EY710686

Overview
NameEY710686
Unique NameEY710686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_MORJA (Malate dehydrogenase OS=Moritella japonica GN=mdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.098e-29
Identity = 74/138 (53.62%), Postives = 96/138 (69.57%), Query Frame = 2
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLSVTTWLLRGTETSLFFA 418
            K+ G YD ++L G+T LDV+R+ TFV+E+ G+   +V+VPV+GGH+GVTILPLLSQVK     T  EI  LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G + +V     T++  G+E + FFA
Sbjct:  133 KQAGVYDKRKLFGITTLDVIRSETFVSELKGISLADVEVPVIGGHSGVTILPLLSQVK-GVEFTAEEIATLTPRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGEEGIVE---CTYVDGGSEHATFFA 265          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_KLEOX (Malate dehydrogenase (Fragment) OS=Klebsiella oxytoca GN=mdh PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.098e-29
Identity = 71/119 (59.66%), Postives = 86/119 (72.27%), Query Frame = 2
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVV 361
            KK G YD  +L GVT LD++R+NTFVAE+ G    +V+VPV+GGH+GVTILPLLSQ+ P  S +  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G K VV
Sbjct:   98 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKSSSDVEVPVIGGHSGVTILPLLSQI-PGVSFSEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RAMQGEKGVV 214          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_SHEPA (Malate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=mdh PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.658e-29
Identity = 77/138 (55.80%), Postives = 93/138 (67.39%), Query Frame = 2
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLSVTTWLLRGTETSLFFA 418
            K  G YD  RL GVT LDV+R+ TFVAE  GL+  +V VPV+GGH+GVTILPLLSQV+   S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AA +    LV +G +G   VV  +   ++  G+E + FFA
Sbjct:  133 KNAGVYDKNRLFGVTTLDVIRSETFVAEAKGLNVADVKVPVIGGHSGVTILPLLSQVE-GVSFTDAEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLV-RGLQGEANVVECA---YVDGGSEHAEFFA 265          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_SHEHH (Malate dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=mdh PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.696e-29
Identity = 78/138 (56.52%), Postives = 93/138 (67.39%), Query Frame = 2
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLSVTTWLLRGTETSLFFA 418
            KK G YD  RL GVT LDV+R+ TFVAE   L+  +V VPV+GGH+GVTILPLLSQV+   S T  EI  LT RIQN GTEVVEAKAG GSATLSM  AA +    LV +G +G   VV  +   ++  G+E + FFA
Sbjct:  133 KKAGVYDKNRLFGVTTLDVIRSETFVAEAKDLNVADVKVPVIGGHSGVTILPLLSQVE-GVSFTDAEIAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLV-RGLQGEANVVECA---YVDGGSEHTEFFA 265          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_SALCH (Malate dehydrogenase OS=Salmonella choleraesuis GN=mdh PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.696e-29
Identity = 73/119 (61.34%), Postives = 85/119 (71.43%), Query Frame = 2
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVV 361
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+V V+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +  +G K VV
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVLVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV-RALQGEKGVV 249          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_PSEHT (Malate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=mdh PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.696e-29
Identity = 70/115 (60.87%), Postives = 83/115 (72.17%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEG 346
            FKK GTYD KR+ G+T LDV+R+  FVAE+ G+D   V VPV+GGH+G TILPLLSQV+   S T  E+  LT RIQN GTEVV AKAG GSATLSM  AAA+    LV +G +G
Sbjct:  132 FKKAGTYDAKRVFGITTLDVIRSEAFVAELKGVDVATVKVPVIGGHSGTTILPLLSQVE-GVSFTDEEVAALTPRIQNAGTEVVNAKAGGGSATLSMGAAAARFCMSLV-KGLQG 244          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_COLP3 (Malate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=mdh PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.696e-29
Identity = 71/115 (61.74%), Postives = 83/115 (72.17%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEG 346
