EY710865

Overview
NameEY710865
Unique NameEY710865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14
Identity = 42/129 (32.56%), Postives = 75/129 (58.14%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRV-VDLLYDAALVSSGFTPENPAELGSKIYEMLGMN 660
            F     ++KK L DK+  V IS  L+ SP +LVS  +G +AN ER+MKAQ     +  +F   +++ EINP HP+I+ L        ++++  +V   +LY+ + +++G++ +NP      IY+++ +N
Sbjct:  596 FKPLLSYLKKTLSDKLEKVVISKVLADSPSILVSNSWGVTANQERIMKAQAHQANAQPQF-NSKKIMEINPSHPLIKKLLNRLNEFGEEDETTKVSAHVLYETSALTAGYSIDNPTNFADFIYKLMMIN 723          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 41/129 (31.78%), Postives = 66/129 (51.16%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 663
            F     W+K  L D V  V++SNRL+ SP  L++  FG +  + RL +A      S  +   G+R+ E+NP+HP++  L  A ++  DD       +LLY  AL++ G   ++PA     + + L   L
Sbjct:  522 FADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGITPALARLYRA------SGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFAEILADRLARTL 644          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14
Identity = 41/129 (31.78%), Postives = 66/129 (51.16%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 663
            F     W+K  L D V  V++SNRL+ SP  L++  FG +  + RL +A      S  +   G+R+ E+NP+HP++  L  A ++  DD       +LLY  AL++ G   ++PA     + + L   L
Sbjct:  522 FADLLAWLKDTLSDHVKEVRLSNRLTDSPACLITDAFGITPALARLYRA------SGQDIPVGKRILELNPKHPLVTGLRQAHQDRADDPSVAETAELLYGTALLAEGGALDDPARFAEILADRLARTL 644          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_MYCLE (Chaperone protein htpG OS=Mycobacterium leprae GN=htpG PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.216e-13
Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRV---VDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 663
            F    +W+K+ L D V  V++S RL+ SP  L++  FG +  + R+ +A      S  +   G+R+ E+NP HP+I  L  A +N  DD    ++    +LLY  AL++ G   ENPA+    + ++L  ++
Sbjct:  531 FAGLVNWLKETLSDHVKEVRLSTRLTESPACLITDAFGITPALARIYRA------SGQDVPFGKRILELNPNHPLITGLQQAHENGGDDTHLRQLSETAELLYGTALLAEGGALENPAKFAGLLADLLSRSM 656          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.216e-13
Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 1
Query:  385 FGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNLQGKWAVPDAAEVQYPAATHHRPP 732
            +GW+ANMER+MKAQ + D S+  +M  ++  EINP+H  I  L   ++   +D     +V LLY+ AL+SS F  E P    ++IY M  + L      P A +    A T   PP
Sbjct:  292 YGWTANMERIMKAQALRDNSTTGYMAAKKHLEINPDHSFIDTLRQKAETDKNDKSVKDLVILLYETALLSSDFGLEGPQTHANRIYRMNKLGLGTDEDDPTADDTS-AAVTEEMPP 406          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HSP82_AJECA (Heat shock protein 82 OS=Ajellomyces capsulata GN=HSP82 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.588e-13
Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 1
Query:  310 LGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 663
            LGDKV  V +S++L  SPC + + +FGWSANMER+MKAQ + DT SM   R  R  E N                  D     +  LL++ +L+ SGFT E P+    +I++++ + L
Sbjct:  550 LGDKVEKVVVSHKLIGSPCAIRTGQFGWSANMERIMKAQALRDT-SMSSRRSSRPTEGN------------------DRTVKSITQLLFETSLLVSGFTIEEPSGFAGRIHKLVSLGL 648          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 43/127 (33.86%), Postives = 71/127 (55.91%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKA--QTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML 651
            +G    +IK  L D+V   ++S RL+ S C LV+ ++G +ANMER++KA  Q V D+        +RV E+NP+HPI++ +    +   +D       DLLYD AL++ G   ++P      + E++
