EY710866

Overview
NameEY710866
Unique NameEY710866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_BURM7 (Elongation factor Tu OS=Burkholderia mallei (strain NCTC 10247) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.390e-14
Identity = 64/218 (29.36%), Postives = 105/218 (48.17%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L DALD  I  P+R  D    +P++DV+ I G GTV  GRVE GV+K G    +V    +  TT    VEM  + L +   GDNVG  ++    +D++RG V   +K        +FT++V +++     G  + P  + +      + +++   I      EL K+ + +  GD   + +    P+ +E  L      RFA+R+  +TV  GV+  +
Sbjct:  194 LADALDTYIPTPERAVDGAFLMPVEDVFSISGRGTVVTGRVERGVIKVGEEIEIVGIKATAKTT-CTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVL--AKPGSITPHTHFTAEVYVLSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_ASTLO (Elongation factor Tu, plastid OS=Astasia longa GN=tufA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.390e-14
Identity = 65/219 (29.68%), Postives = 111/219 (50.68%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV-TFGPSGL-TT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIP--TKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+D +D+ I  P R +DK   L ++DV  I G GTV  GR+E G +K G  V   G   + +T +  +EM  ++L EA+ GDNVG  ++ +   +++RG V   +K    +    F SQV I+    + G  + P  + +     V+ +++  KI+     +     + +  GD   +KMI    +P+ +E  +      RFA+R+  +TV  GVI ++
Sbjct:  202 LMDKIDSYIPTPIRDTDKDFLLAIEDVLSITGRGTVATGRIERGKIKVGETVELIGLKNIKSTTITGLEMFQKSLDEAIAGDNVGVLLRGIQKNEVERGMVI--AKPGTIQPHIKFNSQVYILTK--EEGGRHTPFFEGYKPQFYVRTTDVTGKIESFKSDD-GTTVQMVMPGD--KIKMIVELVQPIAIEKGM------RFAIREGGKTVGAGVIINI 407          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_ANAVT (Elongation factor Tu OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.390e-14
Identity = 62/219 (28.31%), Postives = 105/219 (47.95%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--T*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            L+DA+D+ I +P+R  DKP  + ++DV+ I G GTV  GR+E G +K G VV       T  T V  +EM  ++L E + GDN G  ++ +   D++RG V   +K         F  +V ++    + G    P    +     V+ +++   I   +  E E   + +  GD   V +    P+ +E  +      RFA+R+  +T+  GV+  + K
Sbjct:  202 LMDAVDSYIPDPERDIDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGDVVELVGIRDTRNTTVTGIEMFKKSLDEGMAGDNAGVLLRGIQKTDIERGMVL--AKPGSITPHTQFEGEVYVLTE--KEGGRKTPFFAGYRPQFYVRTTDVTGTIKAFTSDEGE-AVEMVMPGDRIKVTVELINPIAIEQGM------RFAIREGGRTIGAGVVSKIVK 409          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_ANASP (Elongation factor Tu OS=Anabaena sp. (strain PCC 7120) GN=tuf PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.390e-14
Identity = 62/219 (28.31%), Postives = 105/219 (47.95%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--T*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            L+DA+D+ I +P+R  DKP  + ++DV+ I G GTV  GR+E G +K G VV       T  T V  +EM  ++L E + GDN G  ++ +   D++RG V   +K         F  +V ++    + G    P    +     V+ +++   I   +  E E   + +  GD   V +    P+ +E  +      RFA+R+  +T+  GV+  + K
Sbjct:  202 LMDAVDSYIPDPERDIDKPFLMAVEDVFSITGRGTVATGRIERGKVKVGDVVELVGIRDTRNTTVTGIEMFKKSLDEGMAGDNAGVLLRGIQKADIERGMVL--AKPGSITPHTQFEGEVYVLTE--KEGGRKTPFFAGYRPQFYVRTTDVTGTIKAFTSDEGE-TVEMVMPGDRIKVTVELINPIAIEQGM------RFAIREGGRTIGAGVVSKIVK 409          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_AGRT5 (Elongation factor Tu OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=tufA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.390e-14
