EY710849

Overview
NameEY710849
Unique NameEY710849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_SPIAU (Elongation factor Tu (Fragment) OS=Spirochaeta aurantia GN=tuf PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 68/192 (35.42%), Postives = 97/192 (50.52%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF 578
            K HIN+  IGHVD GK+T T  L   + G  K            MN         +D    E+ERGITI+    ++E+   +   +D PGH D++KNMITG +Q D A+L++ + +G        + QTREH LLA  +GV  ++   NKMD   P+      + +  EV   L   G++ EK PF+  S F
Sbjct:   10 KPHINVGAIGHVDHGKTTLTAALT--MYGAKKH-------GGKVMNYDD------IDNAPEEKERGITINTRHVEYESAARHYAHVDCPGHADYVKNMITGAAQMDGAILLVAADSG-------PEPQTREHILLAKQVGVANLVIFLNKMDLADPEL----VELVEMEVRDLLNLYGFDGEKTPFIRGSAF 175          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_PROMT (Elongation factor Tu OS=Prochlorococcus marinus (strain NATL2A) GN=tuf PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 64/193 (33.16%), Postives = 98/193 (50.78%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE 581
            K H+NI  IGHVD GK+T T         I K + ++ + EA +  +        +D    ERERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D       +   + +  E+   L    +  + +P V +SG +
Sbjct:   10 KPHVNIGTIGHVDHGKTTLTA-------AITKVLAKKGQAEAQDYAE--------IDGAPEERERGITINTAHVEYETEGRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEMIELVEMEIRELLTSYDFPGDDIPVVQVSGLK 177          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_PROM1 (Elongation factor Tu OS=Prochlorococcus marinus (strain NATL1A) GN=tuf PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 64/193 (33.16%), Postives = 98/193 (50.78%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE 581
            K H+NI  IGHVD GK+T T         I K + ++ + EA +  +        +D    ERERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D       +   + +  E+   L    +  + +P V +SG +
Sbjct:   10 KPHVNIGTIGHVDHGKTTLTA-------AITKVLAKKGQAEAQDYAE--------IDGAPEERERGITINTAHVEYETDGRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEMIELVEMEIRELLTSYDFPGDDIPVVQVSGLK 177          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_MYCGE (Elongation factor Tu OS=Mycoplasma genitalium GN=tuf PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 64/198 (32.32%), Postives = 100/198 (50.51%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGD 587
            K H+N+  IGH+D GK+T T  +   L    K    R+++               +DK   E+ RGITI+ A  ++ + K +   +D PGH D+IKNMITG +Q D A+L++ +T        S   QTREH LLA  +GV +M+   NK D  + +  +   + + +EV   L   G++ +  P +    +   EGD
Sbjct:   10 KPHVNVGTIGHIDHGKTTLTAAICTVLAKEGKSAATRYDE---------------IDKAPEEKARGITINSAHVEYSSDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSATD-------SVMPQTREHILLARQVGVPKMVVFLNKCDIASDEEVQ---ELVAEEVRDLLTSYGFDGKNTPIIYGSALKALEGD 182          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_LACF3 (Elongation factor Tu OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=tuf PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 71/205 (34.63%), Postives = 99/205 (48.29%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIEKVL 608
            K H+NI  IGHVD GK+T T  +   L        E +                 +D    E+ERGITI+ A  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ +T G          QTREH LLA  +GV+ ++   NK D           D +  EV   L +  +  + VP V    +   EGD   E+V+
Sbjct:   11 KPHVNIGTIGHVDHGKTTLTAAITKVLAAKGLAKAEDYSD---------------IDAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVEYIVVFLNKTDLVD---DDELVDLVEMEVRDLLSEYDFPGDDVPVVRGSALKALEGDPEQEQVV 190          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_DICDI (Elongation factor Tu, mitochondrial OS=Dictyostelium discoideum GN=tufm PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 65/188 (34.57%), Postives = 97/188 (51.60%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 563
            K H+N+  IGHVD GK+T T  +                K  ++    +FK    +DK   E+ RGITI  +  ++E+   +   ID PGH+ +IKNMITG +Q D A+L++ +  G  E       QTREH +L+  +G+  ++   NKMD   P        EIV+ EV   L + G+N ++ PFV
Sbjct:   36 KPHVNVGTIGHVDHGKTTLTAAIT---------------KTLSDRGLANFKSYAQIDKSPEEKARGITITASHIEYESATRHYAHIDCPGHQHYIKNMITGAAQMDGAILVVSAPDGPQE-------QTREHIILSREVGIPALVVFLNKMDNADPDLV-----EIVEMEVRELLSQYGFNGDETPFV 196          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_CLOAB (Elongation factor Tu OS=Clostridium acetobutylicum GN=tuf PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 66/187 (35.29%), Postives = 93/187 (49.73%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 563
