EY710866

Overview
NameEY710866
Unique NameEY710866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_XYLFA (Elongation factor Tu OS=Xylella fastidiosa GN=tufA PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 62/218 (28.44%), Postives = 106/218 (48.62%), Query Frame = 2
Query:   89 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L +ALD +I  P+R  D+P  +P++DV+ I G GTV  GRVE GV+K G    +V   P+  T  V  VEM  + L +   GDN G  ++     +++RG V   +K    +    F ++V +++   + G  + P  + +T    ++ +++  K+    G E+      +  GD   V +    P+ +          RFA+R+  +TV  GV+  V
Sbjct:  194 LAEALDTHIPNPERAIDRPFLMPVEDVFSISGRGTVVTGRVECGVIKVGDEVEIVGIRPTSKTI-VTGVEMFRKLLDQGQAGDNAGLLLRGTKRDEVERGQVL--AKPGSIKAHKEFEAEVYVLSK--EEGGRHTPFFNGYTPQFYMRTTDITGKVCLPEGVEM------VMPGDNVKVTVSLINPVAMGEG------QRFAIREGGRTVGAGVVSKV 394          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_WOLSU (Elongation factor Tu OS=Wolinella succinogenes GN=tuf PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 61/212 (28.77%), Postives = 100/212 (47.17%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            I  P+R  DKP  +P++DV+ I G GTV  GR+E GV+K G    +V    +  TT V  VEM  + L +   GDNVG  ++    +D++RG V    K        NF  +V +++   + G  + P  + +     V+ +++   I    G E+      +  GD   + +    P+ +E         RFA+R+  +TV  GV+  + K
Sbjct:  205 IPTPERDVDKPFLMPVEDVFSIAGRGTVVTGRIERGVVKVGDEVEIVGIRNTQKTT-VTGVEMFRKELDKGEAGDNVGVLLRGTKKEDVERGMVL--CKIGSITPHTNFEGEVYVLSK--EEGGRHTPFFNGYRPQFYVRTTDVTGSISLPEGVEM------VMPGDNVKINVELIAPVALEEGT------RFAIREGGRTVGAGVVTKITK 399          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_RICRS (Elongation factor Tu OS=Rickettsia rickettsii (strain Sheila Smith) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 59/218 (27.06%), Postives = 110/218 (50.46%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G    +V    +  TT    VEM  + L E   GDNVG  ++    ++++RG V   +K    +    F ++V +++   + G  + P  + +      + +++   I      +L  + + +  GD     +   KP+ ++  L      +F++R+  +TV  GV+  +
Sbjct:  192 LMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEIVGLKDTQKTT-CTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQMVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_RICRO (Elongation factor Tu OS=Rickettsia rickettsii (strain Iowa) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 59/218 (27.06%), Postives = 110/218 (50.46%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G    +V    +  TT    VEM  + L E   GDNVG  ++    ++++RG V   +K    +    F ++V +++   + G  + P  + +      + +++   I      +L  + + +  GD     +   KP+ ++  L      +F++R+  +TV  GV+  +
Sbjct:  192 LMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEIVGLKDTQKTT-CTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQMVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_RICPU (Elongation factor Tu OS=Rickettsia peacockii (strain Rustic) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 59/218 (27.06%), Postives = 110/218 (50.46%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G    +V    +  TT    VEM  + L E   GDNVG  ++    ++++RG V   +K    +    F ++V +++   + G  + P  + +      + +++   I      +L  + + +  GD     +   KP+ ++  L      +F++R+  +TV  GV+  +
Sbjct:  192 LMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEIVGLKDTQKTT-CTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQMVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_RICM5 (Elongation factor Tu OS=Rickettsia massiliae (strain Mtu5) GN=tuf PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 59/218 (27.06%), Postives = 110/218 (50.46%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G    +V    +  TT    VEM  + L E   GDNVG  ++    ++++RG V   +K    +    F ++V +++   + G  + P  + +      + +++   I      +L  + + +  GD     +   KP+ ++  L      +F++R+  +TV  GV+  +
Sbjct:  192 LMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGDEIEIVGLKDTQKTT-CTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQMVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_RICAE (Elongation factor Tu OS=Rickettsia africae (strain ESF-5) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 59/218 (27.06%), Postives = 110/218 (50.46%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+DA+D+ I +P R +DKP  +P++DV+ I G GTV  GRVE+G++K G    +V    +  TT    VEM  + L E   GDNVG  ++    ++++RG V   +K    +    F ++V +++   + G  + P  + +      + +++   I      +L  + + +  GD     +   KP+ ++  L      +F++R+  +TV  GV+  +
