EY710866

Overview
NameEY710866
Unique NameEY710866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_RICRI (Elongation factor Tu OS=Rickettsia rickettsii GN=tuf PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 59/218 (27.06%), Postives = 111/218 (50.92%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G    +V    +  TT    VEM  + L E   GDNVG  ++    ++++RG V   +K    +    F ++V +++   + G  + P  + +      + +++   I      +L  + +++  GD     +   KP+ ++  L      +F++R+  +TV  GV+  +
Sbjct:  192 LMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEIVGLKDTQKTT-CTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQWVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_RICCN (Elongation factor Tu OS=Rickettsia conorii GN=tuf PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 59/218 (27.06%), Postives = 110/218 (50.46%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G    +V    +  TT    VEM  + L E   GDNVG  ++    ++++RG V   +K    +    F ++V +++   + G  + P  + +      + +++   I      +L  + + +  GD     +   KP+ ++  L      +F++R+  +TV  GV+  +
Sbjct:  192 LMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEIVGLKDTQKTT-CTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLSADKQMVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_PORYE (Elongation factor Tu, chloroplastic OS=Porphyra yezoensis GN=tufA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 60/222 (27.03%), Postives = 109/222 (49.10%), Query Frame = 2
Query:   86 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            +L++A+D  I  P+R  DK   + ++DV+ I G GTV  GR+E G++K G  +     GL    TT +  +EM  + L+E L GDN+G  ++ V  KD++RG V   +K         F ++V I+    + G  + P    +     V+ +++   I++ +  +   + + +  GD   +       + +E  +      RFA+R+  +TV  GV+  + K
Sbjct:  201 SLMEAVDTYIPTPERDVDKTFLMAVEDVFSITGRGTVATGRIERGIIKVGDTIEI--VGLRETRTTTITGLEMFQKTLEEGLAGDNIGILLRGVQKKDIERGMVL--AKPGTITPHTQFEAEVYILTK--EEGGRHTPFFPGYRPQFYVRTTDVTGTINQFTADD-GTDAEMVMPGDRIKMTAELINAIAIEQGM------RFAIREGGRTVGAGVVSKILK 409          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_PORPU (Elongation factor Tu, chloroplastic OS=Porphyra purpurea GN=tufA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 60/222 (27.03%), Postives = 109/222 (49.10%), Query Frame = 2
Query:   86 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            +L++A+D  I  P+R  DK   + ++DV+ I G GTV  GR+E G++K G  +     GL    TT +  +EM  + L+E L GDN+G  ++ V  KD++RG V   +K         F ++V I+    + G  + P    +     V+ +++   I++ +  +   + + +  GD   +       + +E  +      RFA+R+  +TV  GV+  + K
Sbjct:  201 SLMEAVDTYIPTPERDVDKTFLMAVEDVFSITGRGTVATGRIERGIIKVGDTIEI--VGLRETRTTTITGLEMFQKTLEEGLAGDNIGILLRGVQKKDIERGMVL--AKPGTITPHTQFEAEVYILTK--EEGGRHTPFFPGYRPQFYVRTTDVTGTINQFTADD-GTDAEMVMPGDRIKMTAELINAIAIEQGM------RFAIREGGRTVGAGVVSKILK 409          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_POLNA (Elongation factor Tu OS=Polaromonas naphthalenivorans (strain CJ2) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 61/217 (28.11%), Postives = 103/217 (47.47%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--T*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L DALDN I  P+R  D    +P++DV+ I G GTV  GR+E G++K G  +       T  T    VEM  + L +   GDNVG  ++    +D++RG V    K    +   +FT ++ +++     G  + P  + +      + +++   I+   GKE+      +  GD   + +    P+ +E  L      RFA+R+  +TV  GV+  +
Sbjct:  194 LADALDNYIPLPERAVDGAFLMPVEDVFSISGRGTVVTGRIERGIIKVGEEIEIVGIADTQKTICTGVEMFRKLLDQGQAGDNVGILLRGTKREDVQRGQVL--CKPGSIKPHTHFTGEIYVLSK--DEGGRHTPFFNNYRPQFYFRTTDVTGAIELPEGKEM------VMPGDNVSITVKLINPIAMEEGL------RFAIREGGRTVGAGVVAKI 394          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_NOSP7 (Elongation factor Tu OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 63/221 (28.51%), Postives = 107/221 (48.42%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            L+DA+D+ I  P+R  DKP  + ++DV+ I G GTV  GR+E G +K G  V     GL    TT V  +EM  ++L+E L GDN G  ++ +  +D++RG V   +K         F  +V ++    + G    P    +     V+ +++   I   +  E  KE + +  GD   + +     + +E  +      RFA+R+  +T+  GV+  + K
Sbjct:  202 LMDAVDSFIPTPERDVDKPFLMAVEDVFTITGRGTVATGRIERGKVKVGDTVEL--IGLKDTRTTAVTGIEMFKKSLEEGLAGDNAGVLLRGLKKEDIERGMVI--AKPGSITPHTQFEGEVYVLTE--KEGGRKTPFFAGYRPQFYVRTTDVTGTIKAYTSDE-GKEVEMVMPGDRIKMTVELINAIAIEQGM------RFAIREGGRTIGAGVVSKIIK 409          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSS (Elongation factor Tu OS=Mycobacterium sp. (strain MCS) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 63/227 (27.75%), Postives = 106/227 (46.70%), Query Frame = 2
Query:   71 WYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            W K    L+DA+D +I +P R +D+P  +P++DV+ I G GTV  GRVE GV+       +V   P    T V  VEM  + L +   GDNVG  ++ +  +D++RG V    K         F  QV I++     G  + P  + +      + +++   +    G E+      +  GD   + +   +P+ ++  L      RFA+R+  +TV  G +  + K
