EY710849

Overview
NameEY710849
Unique NameEY710849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_DEIGD (Elongation factor Tu OS=Deinococcus geothermalis (strain DSM 11300) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20
Identity = 70/223 (31.39%), Postives = 107/223 (47.98%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIEKVLPTL*TGKKGPNPG----WTLL 659
            K H+N+  IGHVD GK+T T  + +    +D  V    EK A +           +DK   E+ RGITI+ A  ++ T   + + +D PGH D++KNMITG +Q D A+L++ S  G          QTREH LLA  +GV  ++   NK+D       +   + +  EV   L K  +  + +P +  S  +    +++   T     +G NP     W LL
Sbjct:   10 KPHVNVGTIGHVDHGKTTLTAAITFTAAAMDPTV----EKLAYDQ----------IDKAPEEKARGITINTAHVEYNTPARHYSHVDCPGHADYVKNMITGAAQMDGAILVVSSADGPMP-------QTREHILLARQVGVPYIVVFMNKVDMVD---DEELLELVEMEVRELLSKYEFPGDDLPVIKGSALQALEALQQNPKT----ARGENPWVDKIWELL 204          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_CHLL2 (Elongation factor Tu OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20
Identity = 70/208 (33.65%), Postives = 102/208 (49.04%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIEKVLPTL 617
            K H+NI  IGHVD GK+T T  +   L            K+   + +R F     +DK   ERERGITI  A  +++T K +   ID PGH D+IKNMITG +Q D A+L++  T G          QTREH LLA  + V  ++   NK+D   P+      + +  E+   L +  +  + +P +    +   +GD   EK +  L
Sbjct:   10 KPHVNIGTIGHVDHGKTTLTAAITSVLA-----------KQGLAL-QRDFGS---IDKAPEERERGITISTAHVEYQTKKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPEL----LELVELELRELLTEYNFPGDDIPIIKGSALKALDGDPEGEKAIMEL 191          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_BORGA (Elongation factor Tu OS=Borrelia garinii GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20
Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 521
            K H+N+  IGHVD GK+T T  +      ++K             + ++ KY  + D    E+ RGITI+    ++ET   +   +D PGH D+IKNMITG +Q D A+L++ + +G        + QT+EH LLA  +G+K++I   NK+D   P+  +    E+++ V  Y
Sbjct:   10 KPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_BORBZ (Elongation factor Tu OS=Borrelia burgdorferi (strain ZS7) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20
Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 521
            K H+N+  IGHVD GK+T T  +      ++K             + ++ KY  + D    E+ RGITI+    ++ET   +   +D PGH D+IKNMITG +Q D A+L++ + +G        + QT+EH LLA  +G+K++I   NK+D   P+  +    E+++ V  Y
Sbjct:   10 KPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_BORBU (Elongation factor Tu OS=Borrelia burgdorferi GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20
Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 521
            K H+N+  IGHVD GK+T T  +      ++K             + ++ KY  + D    E+ RGITI+    ++ET   +   +D PGH D+IKNMITG +Q D A+L++ + +G        + QT+EH LLA  +G+K++I   NK+D   P+  +    E+++ V  Y
Sbjct:   10 KPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_BORAP (Elongation factor Tu OS=Borrelia afzelii (strain PKo) GN=tuf PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20
Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 521
            K H+N+  IGHVD GK+T T  +      ++K             + ++ KY  + D    E+ RGITI+    ++ET   +   +D PGH D+IKNMITG +Q D A+L++ + +G        + QT+EH LLA  +G+K++I   NK+D   P+  +    E+++ V  Y
Sbjct:   10 KPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPELVELVEVEVLELVEKY 161          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU3_STRCO (Elongation factor Tu-3 OS=Streptomyces coelicolor GN=tuf3 PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20
Identity = 71/198 (35.86%), Postives = 99/198 (50.00%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGD 587
            K H+NI  +GHVD GK+T T         I K + ER      +    SF     +D+   E  RGITI+IA  ++ET   +   +D PGH D++KNM+TG +Q D A+L++ +  G          QT EH LLA  +GV  ++   NK DA   + +    D +  EV   L   GY  + VP V +SG    EGD
Sbjct:   10 KPHLNIGTMGHVDHGKTTLTA-------AITKVLAERGAGSTTQYV--SFDR---IDRAPEEAARGITINIAHVEYETDTRHYAHVDMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRELLTAHGYGGDAVPVVRVSGLKALEGD 184          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU2_STRRA (Elongation factor Tu-2 OS=Streptomyces ramocissimus GN=tuf2 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.664e-20