Identity = 62/218 (28.44%), Postives = 105/218 (48.17%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+ A+D  I  P+RP D+P  +P++DV+ I G GTV  GRVE G++K G    +V   P+  TT V  VEM  + L +   GDN+G  V+ V    ++RG +    K    +    F ++  I+    + G  + P    +      + +++   +    G E+      +  GD   V++    P+ +E  L      RFA+R+  +TV  G++ S+
Sbjct:  189 LMAAVDAYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIRPTSKTT-VTGVEMFRKLLDQGQAGDNIGALVRGVTRDGVERGQIL--CKPGSVKPHKKFMAEAYILTK--EEGGRHTPFFTNYRPQFYFRTTDVTGIVSLPEGTEM------VMPGDNVTVEVELIVPIAMEEKL------RFAIREGGRTVGAGIVASI 389          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_STRCO (Elongation factor Tu-1 OS=Streptomyces coelicolor GN=tuf1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.390e-14
Identity = 61/220 (27.73%), Postives = 104/220 (47.27%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            L+ A+D  I EP+R  DKP  +P++DV+ I G GTV  GR+E GVLK      ++       TT V  +EM  + L E   G+NVG  ++ +  +D++RG V    K         F +Q  I++     G  + P  + +      + +++   +    G E+      +  GD   +K+   +P+ +E  L      +FA+R+  +TV  G +  + K
Sbjct:  194 LMKAVDEAIPEPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLKVNETVDIIGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERGQVI--IKPGSVTPHTEFEAQAYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTEMKVELIQPVAMEEGL------KFAIREGGRTVGAGQVTKINK 397          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_PSYWF (Elongation factor Tu 1 OS=Psychrobacter sp. (strain PRwf-1) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.390e-14
Identity = 63/219 (28.77%), Postives = 108/219 (49.32%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVE 733
            LL  LD  I EP+R  DKP  +P++DV+ I G GTV  GRVE+G++K G    +V    +  TT    VEM  + L E   G+N G  ++    +D++RG V   +K         F ++V +++   + G  + P L+ +      + +++   I  + G E+      +  GD   + +    P+ ++  L      RFA+R+  +TV  GV+ +V+
Sbjct:  194 LLQTLDTYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVESGIVKVGDEIEIVGIRDTQKTT-CTGVEMFRKLLDEGRAGENCGVLLRGTKREDVQRGQVL--AKPGSITPHTKFDAEVYVLSK--EEGGRHTPFLNGYRPQFYFRTTDVTGAISLQEGTEM------VMPGDNVEMSVELIHPIAMDKGL------RFAIREGGRTVGAGVVANVK 395          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_SYNPW (Elongation factor Tu OS=Synechococcus sp. (strain WH7803) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 61/221 (27.60%), Postives = 106/221 (47.96%), Query Frame = 2
Query:   89 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSEL---VTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+ A+D NI EP+R  DKP  + ++DV+ I G GTV  GR+E G++K G    +V    +  TT V  VEM  + L E + GDNVG  ++ +  +D++RG V    K         F  +V ++    + G  + P    +     ++ +++   +T      G ++E     +  GD   +      P+ +E  +      RFA+R+  +T+  GV+  +