Sbjct:  192 LMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEIVGLKDTQKTT-CTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQMVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGVVTKI 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_RALSO (Elongation factor Tu OS=Ralstonia solanacearum GN=tufA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 62/217 (28.57%), Postives = 103/217 (47.47%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--T*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L DALD+ I  P+R  D    +P++DV+ I G GTV  GR+E G++K G  +       T  T    VEM  + L +   GDNVG  ++    +D++RG V    K    +   +FT +V I++     G  + P  + +      + +++   I      EL K+ + +  GD   + +    P+ +E  L      RFA+R+  +TV  GV+  +
Sbjct:  194 LADALDSYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRIERGIIKVGEEIEIVGIKATQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVL--CKPGSIKPHTHFTGEVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_POLSJ (Elongation factor Tu OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 63/218 (28.90%), Postives = 104/218 (47.71%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L DALD  I  P+R  D    +P++DV+ I G GTV  GRVE GV+K G    +V    +  TT    VEM  + L +   GDNVG  ++    +D++RG V    K    +   +FT ++ +++     G  + P  + +      + +++   I+   GKE+      +  GD   + +    P+ +E  L      RFA+R+  +TV  GV+  +
Sbjct:  194 LADALDTYIPLPERAVDGAFLMPVEDVFSISGRGTVVTGRVERGVIKVGEEIEIVGIADTQKTT-CTGVEMFRKLLDQGQAGDNVGILLRGTKREDVQRGQVL--CKPGSIKPHTHFTGEIYVLSK--DEGGRHTPFFNNYRPQFYFRTTDVTGAIELPEGKEM------VMPGDNVSITVKLINPIAMEEGL------RFAIREGGKTVGAGVVAKI 394          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_MYCUA (Elongation factor Tu OS=Mycobacterium ulcerans (strain Agy99) GN=tuf PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 60/220 (27.27%), Postives = 105/220 (47.73%), Query Frame = 2
Query:   89 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            L+DA+D +I +P R +D+P  +P++DV+ I G GTV  GRVE G++       +V   P+   T V  VEM  + L +   GDNVG  ++ +  +D++RG V    K         F  QV I++     G  + P  + +      + +++   +    G E+      +  GD   + +   +P+ ++  L      RFA+R+  +TV  G +  + K
Sbjct:  193 LMDAVDESIPDPVRETDRPFLMPVEDVFTITGRGTVVTGRVERGIINVNEEVEIVGIRPTSTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVV--VKPGTTTPHTEFEGQVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTNISVKLIQPVAMDDGL------RFAIREGGRTVGAGRVVKIIK 396          
The following BLAST results are available for this feature:
BLAST of EY710866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_XYLFA7.489e-1428.44Elongation factor Tu OS=Xylella fastidiosa GN=tufA... [more]
EFTU_WOLSU7.489e-1428.77Elongation factor Tu OS=Wolinella succinogenes GN=... [more]
EFTU_RICRS7.489e-1427.06Elongation factor Tu OS=Rickettsia rickettsii (str... [more]
EFTU_RICRO7.489e-1427.06Elongation factor Tu OS=Rickettsia rickettsii (str... [more]
EFTU_RICPU7.489e-1427.06Elongation factor Tu OS=Rickettsia peacockii (stra... [more]
EFTU_RICM57.489e-1427.06Elongation factor Tu OS=Rickettsia massiliae (stra... [more]
EFTU_RICAE7.489e-1427.06Elongation factor Tu OS=Rickettsia africae (strain... [more]
EFTU_RALSO7.489e-1428.57Elongation factor Tu OS=Ralstonia solanacearum GN=... [more]
EFTU_POLSJ7.489e-1428.90Elongation factor Tu OS=Polaromonas sp. (strain JS... [more]
EFTU_MYCUA7.489e-1427.27Elongation factor Tu OS=Mycobacterium ulcerans (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710866 ID=EY710866; Name=EY710866; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCCCACGCGTCCTCCCACGCGTCCGGTGACAACATGATTG
AGAGGTCTACCAACCTTGACTGGTACAAGGGTCCAACCCTGCTGGATGCT
CTTGACAATATCAATGAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCT
GCCACTCCAGGACGTGTACAAGATTGGTGGCATTGGAACCGTCCCAGTGG
GTCGCGTTGAGACCGGTGTGCTCAAGCCTGGTATGGTGGTGACATTTGGT
CCCTCTGGATTGACAACTTAGGTTAAGTCTGTTGAGATGCACCACGAAGC
TCTGCAGGAGGCCCTTCCGGGTGACAATGTTGGCTTCAACGTGAAGAACG
TTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGAT
GATCCGGCCAGGGAAGCTGCCAACTTCACTTCACAGGTCATCATCATGAA
CCATCCTGGCCAGATTGGAAATGGATATGCCCCAGTGCTTGACTGCCACA
CCTCCCACATTGCTGTCAAGTTTTCTGAGCTTGTGACCAAGATTGACAGG
CGATCTGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGAGA
TGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACCT
TTCTCGACTACCCACCCCTTGGTCGTTTTGCTGTTAGGGACATGCGTCAG
ACTGTAGCTGTTGGTGTGATCAAGAGTGTTGAAAAGAAGGATCCATCGGG
TGGCAAAGGCACCAAGTCTGCTGCCAAGAAAAGTGAGGAGTTTTTTTGGG
ATCATCTGCTATAGGTAGCCTTTATTTTCCCGGGTTAGGCAATTTTGCCA
GGTTTAGTTGTTTACGGGAAACTCATTTTAATTCTCGAATTGGGTTTAAA
TCATGAGTTTTTTTGGAAGTGGAAAA
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