Sbjct:  186 WVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVVNVNEEVEIVGIRPGTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVV--VKPGTTTPHTEFDGQVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTDISVKLIQPVAMDEGL------RFAIREGGRTVGAGRVTKIHK 396          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSK (Elongation factor Tu OS=Mycobacterium sp. (strain KMS) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 63/227 (27.75%), Postives = 106/227 (46.70%), Query Frame = 2
Query:   71 WYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            W K    L+DA+D +I +P R +D+P  +P++DV+ I G GTV  GRVE GV+       +V   P    T V  VEM  + L +   GDNVG  ++ +  +D++RG V    K         F  QV I++     G  + P  + +      + +++   +    G E+      +  GD   + +   +P+ ++  L      RFA+R+  +TV  G +  + K
Sbjct:  186 WVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVVNVNEEVEIVGIRPGTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVV--VKPGTTTPHTEFDGQVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTDISVKLIQPVAMDEGL------RFAIREGGRTVGAGRVTKIHK 396          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSJ (Elongation factor Tu OS=Mycobacterium sp. (strain JLS) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 63/227 (27.75%), Postives = 106/227 (46.70%), Query Frame = 2
Query:   71 WYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            W K    L+DA+D +I +P R +D+P  +P++DV+ I G GTV  GRVE GV+       +V   P    T V  VEM  + L +   GDNVG  ++ +  +D++RG V    K         F  QV I++     G  + P  + +      + +++   +    G E+      +  GD   + +   +P+ ++  L      RFA+R+  +TV  G +  + K
Sbjct:  186 WVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVVNVNEEVEIVGIRPGTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVV--VKPGTTTPHTEFDGQVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTDISVKLIQPVAMDEGL------RFAIREGGRTVGAGRVTKIHK 396          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_KLEP7 (Elongation factor Tu OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=tufA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.734e-14
Identity = 69/234 (29.49%), Postives = 111/234 (47.44%), Query Frame = 2
Query:   44 MIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            +IE + +LD Y           I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G    +V    +  TT    VEM  + L E   G+NVG  ++ +  ++++RG V   +K         F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  189 IIELAGHLDTY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETAKTT-CTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTINPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
The following BLAST results are available for this feature:
BLAST of EY710866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_RICRI5.734e-1427.06Elongation factor Tu OS=Rickettsia rickettsii GN=t... [more]
EFTU_RICCN5.734e-1427.06Elongation factor Tu OS=Rickettsia conorii GN=tuf ... [more]
EFTU_PORYE5.734e-1427.03Elongation factor Tu, chloroplastic OS=Porphyra ye... [more]
EFTU_PORPU5.734e-1427.03Elongation factor Tu, chloroplastic OS=Porphyra pu... [more]
EFTU_POLNA5.734e-1428.11Elongation factor Tu OS=Polaromonas naphthalenivor... [more]
EFTU_NOSP75.734e-1428.51Elongation factor Tu OS=Nostoc punctiforme (strain... [more]
EFTU_MYCSS5.734e-1427.75Elongation factor Tu OS=Mycobacterium sp. (strain ... [more]
EFTU_MYCSK5.734e-1427.75Elongation factor Tu OS=Mycobacterium sp. (strain ... [more]
EFTU_MYCSJ5.734e-1427.75Elongation factor Tu OS=Mycobacterium sp. (strain ... [more]
EFTU_KLEP75.734e-1429.49Elongation factor Tu OS=Klebsiella pneumoniae subs... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710866 ID=EY710866; Name=EY710866; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCCCACGCGTCCTCCCACGCGTCCGGTGACAACATGATTG
AGAGGTCTACCAACCTTGACTGGTACAAGGGTCCAACCCTGCTGGATGCT
CTTGACAATATCAATGAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCT
GCCACTCCAGGACGTGTACAAGATTGGTGGCATTGGAACCGTCCCAGTGG
GTCGCGTTGAGACCGGTGTGCTCAAGCCTGGTATGGTGGTGACATTTGGT
CCCTCTGGATTGACAACTTAGGTTAAGTCTGTTGAGATGCACCACGAAGC
TCTGCAGGAGGCCCTTCCGGGTGACAATGTTGGCTTCAACGTGAAGAACG
TTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGAT
GATCCGGCCAGGGAAGCTGCCAACTTCACTTCACAGGTCATCATCATGAA
CCATCCTGGCCAGATTGGAAATGGATATGCCCCAGTGCTTGACTGCCACA
CCTCCCACATTGCTGTCAAGTTTTCTGAGCTTGTGACCAAGATTGACAGG
CGATCTGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGAGA
TGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACCT
TTCTCGACTACCCACCCCTTGGTCGTTTTGCTGTTAGGGACATGCGTCAG
ACTGTAGCTGTTGGTGTGATCAAGAGTGTTGAAAAGAAGGATCCATCGGG
TGGCAAAGGCACCAAGTCTGCTGCCAAGAAAAGTGAGGAGTTTTTTTGGG
ATCATCTGCTATAGGTAGCCTTTATTTTCCCGGGTTAGGCAATTTTGCCA
GGTTTAGTTGTTTACGGGAAACTCATTTTAATTCTCGAATTGGGTTTAAA
TCATGAGTTTTTTTGGAAGTGGAAAA
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