EY710865

Overview
NameEY710865
Unique NameEY710865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBP (Chaperone protein htpG OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=htpG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDD--NDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 663
            F     W+++ L D V  V++S RL+ SP  L++  FG +  + R+ +A      S  E   G+R+ E+NP HP++  L  A ++  DD         +LLY  AL++ G   E+PA     + E L   L
Sbjct:  523 FADLLTWLQETLSDHVKEVRLSTRLTESPACLITDAFGMTPALARIYRA------SGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_MYCBO (Chaperone protein htpG OS=Mycobacterium bovis GN=htpG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.029e-12
Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDD--NDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 663
            F     W+++ L D V  V++S RL+ SP  L++  FG +  + R+ +A      S  E   G+R+ E+NP HP++  L  A ++  DD         +LLY  AL++ G   E+PA     + E L   L
Sbjct:  523 FADLLTWLQETLSDHVKEVRLSTRLTESPACLITDAFGMTPALARIYRA------SGQEVPVGKRILELNPSHPLVTGLRQAHQDRADDAEKSLAETAELLYGTALLAEGGALEDPARFAELLAERLARTL 647          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.344e-12
Identity = 41/127 (32.28%), Postives = 72/127 (56.69%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKA--QTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML 651
            +G    ++K++L ++V  V++SNRL+ S C LV+ + G +ANMER+++A  QTV ++        +R+ E+NP+HPI+Q +         +       DLLYD AL++ G    +P      + E++
Sbjct:  522 YGDLLSFVKEKLAERVKEVRLSNRLTDSACCLVADEHGLNANMERILRAMNQTVPES--------KRILELNPDHPIMQVMATLFGKDKTNPRLADYCDLLYDQALLTEGSPIADPLRFTRLVAELM 640          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: NADE_STRCO (NH(3)-dependent NAD(+) synthetase OS=Streptomyces coelicolor GN=nadE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.755e-12
Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = -1
Query:    9 VDSLTAGRLCQLAVEQLRDEDYEARFIAMRLPYKTQADERDAQASLEFIAPDQIETLNI 185
            VDS TAGRLCQLAVE+ R   +EA F AMRLP+  QADE DAQ +L FI PD++ T++I
Sbjct:   56 VDSTTAGRLCQLAVERARAAGHEALFYAMRLPHGVQADEDDAQQALSFIRPDRVLTVDI 114          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_GEOMG (Chaperone protein htpG OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=htpG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.293e-12
Identity = 42/128 (32.81%), Postives = 72/128 (56.25%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQ---NLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML 651
            +G    ++K++L  +V  V++S+RL+ S C LV+ + G +ANMER+++A       + +    +R+ E+NP+HP++Q   NL A  K  P   D     DLLYD AL++ G    +P      + E++
Sbjct:  522 YGDLLSFVKEKLDARVKEVRLSSRLTDSACCLVADEHGLNANMERILRAM------NQDVPESKRILELNPDHPLMQVMANLFARDKANPRLGD---YCDLLYDQALLTEGSPISDPLRFTRLVAELM 640          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: NADE_RHOSR (NH(3)-dependent NAD(+) synthetase OS=Rhodococcus sp. (strain RHA1) GN=nadE PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.994e-12
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = -1
Query:    9 DSLTAGRLCQLAVEQLRDEDYEARFIAMRLPYKTQADERDAQASLEFIAPDQIETLNI 182
            DS   GRL QLA  +LRDE ++A F+A+RLPY TQADE DAQ SL+FI PD+   +N+
Sbjct:   52 DSTLTGRLAQLAASELRDEGHDAEFVAVRLPYGTQADESDAQISLDFIKPDRSVVVNV 109          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: NADE_STRU0 (NH(3)-dependent NAD(+) synthetase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=nadE PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 40/62 (64.52%), Postives = 44/62 (70.97%), Query Frame = -1
Query:    3 DSLTAGRLCQLAVEQLRDE--DYEARFIAMRLPYKTQADERDAQASLEFIAPDQIETLNIAA 182
            DS  AGRL QLAVE+LR E  D   RFIA+RLPY  QADE DAQ +L FI PDQ  T+NI A