Sbjct:  192 LMQAVDANIPEPEREVDKPFLMAIEDVFSITGRGTVATGRIERGIVKVGEEIEIVGIKDTRKTT-VTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMVL--VKPGSITPHTKFEGEVYVLKK--EEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTADDGSDVE----MVMPGDRIKMTGELICPVAIEQGM------RFAIREGGRTIGAGVVSKI 397          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_SODGM (Elongation factor Tu OS=Sodalis glossinidius (strain morsitans) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 67/217 (30.88%), Postives = 104/217 (47.93%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF-GPSGLT-T*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L +ALD+ I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V   G    T T    VEM  + L E   G+NVG  ++     D++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   + +    P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  192 LAEALDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVL--AKPGSIKPHTQFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIKMVVNLIAPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_RICSI (Elongation factor Tu OS=Rickettsia sibirica GN=tuf PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 59/218 (27.06%), Postives = 111/218 (50.92%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G    +V    +  TT    VEM  + L E   GDNVG  ++    ++++RG V   +K    +    F ++V +++   + G  + P  + +      + +++   I      +L  + +++  GD     +   KP+ ++  L      +F++R+  +TV  GV+  +
Sbjct:  192 LMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEIVGLKDTQKTT-CTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQWVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392          
The following BLAST results are available for this feature:
BLAST of EY710866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BURM74.390e-1429.36Elongation factor Tu OS=Burkholderia mallei (strai... [more]
EFTU_ASTLO4.390e-1429.68Elongation factor Tu, plastid OS=Astasia longa GN=... [more]
EFTU_ANAVT4.390e-1428.31Elongation factor Tu OS=Anabaena variabilis (strai... [more]
EFTU_ANASP4.390e-1428.31Elongation factor Tu OS=Anabaena sp. (strain PCC 7... [more]
EFTU_AGRT54.390e-1428.44Elongation factor Tu OS=Agrobacterium tumefaciens ... [more]
EFTU1_STRCO4.390e-1427.73Elongation factor Tu-1 OS=Streptomyces coelicolor ... [more]
EFTU1_PSYWF4.390e-1428.77Elongation factor Tu 1 OS=Psychrobacter sp. (strai... [more]
EFTU_SYNPW5.734e-1427.60Elongation factor Tu OS=Synechococcus sp. (strain ... [more]
EFTU_SODGM5.734e-1430.88Elongation factor Tu OS=Sodalis glossinidius (stra... [more]
EFTU_RICSI5.734e-1427.06Elongation factor Tu OS=Rickettsia sibirica GN=tuf... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710866 ID=EY710866; Name=EY710866; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCCCACGCGTCCTCCCACGCGTCCGGTGACAACATGATTG
AGAGGTCTACCAACCTTGACTGGTACAAGGGTCCAACCCTGCTGGATGCT
CTTGACAATATCAATGAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCT
GCCACTCCAGGACGTGTACAAGATTGGTGGCATTGGAACCGTCCCAGTGG
GTCGCGTTGAGACCGGTGTGCTCAAGCCTGGTATGGTGGTGACATTTGGT
CCCTCTGGATTGACAACTTAGGTTAAGTCTGTTGAGATGCACCACGAAGC
TCTGCAGGAGGCCCTTCCGGGTGACAATGTTGGCTTCAACGTGAAGAACG
TTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGAT
GATCCGGCCAGGGAAGCTGCCAACTTCACTTCACAGGTCATCATCATGAA
CCATCCTGGCCAGATTGGAAATGGATATGCCCCAGTGCTTGACTGCCACA
CCTCCCACATTGCTGTCAAGTTTTCTGAGCTTGTGACCAAGATTGACAGG
CGATCTGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGAGA
TGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACCT
TTCTCGACTACCCACCCCTTGGTCGTTTTGCTGTTAGGGACATGCGTCAG
ACTGTAGCTGTTGGTGTGATCAAGAGTGTTGAAAAGAAGGATCCATCGGG
TGGCAAAGGCACCAAGTCTGCTGCCAAGAAAAGTGAGGAGTTTTTTTGGG
ATCATCTGCTATAGGTAGCCTTTATTTTCCCGGGTTAGGCAATTTTGCCA
GGTTTAGTTGTTTACGGGAAACTCATTTTAATTCTCGAATTGGGTTTAAA
TCATGAGTTTTTTTGGAAGTGGAAAA
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