EY710866

Overview
NameEY710866
Unique NameEY710866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESR (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-7) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 63/217 (29.03%), Postives = 103/217 (47.47%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*V--KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L +ALD+ I EP+R  DKP  +P++DV+ I G GTV  GRVE G+++ G  V       TT      VEM  + L E   G+N G  ++     D++RG V   SK         F S+V +++   + G  + P    +      + +++   I+   G E+      +  GD   +K+    P+ ++  L      RFA+R+  +TV  GV+  +
Sbjct:  192 LAEALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVGDEVEIVGIRATTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVL--SKPGSINPHTTFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIKMKVTLICPIAMDEGL------RFAIREGGRTVGAGVVAKI 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESM (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-4) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 63/217 (29.03%), Postives = 103/217 (47.47%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*V--KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L +ALD+ I EP+R  DKP  +P++DV+ I G GTV  GRVE G+++ G  V       TT      VEM  + L E   G+N G  ++     D++RG V   SK         F S+V +++   + G  + P    +      + +++   I+   G E+      +  GD   +K+    P+ ++  L      RFA+R+  +TV  GV+  +
Sbjct:  192 LAEALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVGDEVEIVGIRATTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVL--SKPGSINPHTTFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIKMKVTLICPIAMDEGL------RFAIREGGRTVGAGVVAKI 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_RHIEC (Elongation factor Tu 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 61/218 (27.98%), Postives = 105/218 (48.17%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L+ A+D+ I  P+RP D+P  +P++DV+ I G GTV  GRVE G++K G    +V   P+  TT V  VEM  + L +   GDN+G  ++ V    ++RG +    K    +    F ++  I+    + G  + P    +      + +++   +    G E+      +  GD   V +    P+ +E  L      RFA+R+  +TV  G++ S+
Sbjct:  189 LMAAVDSYIPTPERPVDQPFLMPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVGIRPTSKTT-VTGVEMFRKLLDQGQAGDNIGALIRGVNRDGVERGQIL--CKPGSVKPHKKFKAEAYILTK--EEGGRHTPFFTNYRPQFYFRTTDVTGIVTLPEGTEM------VMPGDNVTVDVELIVPIAMEEKL------RFAIREGGRTVGAGIVASI 389          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_PHOPR (Elongation factor Tu 1 OS=Photobacterium profundum GN=tuf1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.489e-14
Identity = 62/217 (28.57%), Postives = 104/217 (47.93%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L +ALDN I EP+R  D P  LP++DV+ I G GTV  GRVE G+++ G  + +       TT    VEM  + L E   G+NVG  ++     D++RG V   +K         FTS++ +++     G  + P    +      + +++   I+   G E+      +  GD   + +    P+ ++  L      RFA+R+  +TV  GV+ ++
Sbjct:  192 LAEALDNYIPEPERAIDLPFILPIEDVFSIQGRGTVVTGRVEQGIVRVGEEVAIIGIKETTTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVL--AKPGSITPHTTFTSEIYVLSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIAMTVTLIAPIAMDEGL------RFAIREGGRTVGAGVVATI 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_STRP1 (Elongation factor Tu OS=Streptococcus pyogenes serotype M1 GN=tuf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 60/219 (27.40%), Postives = 104/219 (47.49%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVE 733
            L+D +D+ I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++      +V          V  VEM  + L E L GDNVG  ++ V   +++RG V   +K         F  +V I++     G  + P  + +      + +++   I+  +G E+      +  GD   + +    P+ VE          F++R+  +TV  G++  +E
Sbjct:  195 LMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEIEIVGIKEETKKAVVTGVEMFRKQLDEGLAGDNVGILLRGVQRDEIERGQVI--AKPSSINPHTKFKGEVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM------VMPGDNVTINVELIHPIAVEQGT------TFSIREGGRTVGSGIVSEIE 397          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_SHIFL (Elongation factor Tu OS=Shigella flexneri GN=tufA PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_SHIDS (Elongation factor Tu OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_SHIBS (Elongation factor Tu OS=Shigella boydii serotype 4 (strain Sb227) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_SALTY (Elongation factor Tu OS=Salmonella typhimurium GN=tufA PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_SALTI (Elongation factor Tu OS=Salmonella typhi GN=tufA PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
The following BLAST results are available for this feature:
BLAST of EY710866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU1_SHESR7.489e-1429.03Elongation factor Tu 1 OS=Shewanella sp. (strain M... [more]
EFTU1_SHESM7.489e-1429.03Elongation factor Tu 1 OS=Shewanella sp. (strain M... [more]
EFTU1_RHIEC7.489e-1427.98Elongation factor Tu 1 OS=Rhizobium etli (strain C... [more]
EFTU1_PHOPR7.489e-1428.57Elongation factor Tu 1 OS=Photobacterium profundum... [more]
EFTU_STRP19.781e-1427.40Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_SHIFL9.781e-1430.52Elongation factor Tu OS=Shigella flexneri GN=tufA ... [more]
EFTU_SHIDS9.781e-1430.52Elongation factor Tu OS=Shigella dysenteriae serot... [more]
EFTU_SHIBS9.781e-1430.52Elongation factor Tu OS=Shigella boydii serotype 4... [more]
EFTU_SALTY9.781e-1430.52Elongation factor Tu OS=Salmonella typhimurium GN=... [more]
EFTU_SALTI9.781e-1430.52Elongation factor Tu OS=Salmonella typhi GN=tufA P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710866 ID=EY710866; Name=EY710866; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCCCACGCGTCCTCCCACGCGTCCGGTGACAACATGATTG
AGAGGTCTACCAACCTTGACTGGTACAAGGGTCCAACCCTGCTGGATGCT
CTTGACAATATCAATGAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCT
GCCACTCCAGGACGTGTACAAGATTGGTGGCATTGGAACCGTCCCAGTGG
GTCGCGTTGAGACCGGTGTGCTCAAGCCTGGTATGGTGGTGACATTTGGT
CCCTCTGGATTGACAACTTAGGTTAAGTCTGTTGAGATGCACCACGAAGC
TCTGCAGGAGGCCCTTCCGGGTGACAATGTTGGCTTCAACGTGAAGAACG
TTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGAT
GATCCGGCCAGGGAAGCTGCCAACTTCACTTCACAGGTCATCATCATGAA
CCATCCTGGCCAGATTGGAAATGGATATGCCCCAGTGCTTGACTGCCACA
CCTCCCACATTGCTGTCAAGTTTTCTGAGCTTGTGACCAAGATTGACAGG
CGATCTGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGAGA
TGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACCT
TTCTCGACTACCCACCCCTTGGTCGTTTTGCTGTTAGGGACATGCGTCAG
ACTGTAGCTGTTGGTGTGATCAAGAGTGTTGAAAAGAAGGATCCATCGGG
TGGCAAAGGCACCAAGTCTGCTGCCAAGAAAAGTGAGGAGTTTTTTTGGG
ATCATCTGCTATAGGTAGCCTTTATTTTCCCGGGTTAGGCAATTTTGCCA
GGTTTAGTTGTTTACGGGAAACTCATTTTAATTCTCGAATTGGGTTTAAA
TCATGAGTTTTTTTGGAAGTGGAAAA
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