Sbjct:   52 DSTLAGRLAQLAVEELRQETGDQSYRFIAIRLPYGVQADEADAQKALAFIRPDQTLTINIKA 113          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: HTPG_MYCUA (Chaperone protein htpG OS=Mycobacterium ulcerans (strain Agy99) GN=htpG PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.911e-12
Identity = 39/132 (29.55%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  277 FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDD---NDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 663
            F     W+K+ LG++V  V++S RL+ SP  L++  FG +  + R+ +A      +  +   G+R  E+NP HP++  L  A  +  DD          +LLY  AL++ G  P++PA     + + L   L
Sbjct:  523 FADLLGWLKETLGEQVKEVRLSTRLTESPACLITDTFGITPALARIYRA------TGQDVPVGKRTLELNPTHPLVIGLRQAQASADDDAKKEAVSETAELLYGTALLAEGGAPDDPARFAELLADRLTRTL 648          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: NADE_PSEMY (NH(3)-dependent NAD(+) synthetase OS=Pseudomonas mendocina (strain ymp) GN=nadE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.670e-12
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = -1
Query:    3 VDSLTAGRLCQLAVEQLRDE--DYEARFIAMRLPYKTQADERDAQASLEFIAPDQIETLNIAA 185
            VDS TAGRL QL+VE+LR E  D + RFIA+RLP+ TQ DE DAQ SL+F+  D+  T+NIAA
Sbjct:   55 VDSTTAGRLAQLSVEELRAETGDTDYRFIAVRLPHNTQHDEHDAQDSLKFVNADEEATVNIAA 117          
BLAST of EY710865 vs. ExPASy Swiss-Prot
Match: NADE_RHOOB (NH(3)-dependent NAD(+) synthetase OS=Rhodococcus opacus (strain B4) GN=nadE PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.712e-12
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = -1
Query:    9 DSLTAGRLCQLAVEQLRDEDYEARFIAMRLPYKTQADERDAQASLEFIAPDQIETLNI 182
            DS   GRL QLA  +LR+E ++A F+A+RLPY TQADE DAQ SL+FI PD+   +N+
Sbjct:   52 DSTLTGRLAQLAASELREEGHDAEFVAVRLPYGTQADESDAQISLDFIKPDRSVVVNV 109          
The following BLAST results are available for this feature:
BLAST of EY710865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
HTPG_MYCBP1.029e-1231.30Chaperone protein htpG OS=Mycobacterium bovis (str... [more]
HTPG_MYCBO1.029e-1231.30Chaperone protein htpG OS=Mycobacterium bovis GN=h... [more]
HTPG_GEOSL1.344e-1232.28Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
NADE_STRCO1.755e-1262.71NH(3)-dependent NAD(+) synthetase OS=Streptomyces ... [more]
HTPG_GEOMG2.293e-1232.81Chaperone protein htpG OS=Geobacter metallireducen... [more]
NADE_RHOSR2.994e-1258.62NH(3)-dependent NAD(+) synthetase OS=Rhodococcus s... [more]
NADE_STRU03.911e-1264.52NH(3)-dependent NAD(+) synthetase OS=Streptococcus... [more]
HTPG_MYCUA3.911e-1229.55Chaperone protein htpG OS=Mycobacterium ulcerans (... [more]
NADE_PSEMY6.670e-1261.90NH(3)-dependent NAD(+) synthetase OS=Pseudomonas m... [more]
NADE_RHOOB8.712e-1256.90NH(3)-dependent NAD(+) synthetase OS=Rhodococcus o... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B03-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710865 ID=EY710865; Name=EY710865; organism=Citrus sinensis; type=EST; length=893bp
CAGGCGGCAATGTTCAGCGTCTCGATCTGGTCCGGCGCGATAAATTCCAG
GGAGGCCTGGGCGTCGCGTTCGTCCGCCTGGGTTTTATAGGGCAGGCGCA
TGGCAATAAAGCGCGCCTCGTAGTCCTCGTCGCGCAGTTGCTCCACCGCC
AACTGGCACAGGCGCCCGGCGGTCAGTGAGTCGACCCACGCGTCCGAGAA
TTTTGTCGACATTAGCAAGGAAGACTTGGATCTAGGTGAAAAGAATGAGG
AAAAAGAGAAGGTGATGAAGGAAGAGTTTGGCCAAACTTGTGATTGGATT
AAGAAGCGATTGGGTGACAAAGTAGCTAGTGTTCAAATCTCAAATCGTCT
GAGCTCATCACCCTGTGTTCTGGTTTCTGCTAAGTTTGGTTGGTCAGCCA
ACATGGAGAGGTTAATGAAGGCTCAAACAGTTGGTGATACCTCAAGTATG
GAGTTCATGAGAGGAAGAAGAGTGTTTGAGATTAATCCTGAACACCCCAT
CATTCAAAACCTGAATGCTGCAAGCAAAAATTGCCCGGATGACAATGATG
CCCTTCGAGTTGTAGATTTATTGTATGATGCAGCTCTGGTCTCTAGTGGA
TTTACTCCTGAGAATCCGGCAGAGCTTGGCAGCAAGATATATGAAATGTT
AGGCATGAATTTACAAGGTAAATGGGCAGTTCCAGATGCTGCTGAGGTTC
AGTATCCAGCAGCAACCCATCACAGACCTCCCAACTTACGAAGCTGAAGT
GGTCGAGCCAGCAGAAGCCGGGGGTCAGAATGAGGAGCTCAAATTTTCCC
CTTTTTCTGGCTTTATTTACATTCATTAATTATTCACGAAGGGGCATTAG
ACTTAACTTTGGGAATGATGTAATGGTTTTCGGAGGGTTGGGG
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