Identity = 69/198 (34.85%), Postives = 99/198 (50.00%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 587
            K H+NI  IGH+D GK+T T         I K + +RF       +   F     +DK   ER+RGITI IA  +++T   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D       +   + +  EV   L +  +  + VP V +S     EGD
Sbjct:   10 KPHVNIGTIGHIDHGKTTLTA-------AITKVLHDRFP------DLNPFTPFDQIDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKTDMVD---DEEILELVELEVRELLTEYEFPGDDVPVVKVSALRALEGD 184          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_THEEB (Elongation factor Tu OS=Thermosynechococcus elongatus (strain BP-1) GN=tuf PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.174e-20
Identity = 60/193 (31.09%), Postives = 97/193 (50.26%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE 581
            K H+N+  IGHVD GK+T T  +   L    K    ++++               +D    E+ RGITI+ A  ++ET K +   +D PGH D++KNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK+D       +   + +  E+   L +  +  ++VP +  SG +
Sbjct:   10 KPHVNVGTIGHVDHGKTTLTAAITMTLAAQGKAQARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAMP-------QTKEHILLARQVGVPSIVVFLNKVDMVD---DEELLELVELELRELLNEYEFPGDEVPIIRGSGLK 177          
BLAST of EY710849 vs. ExPASy Swiss-Prot
Match: EFTU_THEAB (Elongation factor Tu OS=Thermosipho africanus (strain TCF52B) GN=tuf PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.174e-20
Identity = 65/187 (34.76%), Postives = 92/187 (49.20%), Query Frame = 3
Query:    3 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 563
            K H+N+  IGH+D GK+T T  +   L    +     +E+               +DK   E+ERGITI+I+  ++ET   +   ID PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  + V  MI   NK D       +   D +  EV   L K  +  + +P V
Sbjct:   10 KPHLNVGTIGHIDHGKTTLTAAITKYLSFFGRADYTPYEQ---------------IDKAPEEKERGITINISHIEYETETRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVNVPAMIVFINKTDMVD---DEELIDLVEMEVRELLNKYEFPGDDLPVV 171          
The following BLAST results are available for this feature:
BLAST of EY710849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_DEIGD1.664e-2031.39Elongation factor Tu OS=Deinococcus geothermalis (... [more]
EFTU_CHLL21.664e-2033.65Elongation factor Tu OS=Chlorobium limicola (strai... [more]
EFTU_BORGA1.664e-2033.53Elongation factor Tu OS=Borrelia garinii GN=tuf PE... [more]
EFTU_BORBZ1.664e-2033.53Elongation factor Tu OS=Borrelia burgdorferi (stra... [more]
EFTU_BORBU1.664e-2033.53Elongation factor Tu OS=Borrelia burgdorferi GN=tu... [more]
EFTU_BORAP1.664e-2033.53Elongation factor Tu OS=Borrelia afzelii (strain P... [more]
EFTU3_STRCO1.664e-2035.86Elongation factor Tu-3 OS=Streptomyces coelicolor ... [more]
EFTU2_STRRA1.664e-2034.85Elongation factor Tu-2 OS=Streptomyces ramocissimu... [more]
EFTU_THEEB2.174e-2031.09Elongation factor Tu OS=Thermosynechococcus elonga... [more]
EFTU_THEAB2.174e-2034.76Elongation factor Tu OS=Thermosipho africanus (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-093-H09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710849 ID=EY710849; Name=EY710849; organism=Citrus sinensis; type=EST; length=868bp
AGAAGACTCACATCAACATTGTGGTCATCGGCCATGTCGACTCTGGAAAG
TCGACCACCACCGGACACTTGATCTACAAGCTTGGTGGTATTGACAAGCG
TGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCAT
TCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGT
ATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTG
CACCGTCATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTA
CCGGTACCTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACC
GGTGGTTTTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGC
TTTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACA
AGATGGACGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATT
GTGAAGGAGGTCTCTTCCTACCTGAAAAAGGTTGGATACAACCCCGAAAA
AGTCCCATTCGTGCCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGA
AGGTCCTACCCACCCTTTGAACTGGTAAAAAGGGTCCCAACCCTGGCTGG
ACGCTCTTGACAAAATCAAATGAACCCAAAAAGGGCCTCCAAACAACCCC
CTTCGTCCGGCCACTCCCAGGACTTGGACAAAAATTGGGGGGCTTGGAAA
CCCCCCCAATGGGGCCCCGTTTGAAACCGGGGGCCCCTCCACCCGGGGGA
GGGGGGGGGAAATTTTGGGCCCCCTCTGGGGATTCCACACTGGAGGTTAA
GTTCGGTGTGAAAACCCC
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