +K++E HHE L +A PGDNVGFNV+ V  KD+K+G V  +  + P   A  FT+Q++++ HP  +  GY PV   HT+ +A  F EL  K++  +G+  E+ P FLK GDA +VK++PTKPMV+E   + P LGRFA+RDM  TVA G+   V+ K+
Sbjct:  193 GDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTITGVGTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGKKDIKKGDVLGHPDNIPT-VAEEFTAQIVVLQHPSVMTVGYTPVFHAHTAQVACTFMELQKKLNPATGEVKEENPDFLKAGDAAIVKIMPTKPMVIENVKEIPQLGRFAIRDMGMTVAAGMCIDVKAKN 427          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.453e-65
Identity = 119/236 (50.42%), Postives = 163/236 (69.07%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 742
            GDN+ ++S    WY GPTL + +D    P++P+  PLRLP+QDVY I G+GTVPVGRVETG++KPG  V F P+G    +K+VEMHHE L  A PGDN+GFNV+ V  KD+KRG V  ++ + P   AA+FT+Q++++ HP  +  GY PV   HT+ IA  F EL  K++  +G+ LE+ P FLK GDA +VK++PTKP+V+E+  + P LGRFA+RDM  TVA G+   V  K+
Sbjct:  193 GDNVFKKSDRTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVIFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPT-VAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.453e-65
Identity = 119/236 (50.42%), Postives = 163/236 (69.07%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 742
            GDN+ ++S    WY GPTL + +D    P++P+  PLRLP+QDVY I G+GTVPVGRVETG++KPG  V F P+G    +K+VEMHHE L  A PGDN+GFNV+ V  KD+KRG V  ++ + P   AA+FT+Q++++ HP  +  GY PV   HT+ IA  F EL  K++  +G+ LE+ P FLK GDA +VK++PTKP+V+E+  + P LGRFA+RDM  TVA G+   V  K+
Sbjct:  193 GDNVFKKSDKTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVIFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPT-VAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 3.203e-65
Identity = 118/236 (50.00%), Postives = 163/236 (69.07%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 742
            GDN+ ++S    WY GPTL + +D    P++P+  PLRLP+QDVY I G+GTVPVGRVETG+++PG  V F P+G    +K+VEMHHE L  A PGDN+GFNV+ V  KD+KRG V  ++ + P   AA+FT+Q++++ HP  +  GY PV   HT+ IA  F EL  K++  +G+ LE+ P FLK GDA +VK++PTKP+V+E+  + P LGRFA+RDM  TVA G+   V  K+
Sbjct:  193 GDNVFKKSDKTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIRPGDKVIFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPT-VAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.217e-64
Identity = 112/232 (48.28%), Postives = 162/232 (69.83%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            GDN+++ S    WY GPT+LDAL+ + EP++P + PLR+P+QDVY I G+GTVPVGRVETGVLK G  V F P+ ++  VKS+E+HH+ + EA PGDN+G+NV+ +   D++RG V  +  D+P   A  FT+Q++++ HP  I  GY PV  CHT+ +A   +E+  K+D R+G   E+ P F+K GDA ++ + PTKPMV+E   + P LGRFA+RDM  T+A G+ ++V
Sbjct:  191 GDNVVKHSDRTKWYTGPTVLDALNALKEPQKPVNLPLRIPVQDVYSISGVGTVPVGRVETGVLKKGDKVIFEPAHVSGEVKSIEIHHQEIPEAYPGDNIGWNVRGIGKNDIRRGDVCGH-VDNPPTVAKEFTAQIVVLQHPSAISAGYTPVFHCHTAQVACTITEIKAKLDPRTGSVKEQNPAFIKTGDAAIISVRPTKPMVIEKVKEIPQLGRFAIRDMGMTIAAGMCQNV 421          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.590e-64
Identity = 120/235 (51.06%), Postives = 163/235 (69.36%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEKK 739
            GDN+  +ST + WY GPTL + LD +  P +P DKPLR+P+Q+VY I G+G VPVGR+E+GVLK G  + F P G    V+S+E HH  + +A PGDN+GFNV+ V  KD+KRG VA  S  +P   A  FT+QVI++ HP  +G GY PVL  HT+ IA + SE+ ++ID ++GKE EK P+F+K GD+ +VK  P K +V E F ++P LGRFA+RDM +TV VGVI  V+ +
Sbjct:  197 GDNVTHKSTKMPWYNGPTLEELLDQLEIPPKPVDKPLRIPIQEVYSISGVGVVPVGRIESGVLKVGDKIVFMPVGKIGEVRSIETHHTKIDKAEPGDNIGFNVRGVEKKDVKRGDVA-GSVQNPPTVADEFTAQVIVIWHPTAVGVGYTPVLHVHTASIACRVSEITSRIDPKTGKEAEKNPQFIKAGDSAIVKFKPIKELVAEKFREFPALGRFAMRDMGKTVGVGVIIDVKPR 430          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 3.542e-64