Sbjct:  521 YGDLISFIKSHLEDRVKDARLSKRLTDSACCLVADEYGINANMERILKAMNQPVPDS--------KRVLELNPDHPIMKIMTEIFRENKEDARLTDYADLLYDQALLTEGSPIKDPLRFTRLVSELM 639          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_GEOUR (Chaperone protein htpG OS=Geobacter uraniireducens (strain Rf4) GN=htpG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.537e-13
Identity = 39/120 (32.50%), Postives = 71/120 (59.17%), Query Frame = 1
Query:  292 DWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML 651
            D++K++L DKV  V+ S+RL+ S C LV+ ++G +ANME+++KA       + +    +RV E+NP+HP++Q L++  +   ++        LLYD AL++ G    +P      + E++
Sbjct:  526 DFVKEQLKDKVKEVRFSSRLTDSACCLVADEYGLNANMEKILKAM------NQDVPESKRVLELNPDHPLMQVLSSIFEKDKENPRLADYCGLLYDQALLTEGSPVPDPLRFTRLVAELM 639          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTU (Chaperone protein htpG OS=Mycobacterium tuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDD--NDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 663
            F     W+++ L D V  V++S RL+ SP  L++  FG +  + R+ +A      S  E   G+R+ E+NP HP++  L  A ++  DD         +LLY  AL++ G   E+PA     + E L   L
Sbjct:  523 FADLLTWLQETLSDHVKEVRLSTRLTESPACLITDAFGMTPALARIYRA------SGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_MYCTA (Chaperone protein htpG OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=htpG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDD--NDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 663
            F     W+++ L D V  V++S RL+ SP  L++  FG +  + R+ +A      S  E   G+R+ E+NP HP++  L  A ++  DD         +LLY  AL++ G   E+PA     + E L   L
Sbjct:  523 FADLLTWLQETLSDHVKEVRLSTRLTESPACLITDAFGMTPALARIYRA------SGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
The following BLAST results are available for this feature:
BLAST of EY710865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
ENPL_DICDI1.875e-1432.56Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HTPG_MYCPA5.457e-1431.78Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_MYCA15.457e-1431.78Chaperone protein htpG OS=Mycobacterium avium (str... [more]
HTPG_MYCLE1.216e-1331.82Chaperone protein htpG OS=Mycobacterium leprae GN=... [more]
HS904_HUMAN1.216e-1337.07Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]
HSP82_AJECA1.588e-1337.29Heat shock protein 82 OS=Ajellomyces capsulata GN=... [more]
HTPG_PELPD2.074e-1333.86Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HTPG_GEOUR3.537e-1332.50Chaperone protein htpG OS=Geobacter uraniireducens... [more]
HTPG_MYCTU1.029e-1231.30Chaperone protein htpG OS=Mycobacterium tuberculos... [more]
HTPG_MYCTA1.029e-1231.30Chaperone protein htpG OS=Mycobacterium tuberculos... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710865 ID=EY710865; Name=EY710865; organism=Citrus sinensis; type=EST; length=893bp
CAGGCGGCAATGTTCAGCGTCTCGATCTGGTCCGGCGCGATAAATTCCAG
GGAGGCCTGGGCGTCGCGTTCGTCCGCCTGGGTTTTATAGGGCAGGCGCA
TGGCAATAAAGCGCGCCTCGTAGTCCTCGTCGCGCAGTTGCTCCACCGCC
AACTGGCACAGGCGCCCGGCGGTCAGTGAGTCGACCCACGCGTCCGAGAA
TTTTGTCGACATTAGCAAGGAAGACTTGGATCTAGGTGAAAAGAATGAGG
AAAAAGAGAAGGTGATGAAGGAAGAGTTTGGCCAAACTTGTGATTGGATT
AAGAAGCGATTGGGTGACAAAGTAGCTAGTGTTCAAATCTCAAATCGTCT
GAGCTCATCACCCTGTGTTCTGGTTTCTGCTAAGTTTGGTTGGTCAGCCA
ACATGGAGAGGTTAATGAAGGCTCAAACAGTTGGTGATACCTCAAGTATG
GAGTTCATGAGAGGAAGAAGAGTGTTTGAGATTAATCCTGAACACCCCAT
CATTCAAAACCTGAATGCTGCAAGCAAAAATTGCCCGGATGACAATGATG
CCCTTCGAGTTGTAGATTTATTGTATGATGCAGCTCTGGTCTCTAGTGGA
TTTACTCCTGAGAATCCGGCAGAGCTTGGCAGCAAGATATATGAAATGTT
AGGCATGAATTTACAAGGTAAATGGGCAGTTCCAGATGCTGCTGAGGTTC
AGTATCCAGCAGCAACCCATCACAGACCTCCCAACTTACGAAGCTGAAGT
GGTCGAGCCAGCAGAAGCCGGGGGTCAGAATGAGGAGCTCAAATTTTCCC
CTTTTTCTGGCTTTATTTACATTCATTAATTATTCACGAAGGGGCATTAG
ACTTAACTTTGGGAATGATGTAATGGTTTTCGGAGGGTTGGGG
back to top