            K H+NI  IGHVD GK+T T  +   L              A E   ++F Y  + DK   E+ERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV+ ++   NK D           D +  EV   L + G+  +  P V
Sbjct:   10 KPHVNIGTIGHVDHGKTTLTAAITTIL--------------AKEGKAKAFNYEEI-DKAPEEKERGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVEYIVVFLNKADQVD---DPELIDLVEMEVRELLNEYGFPGDDTPIV 171          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU2_MYXXD (Elongation factor Tu 2 OS=Myxococcus xanthus (strain DK 1622) GN=tuf2 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 65/198 (32.83%), Postives = 99/198 (50.00%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGD 587
            K H+NI  IGHVD GK++ T  +                K  A+    +F    ++DK   ERERGITI  +  +++T+  +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D       +   + +  EV   LKK  +  + +P +P   +   EGD
Sbjct:   10 KPHVNIGTIGHVDHGKTSLTAAIT---------------KVLAKTGGATFLAYDLIDKAPEERERGITISTSHVEYQTSNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDDIPIIPGSALKALEGD 182          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU1_MYXXD (Elongation factor Tu 1 OS=Myxococcus xanthus (strain DK 1622) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 65/198 (32.83%), Postives = 99/198 (50.00%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGD 587
            K H+NI  IGHVD GK++ T  +                K  A+    +F    ++DK   ERERGITI  +  +++T+  +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D       +   + +  EV   LKK  +  + +P +P   +   EGD
Sbjct:   10 KPHVNIGTIGHVDHGKTSLTAAIT---------------KVLAKTGGATFLAYDLIDKAPEERERGITISTSHVEYQTSNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDDIPIIPGSALKALEGD 182          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_THEM4 (Elongation factor Tu OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=tuf PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.353e-21
Identity = 66/187 (35.29%), Postives = 93/187 (49.73%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 563
            K H+N+  IGH+D GK+T T  +   L    +     +E+               +DK   E+ERGITI+IA  ++ET K +   ID PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  + V  MI   NK D       +   D +  EV   L K  +  + +P +
Sbjct:   10 KPHLNVGTIGHIDHGKTTLTAAITKYLSLFGRADYTPYEQ---------------IDKAPEEKERGITINIAHIEYETEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVNVPAMIVFINKTDMVD---DEELVDLVEMEVRELLNKYEFPGDDLPVI 171          
The following BLAST results are available for this feature:
BLAST of EY710849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_SPIAU2.568e-2135.42Elongation factor Tu (Fragment) OS=Spirochaeta aur... [more]
EFTU_PROMT2.568e-2133.16Elongation factor Tu OS=Prochlorococcus marinus (s... [more]
EFTU_PROM12.568e-2133.16Elongation factor Tu OS=Prochlorococcus marinus (s... [more]
EFTU_MYCGE2.568e-2132.32Elongation factor Tu OS=Mycoplasma genitalium GN=t... [more]
EFTU_LACF32.568e-2134.63Elongation factor Tu OS=Lactobacillus fermentum (s... [more]
EFTU_DICDI2.568e-2134.57Elongation factor Tu, mitochondrial OS=Dictyosteli... [more]
EFTU_CLOAB2.568e-2135.29Elongation factor Tu OS=Clostridium acetobutylicum... [more]
EFTU2_MYXXD2.568e-2132.83Elongation factor Tu 2 OS=Myxococcus xanthus (stra... [more]
EFTU1_MYXXD2.568e-2132.83Elongation factor Tu 1 OS=Myxococcus xanthus (stra... [more]
EFTU_THEM43.353e-2135.29Elongation factor Tu OS=Thermosipho melanesiensis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-093-H09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710849 ID=EY710849; Name=EY710849; organism=Citrus sinensis; type=EST; length=868bp
AGAAGACTCACATCAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAG
TCGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCG
TGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCAT
TCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGT
ATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTG
CACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTA
CCGGTACCTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACC
GGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGC
TTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACA
AGATGGACGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATT
GTGAAGGAGGTCTCTTCCTACCTGAAAAAGGTTGGATACAACCCCGAAAA
AGTCCCATTCGTGCCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGA
AGGTCCTACCCACCCTTTGAACTGGTAAAAAGGGTCCCAACCCTGGCTGG
ACGCTCTTGACAAAATCAAATGAACCCAAAAAGGGCCTCCAAACAACCCC
CTTCGTCCGGCCACTCCCAGGACTTGGACAAAAATTGGGGGGCTTGGAAA
CCCCCCCAATGGGGCCCCGTTTGAAACCGGGGGCCCCTCCACCCGGGGGA
GGGGGGGGGAAATTTTGGGCCCCCTCTGGGGATTCCACACTGGAGGTTAA
GTTCGGTGTGAAAACCCC
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