EY710866

Overview
NameEY710866
Unique NameEY710866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU2_DESPS (Elongation factor Tu 2 OS=Desulfotalea psychrophila GN=tuf2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 60/217 (27.65%), Postives = 103/217 (47.47%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            L++A+D+ I EP+R  D+P  +P++DV+ I G GTV  GRVE G++K G  + +      + T    VEM  + L E   GDN+G  ++ V  +D++RG V   +K         F ++  I+      G  + P  + +      + +++   +    G E+      +  GD   V      P+ ++  L      RFA+R+  +TV  GVI  +
Sbjct:  194 LMEAIDSYIPEPERDVDQPFLMPVEDVFSISGRGTVATGRVERGIIKVGEEVAIVGVKDTVKTTCTGVEMFRKLLDEGRAGDNIGALLRGVKREDIERGQVL--AKPGTITPHTKFKAECYILGK--DEGGRHTPFFNGYRPQFYFRTTDVTGVVSLPEGIEM------VMPGDNVSVDATLITPIAMDAGL------RFAIREGGRTVGAGVISEI 394          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_SHISS (Elongation factor Tu 1 OS=Shigella sonnei (strain Ss046) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOUT (Elongation factor Tu 1 OS=Escherichia coli (strain UTI89 / UPEC) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOLC (Elongation factor Tu 1 OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOL5 (Elongation factor Tu 1 OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOK1 (Elongation factor Tu 1 OS=Escherichia coli O1:K1 / APEC GN=tuf1 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_ECOHS (Elongation factor Tu 1 OS=Escherichia coli O9:H4 (strain HS) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU1_ECO24 (Elongation factor Tu 1 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 65/213 (30.52%), Postives = 104/213 (48.83%), Query Frame = 2
Query:  110 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT*VKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            I EP+R  DKP  LP++DV+ I G GTV  GRVE G++K G  V     G+    KS    VEM  + L E   G+NVG  ++ +  ++++RG V   +K    +    F S+V I++     G  + P    +      + +++   I+   G E+      +  GD   +KM+ T   P+ ++  L      RFA+R+  +TV  GV+  V
Sbjct:  200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_ZYMMO (Elongation factor Tu OS=Zymomonas mobilis GN=tuf PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.277e-13
Identity = 66/223 (29.60%), Postives = 113/223 (50.67%), Query Frame = 2
Query:   86 TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGD--AGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSVEK 736
            +L+ A+D  I +P+RP DK   +P++DV+ I G GTV  GRVETG++K G    +V    +  TT V  VEM  + L +   GDN+G  ++  A  +++RG V   +K         F ++V +++     G  + P    +      + +++  +I       L ++ + +  GD  A  VK+I   P+ ++  L      RFA+R+  +TV  GV+ S+ K
Sbjct:  194 SLMAAVDEYIPQPERPLDKSFLMPIEDVFSISGRGTVVTGRVETGIVKVGEEVEIVGLRDTKKTT-VTGVEMFRKLLDQGQAGDNIGALLRGTARTEVERGQVL--AKPGSITPHTEFKAEVYVLSK--DEGGRHTPFFANYRPQFYFRTTDVTGEI------TLPEDVEMVMPGDNIAFGVKLI--APIAMDPGL------RFAIREGGRTVGAGVVSSIIK 397          
BLAST of EY710866 vs. ExPASy Swiss-Prot
Match: EFTU_YEAST (Elongation factor Tu, mitochondrial OS=Saccharomyces cerevisiae GN=TUF1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.277e-13
