EY710863
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710863 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.297e-18 Identity = 52/96 (54.17%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 120 GAHMSNSDGAANGVSNGAI-----IDPQRQQPPGNGALA-VKKPP--SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 383 GA G A V+ AI + P+ + G +A V+KPP ++DRH+KV+GRGRRIRMP CAAR+FQLTRELGHKSDG+TI WLL+Q+E Sbjct: 28 GAAGGGGGGGAAAVAMSAIPMNSWLVPKPEPVEFFGGMAMVRKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSE 123
BLAST of EY710863 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.297e-18 Identity = 52/96 (54.17%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 120 GAHMSNSDGAANGVSNGAI-----IDPQRQQPPGNGALA-VKKPP--SKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 383 GA G A V+ AI + P+ + G +A V+KPP ++DRH+KV+GRGRRIRMP CAAR+FQLTRELGHKSDG+TI WLL+Q+E Sbjct: 28 GAAGGGGGGGAAAVAMSAIPMNSWLVPKPEPVEFFGGMAMVRKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQQSE 123
BLAST of EY710863 vs. ExPASy Swiss-Prot
Match: TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.694e-18 Identity = 42/62 (67.74%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 198 PPGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 383 PP + +K+ +KDRH+KV+GRGRRIRMP CAAR+FQLTRELGHKSDG+TI WLL AE Sbjct: 62 PPSSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAE 123
BLAST of EY710863 vs. ExPASy Swiss-Prot
Match: TCP6_ARATH (Transcription factor TCP6 OS=Arabidopsis thaliana GN=TCP6 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.098e-17 Identity = 38/53 (71.70%), Postives = 49/53 (92.45%), Query Frame = 3 Query: 225 KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 383 KK P+KDRH KV+GRGRR+R+P +CAAR++QLT+ELGHKSDG+T+EWLL+ AE Sbjct: 64 KKKPNKDRHLKVEGRGRRVRLPPLCAARIYQLTKELGHKSDGETLEWLLQHAE 116
BLAST of EY710863 vs. ExPASy Swiss-Prot
Match: PCF1_ORYSJ (Transcription factor PCF1 OS=Oryza sativa subsp. japonica GN=PCF1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.872e-17 Identity = 49/90 (54.44%), Postives = 59/90 (65.56%), Query Frame = 3 Query: 114 LPGAHMSNSDGAANGVSNGAIIDPQRQQPPGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 383 + A +SDGA P+R +P K P S DRHSKV GRGRR+R+P + AARVFQLTRELGH++DG+TIEWLLRQAE Sbjct: 32 IAAAEPPSSDGAT----------PRRVRPR-------KSPSSSDRHSKVAGRGRRVRIPAMVAARVFQLTRELGHRTDGETIEWLLRQAE 104
BLAST of EY710863 vs. ExPASy Swiss-Prot
Match: TCP11_ARATH (Transcription factor TCP11 OS=Arabidopsis thaliana GN=TCP11 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.904e-15 Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 3 Query: 132 SNSDGAANGVSNGAIIDPQRQQPPGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAE 383 SN + A+ + + G G ++ + +KDRH+KV+GR RR+ MP + AAR+FQLTRELGHK++G+TIEWLL QAE Sbjct: 11 SNFNAIASESRSQTQFGVSKSSSSGGGCISAR---TKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAE 91 The following BLAST results are available for this feature:
BLAST of EY710863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710863 ID=EY710863; Name=EY710863; organism=Citrus sinensis; type=EST; length=913bpback to top |