            FKK GTYD  RL GVT LDV+R+  FVAE+ GLD   V VPV+GGH+G TILPLLSQV+   + +  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+    LV +G +G
Sbjct:  132 FKKAGTYDAARLFGVTTLDVIRSEAFVAELKGLDVATVKVPVIGGHSGTTILPLLSQVE-GATFSDEEVAALTPRIQNAGTEVVEAKAGGGSATLSMGAAAARFCMSLV-KGLQG 244          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDH_ERWCT (Malate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=mdh PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.136e-28
Identity = 65/102 (63.73%), Postives = 79/102 (77.45%), Query Frame = 2
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQ 310
            KK G YD  +L GVT LD++R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQV    S +  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPQDINVPVIGGHSGVTILPLLSQVS-GISFSEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAAR 233          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHM_FRAAN (Malate dehydrogenase, mitochondrial OS=Fragaria ananassa GN=MMDHI PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.136e-28
Identity = 67/101 (66.34%), Postives = 74/101 (73.27%), Query Frame = 2
Query:    5 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAA 307
            KK G YD K+L GVT LDVVRA TF A   G+   EV+VPVVGGHAG+TILPL SQ  P  +L+   I  LT R Q+GGTEVVEAKAG GSATLSMAYA A
Sbjct:  158 KKAGVYDEKKLFGVTTLDVVRAKTFYAGKAGVPVAEVNVPVVGGHAGITILPLFSQATPKANLSDDYIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGA 258          
BLAST of EY710686 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.483e-28
Identity = 76/142 (53.52%), Postives = 91/142 (64.08%), Query Frame = 2
Query:    2 FKKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGPGSATLSMAYAAAQVLPMLVSQGFEGGKPVVNLSVTTWLLRGTETSL-FFATQ 424
            FKK G YD K+L GVT LDVVRA TF A    +   EV+VPV+GGHAGVTILPL SQ  P  +L+   +  LT R Q+GGTEVVEAKAG GSATLSMAYA A      + +G  G   V+  S     ++ T T L FFA++
Sbjct:  160 FKKAGMYDEKKLFGVTTLDVVRARTFYAGKANVPVAEVNVPVIGGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACL-KGLNGVPDVIECS----YVQSTITELPFFASK 296          
The following BLAST results are available for this feature:
BLAST of EY710686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDH_MORJA5.098e-2953.62Malate dehydrogenase OS=Moritella japonica GN=mdh ... [more]
MDH_KLEOX5.098e-2959.66Malate dehydrogenase (Fragment) OS=Klebsiella oxyt... [more]
MDH_SHEPA6.658e-2955.80Malate dehydrogenase OS=Shewanella pealeana (strai... [more]
MDH_SHEHH8.696e-2956.52Malate dehydrogenase OS=Shewanella halifaxensis (s... [more]
MDH_SALCH8.696e-2961.34Malate dehydrogenase OS=Salmonella choleraesuis GN... [more]
MDH_PSEHT8.696e-2960.87Malate dehydrogenase OS=Pseudoalteromonas haloplan... [more]
MDH_COLP38.696e-2961.74Malate dehydrogenase OS=Colwellia psychrerythraea ... [more]
MDH_ERWCT1.136e-2863.73Malate dehydrogenase OS=Erwinia carotovora subsp. ... [more]
MDHM_FRAAN1.136e-2866.34Malate dehydrogenase, mitochondrial OS=Fragaria an... [more]
MDHM1_ARATH1.483e-2853.52Malate dehydrogenase 1, mitochondrial OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-086-A10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710686 ID=EY710686; Name=EY710686; organism=Citrus sinensis; type=EST; length=806bp
TTTCAAGAAAGTTGGCACTTATGATCCAAAGCGACTTTTGGGAGTCACAA
TGCTTGATGTTGTTCGAGCCAATACTTTTGTGGCTGAGGTCTTGGGTCTT
GACCCCAGGGAAGTTGATGTTCCAGTTGTGGGAGGTCATGCTGGGGTTAC
TATTTTACCTCTTTTATCTCAGGTTAAACCATCATGCTCTCTCACCCCTA
CAGAAATTGACTACTTGACAGATCGTATCCAGAATGGTGGTACAGAAGTA
GTTGAGGCAAAAGCTGGACCTGGTTCGGCCACTCTATCCATGGCATATGC
TGCTGCCCAAGTTTTGCCAATGCTTGTCTCCCAAGGTTTTGAAGGGGGGA
AGCCAGTGGTTAATTTGAGTGTGACTACCTGGCTTCTACGGGGAACTGAA
ACTTCCCTTTTCTTTGCCACCCAAGGGACGGGCTTGGACGTGGCTGGGAA
TTGGAGGAAATTAACCCACATTGGCCCATTTGAATAGAATAAGAAAAGGG
CTGGTTTTGGAAAAAGGCAAATAAAAAAGTTTGCCGGGAATCATTTATAT
AAAAGGAGTCCCTTTTTTTCTACGAGAATTCGTGTAACCTCATTCCCAAT
GGGGGCCAAAAAGAAAAAGGGGTGGGGCTTTTTTGTGTGGTCGGCGTCCA
AACTTAACCCAAGAGAATTAGTTTTCCCCCCACACAAAACAAAAAAGCGG
AACAGTTTTCCTTTCTTTTTTCCCCTAATTTCCCATAAAGGAGTATATTA
TATGTTGAGAAACTCAAAAAGCCTAAACAAGAAACCGTATATCATAATTT
TCTCTC
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