Identity = 66/224 (29.46%), Postives = 101/224 (45.09%), Query Frame = 2
Query:   89 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTT*VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN------HPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFLDYPPLGRFAVRDMRQTVAVGVIKSV 730
            LLDA+D  I  P+R  +KP  +P++D++ I G GTV  GRVE G LK G    +V    + L T V  +EM  + L  A+ GDN G  ++ +    LKRG V   +K    +      + + I++      H G  G  Y P +   T+ + V           R  KE+E     +  GD   ++     P  +E         RF +R+  +TV  G+I  +
Sbjct:  230 LLDAVDEYIPTPERDLNKPFLMPVEDIFSISGRGTVVTGRVERGNLKKGEELEIVGHNSTPLKTTVTGIEMFRKELDSAMAGDNAGVLLRGIRRDQLKRGMVL--AKPGTVKAHTKILASLYILSKEEGGRHSG-FGENYRPQMFIRTADVTVVM---------RFPKEVEDHSMQVMPGDNVEMECDLIHPTPLEVG------QRFNIREGGRTVGTGLITRI 435          
The following BLAST results are available for this feature:
BLAST of EY710866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU2_DESPS9.781e-1427.65Elongation factor Tu 2 OS=Desulfotalea psychrophil... [more]
EFTU1_SHISS9.781e-1430.52Elongation factor Tu 1 OS=Shigella sonnei (strain ... [more]
EFTU1_ECOUT9.781e-1430.52Elongation factor Tu 1 OS=Escherichia coli (strain... [more]
EFTU1_ECOLC9.781e-1430.52Elongation factor Tu 1 OS=Escherichia coli (strain... [more]
EFTU1_ECOL59.781e-1430.52Elongation factor Tu 1 OS=Escherichia coli O6:K15:... [more]
EFTU1_ECOK19.781e-1430.52Elongation factor Tu 1 OS=Escherichia coli O1:K1 /... [more]
EFTU1_ECOHS9.781e-1430.52Elongation factor Tu 1 OS=Escherichia coli O9:H4 (... [more]
EFTU1_ECO249.781e-1430.52Elongation factor Tu 1 OS=Escherichia coli O139:H2... [more]
EFTU_ZYMMO1.277e-1329.60Elongation factor Tu OS=Zymomonas mobilis GN=tuf P... [more]
EFTU_YEAST1.277e-1329.46Elongation factor Tu, mitochondrial OS=Saccharomyc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B04-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710866 ID=EY710866; Name=EY710866; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCCCACGCGTCCTCCCACGCGTCCGGTGACAACATGATTG
AGAGGTCTACCAACCTTGACTGGTACAAGGGTCCAACCCTGCTGGATGCT
CTTGACAATATCAATGAGCCGAAGAGGCCCTCAGACAAGCCCCTTCGTCT
GCCACTCCAGGACGTGTACAAGATTGGTGGCATTGGAACCGTCCCAGTGG
GTCGCGTTGAGACCGGTGTGCTCAAGCCTGGTATGGTGGTGACATTTGGT
CCCTCTGGATTGACAACTTAGGTTAAGTCTGTTGAGATGCACCACGAAGC
TCTGCAGGAGGCCCTTCCGGGTGACAATGTTGGCTTCAACGTGAAGAACG
TTGCTGTCAAGGATCTCAAGCGTGGTTTTGTTGCTTCCAACTCGAAGGAT
GATCCGGCCAGGGAAGCTGCCAACTTCACTTCACAGGTCATCATCATGAA
CCATCCTGGCCAGATTGGAAATGGATATGCCCCAGTGCTTGACTGCCACA
CCTCCCACATTGCTGTCAAGTTTTCTGAGCTTGTGACCAAGATTGACAGG
CGATCTGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAGAATGGAGA
TGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATGGTTGTTGAGACCT
TTCTCGACTACCCACCCCTTGGTCGTTTTGCTGTTAGGGACATGCGTCAG
ACTGTAGCTGTTGGTGTGATCAAGAGTGTTGAAAAGAAGGATCCATCGGG
TGGCAAAGGCACCAAGTCTGCTGCCAAGAAAAGTGAGGAGTTTTTTTGGG
ATCATCTGCTATAGGTAGCCTTTATTTTCCCGGGTTAGGCAATTTTGCCA
GGTTTAGTTGTTTACGGGAAACTCATTTTAATTCTCGAATTGGGTTTAAA
TCATGAGTTTTTTTGGAAGTGGAAAA
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