Identity = 116/233 (49.79%), Postives = 165/233 (70.82%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVE 733
            GDN+IERS N+ WY GPTL++ALD +  P +P DKPLR+P+Q+VY I G GTVPVGRVETGVL+ G  V F P G+   V+S+EMH++ LQ+A PGDN+GF V+ V+  D+KRG VA +  D P   A  F +++ ++ HP  I  GY PV+  HT+ ++ +  E+  K+D ++G+ +E+ P+FLK GDA +V+  P KP+VVE F + P LGRFA+RDM +TV +G++  V+
Sbjct:  197 GDNLIERSPNMPWYNGPTLVEALDQLQPPAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKVVFMPPGVVGEVRSIEMHYQQLQQAEPGDNIGFAVRGVSKSDIKRGDVAGH-LDKPPTVAEEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQVVEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDVK 428          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 6.041e-64
Identity = 116/235 (49.36%), Postives = 160/235 (68.09%), Query Frame = 2
Query:   35 GDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEKK 739
            GDN++  S    WYKG T+++AL+N+  P++PS  PLR+P++D Y I GIGTVPVGRVETG +K G  V F P G    VKS+EMHHE + +ALPGDN+G+NV+ +   D++RG V  ++ D+P + A  F  Q++++ HP  I  GY PV   HTS IA +  EL  K+D +SG+  E+ P FLK GDA +V + PTKPMV+E   + P LGRFA+RDM  T+A G+  SV++K
Sbjct:  189 GDNVVNHSEKTPWYKGVTMMEALNNLKVPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGTMKKGDKVVFMPGGAAGEVKSIEMHHEEIPQALPGDNIGWNVRGIGKADVRRGDVCGHT-DNPPKVADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPKSGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422          
The following BLAST results are available for this feature:
BLAST of EY710866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_METMP3.784e-6650.85Elongation factor 1-alpha OS=Methanococcus maripal... [more]
EF1A_METST1.101e-6552.19Elongation factor 1-alpha OS=Methanosphaera stadtm... [more]
EF1A_META31.438e-6549.58Elongation factor 1-alpha OS=Methanococcus aeolicu... [more]
EF1A_METM62.453e-6550.42Elongation factor 1-alpha OS=Methanococcus maripal... [more]
EF1A_METM52.453e-6550.42Elongation factor 1-alpha OS=Methanococcus maripal... [more]
EF1A_METM73.203e-6550.00Elongation factor 1-alpha OS=Methanococcus maripal... [more]
EF1A_METTP1.217e-6448.28Elongation factor 1-alpha OS=Methanosaeta thermoph... [more]
EF1A_SULAC1.590e-6451.06Elongation factor 1-alpha OS=Sulfolobus acidocalda... [more]
EF1A_AERPE3.542e-6449.79Elongation factor 1-alpha OS=Aeropyrum pernix GN=t... [more]
EF1A_METBF6.041e-6449.36Elongation factor 1-alpha OS=Methanosarcina barker... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710866 ID=EY710866; Name=EY710866; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCCCACGCGTCCTCCCACGCGTCCGGTGACAACATGATTG
AGAGGTCTACCAACCTTGACTGGTACAAGGGTCCAACCCTGCTGGATGCT
CTTGACAATATCAATGAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCT
GCCACTCCAGGACGTGTACAAGATTGGTGGCATTGGAACCGTCCCAGTGG
GTCGCGTTGAGACCGGTGTGCTCAAGCCTGGTATGGTGGTGACATTTGGT
CCCTCTGGATTGACAACTTAGGTTAAGTCTGTTGAGATGCACCACGAAGC
TCTGCAGGAGGCCCTTCCGGGTGACAATGTTGGCTTCAACGTGAAGAACG
TTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGAT
GATCCGGCCAGGGAAGCTGCCAACTTCACTTCACAGGTCATCATCATGAA
CCATCCTGGCCAGATTGGAAATGGATATGCCCCAGTGCTTGACTGCCACA
CCTCCCACATTGCTGTCAAGTTTTCTGAGCTTGTGACCAAGATTGACAGG
CGATCTGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGAGA
TGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACCT
TTCTCGACTACCCACCCCTTGGTCGTTTTGCTGTTAGGGACATGCGTCAG
ACTGTAGCTGTTGGTGTGATCAAGAGTGTTGAAAAGAAGGATCCATCGGG
TGGCAAAGGCACCAAGTCTGCTGCCAAGAAAAGTGAGGAGTTTTTTTGGG
ATCATCTGCTATAGGTAGCCTTTATTTTCCCGGGTTAGGCAATTTTGCCA
GGTTTAGTTGTTTACGGGAAACTCATTTTAATTCTCGAATTGGGTTTAAA
TCATGAGTTTTTTTGGAAGTGGAAAA
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