EY710686

Overview
NameEY710686
Unique NameEY710686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_SALEP (Malate dehydrogenase OS=Salmonella enteritidis PT4 (strain P125109) GN=mdh PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.022e-30
Identity = 74/119 (62.18%), Postives = 86/119 (72.27%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVV 361
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G K VV
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGEKGVV 249
[Close]
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_SALDC (Malate dehydrogenase OS=Salmonella dublin (strain CT_02021853) GN=mdh PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.022e-30
Identity = 74/119 (62.18%), Postives = 86/119 (72.27%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVV 361
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G K VV
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGEKGVV 249
[Close]
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_SALA4 (Malate dehydrogenase OS=Salmonella agona (strain SL483) GN=mdh PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.022e-30
Identity = 74/119 (62.18%), Postives = 86/119 (72.27%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVV 361
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G K VV
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGEKGVV 249
[Close]
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_ENTS8 (Malate dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mdh PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.022e-30
Identity = 72/116 (62.07%), Postives = 85/116 (73.28%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVS--QGFEG 346
            KK G YD  +L GVT LD++R+NTFVAE+ G  P E+DVPV+GGH+GVTILPLLSQ+ P  + T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV   QG +G
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKKPAELDVPVIGGHSGVTILPLLSQI-PGVNFTDQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQG 247
[Close]
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_YERPY (Malate dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mdh PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.865e-30
Identity = 71/122 (58.20%), Postives = 87/122 (71.31%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLS 370
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G   VV  S
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGESNVVECS 252
[Close]
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_YERPS (Malate dehydrogenase OS=Yersinia pseudotuberculosis GN=mdh PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.865e-30
Identity = 71/122 (58.20%), Postives = 87/122 (71.31%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLS 370
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G   VV  S
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGESNVVECS 252
[Close]
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_YERPP (Malate dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=mdh PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.865e-30
Identity = 71/122 (58.20%), Postives = 87/122 (71.31%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLS 370
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G   VV  S
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGESNVVECS 252
[Close]
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_YERPN (Malate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mdh PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.865e-30
Identity = 71/122 (58.20%), Postives = 87/122 (71.31%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLS 370
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G   VV  S
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGESNVVECS 252
[Close]
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_YERPG (Malate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mdh PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.865e-30
Identity = 71/122 (58.20%), Postives = 87/122 (71.31%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLS 370
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G   VV  S
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGESNVVECS 252
[Close]
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_YERPE (Malate dehydrogenase OS=Yersinia pestis GN=mdh PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.865e-30
Identity = 71/122 (58.20%), Postives = 87/122 (71.31%), Query Frame = 2 
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLS 370
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G   VV  S
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGESNVVECS 252
The following BLAST results are available for this feature:
BLAST of EY710686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDH_SALEP6.022e-3062.18Malate dehydrogenase OS=Salmonella enteritidis PT4... [more]
MDH_SALDC6.022e-3062.18Malate dehydrogenase OS=Salmonella dublin (strain ... [more]
MDH_SALA46.022e-3062.18Malate dehydrogenase OS=Salmonella agona (strain S... [more]
MDH_ENTS86.022e-3062.07Malate dehydrogenase OS=Enterobacter sakazakii (st... [more]
MDH_YERPY7.865e-3058.20Malate dehydrogenase OS=Yersinia pseudotuberculosi... [more]
MDH_YERPS7.865e-3058.20Malate dehydrogenase OS=Yersinia pseudotuberculosi... [more]
MDH_YERPP7.865e-3058.20Malate dehydrogenase OS=Yersinia pestis (strain Pe... [more]
MDH_YERPN7.865e-3058.20Malate dehydrogenase OS=Yersinia pestis bv. Antiqu... [more]
MDH_YERPG7.865e-3058.20Malate dehydrogenase OS=Yersinia pestis bv. Antiqu... [more]
MDH_YERPE7.865e-3058.20Malate dehydrogenase OS=Yersinia pestis GN=mdh PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-086-A10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710686 ID=EY710686; Name=EY710686; organism=Citrus sinensis; type=EST; length=806bp
TTTCAAGAAAGTTGGCACTTATGATCCAAAGCGACTTTTGGGAGTCACAA
TGCTTGATGTTGTTCGAGCCAATACTTTTGTGGCTGAGGTCTTGGGTCTT
GACCCCAGGGAAGTTGATGTTCCAGTTGTGGGAGGTCATGCTGGGGTTAC
TATTTTACCTCTTTTATCTCAGGTTAAACCATCATGCTCTCTCACCCCTA
CAGAAATTGACTACTTGACAGATCGTATCCAGAATGGTGGTACAGAAGTA
GTTGAGGCAAAAGCTGGACCTGGTTCGGCCACTCTATCCATGGCATATGC
TGCTGCCCAAGTTTTGCCAATGCTTGTCTCCCAAGGTTTTGAAGGGGGGA
AGCCAGTGGTTAATTTGAGTGTGACTACCTGGCTTCTACGGGGAACTGAA
ACTTCCCTTTTCTTTGCCACCCAAGGGACGGGCTTGGACGTGGCTGGGAA
TTGGAGGAAATTAACCCACATTGGCCCATTTGAATAGAATAAGAAAAGGG
CTGGTTTTGGAAAAAGGCAAATAAAAAAGTTTGCCGGGAATCATTTATAT
AAAAGGAGTCCCTTTTTTTCTACGAGAATTCGTGTAACCTCATTCCCAAT
GGGGGCCAAAAAGAAAAAGGGGTGGGGCTTTTTTGTGTGGTCGGCGTCCA
AACTTAACCCAAGAGAATTAGTTTTCCCCCCACACAAAACAAAAAAGCGG
AACAGTTTTCCTTTCTTTTTTCCCCTAATTTCCCATAAAGGAGTATATTA
TATGTTGAGAAACTCAAAAAGCCTAAACAAGAAACCGTATATCATAATTT
TCTCTC
back to top